TCONS_00035249 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035249
Unique NameTCONS_00035249
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2807

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035249 ID=TCONS_00035249|Name=TCONS_00035249|organism=Clytia hemisphaerica|type=transcript|length=2807bp
ttagcattgaaataaagaaaaaaactacAGAAGGCAATTTAATTTggttt
tggtgaaaacttggtTAATTTAATGGTCAATGGCAACAAAGTCGGAGTAT
TCGTTGGGTTGAAGAATTATCTCCAGAGATGGATCACATTTTGGTCTCGA
CATTCGCGTTGCATCCTGGACAACTCTTGATCAAGCGTGGTGATATCAAG
TTGGGAATCTTTGAACTTATCAGATCCTTGGAAATCTTGCTCATCACCAA
ACAATCGTGAATTCATTTCCACCAATCGGCTGTTTACATCTTGTTCCTGT
ATGaaatgtTGAGATTCAATATCGTCAGTCTACTGCTGGTATTCGTAGTT
GTTATACACCATGTAAACGCCCTGTTAGGAGGGCGTGGTCGCGGGAGATT
ATTTGGTATCCATGGTTACATCAATGATGATACTCAGCTACCATCTTGGC
TCGCAGAGCATCACCGAAGAATGGCTCAAAGAGAAATGGAACTGGAACAA
GAGAAAATTGAAGAATCGATCGGTGTTCTTTTAGAACAAGGCGAATTTTA
CGAGAGCCGAGGACATGGAAAATTATTCGGAGTGGAAGAAGGCGAAGATA
ATTCGTTGATTGTGAGTATAGCAGGTGCGGATCAAGATGAAAATTTAGAC
AAAAAAAGCTCCATAGTGGGTAAAGATACGTCTAAGAGTACTGATGTGGA
GAATAAACCATTAATATCAGGAACTGAAAATTCTACGAGATTAGAGATAG
GGACTctggaaattggaaaattggcaGATACTGGTAATTCAGGTGACAAT
TATAAGAACTTGACTGGTACTGATGACAAGGGAATGACANAGTAATTCAG
ATGACAATTATAAGAACTTGACTGGTACTGATGACAAGGGAATGACATCC
ACATTTGGTGAAAAGCTTACGACTGAAAGTGGGGCGTTGCCAGATGGAGT
TAAGGAACACGGTAAcgataaacatttagaaaacAATCAAGATGATCAAA
GGAAGTTCCCAAAGGAAACAAATTCGATTATTTCTGATAGAGGTATGAAA
TCTTTGATTAACGAGAAAATTAACCCAATTACcgatgaaaaaaagtcaaa
gaacAGTTATGATAAATTAGATAATGGTCCTATGAAGTCATCGTCACCAA
CGCATaagaaaaatgttaagaaataCAAAGCAAATGTGAGTACTAGTCCT
CAGCCTCCTAAAGAAAAGAAACCGATTGATCGAAATAGTTCAAAATTGAC
CAATGACGTTGGTGGACTTCAGGGGACGAAAAAAGTGGAGAAATCGAAAC
CAAGAATGGTCAAATTACGTGGACGAGGAAAATTATTTGGCATACTTGGT
ATTCGAATAAAGGAAGTTGAATGGTCGAAATATAAATTTCGTCGTGGTAG
AAGATTACCATGATTTTAAGGtttaaaattaagaatatatttACTTTCTC
AAACTTGTACATCTTTCCTTAATAAAAACAAGAGTGACgttatcaaaaat
agaaaattttggggCATGCTCCcttgaaatttgttttaatgATTCAATCC
AAGGAATAACTCCACCAAATAGCACAccgctatgcaaacgtcataattat
tacttttaacattttaccgaaattcaatcccacaatacttttcatcatga
ttcgtaatgcgtgcaagttattacttttgtattgtcaataagtgtaATTG
ACTTGCAAAAGCATAATTAGtgcaaaggatgatgggattaaaactcggac
aaacagtaattttgatgtctatttttagaatcactgTGGTATGCTATTTC
AGACCTATACCTCTTTAAAGTGTCTTTCTCATAAGGGGTCTTACCCAGGC
CGTTACTTTAAGCGAGCATCATCAATTCAATcaaataccccccccccctt
ttcaaTTCAGCTAGTTATGCCtactttgaaaaatatattgggTAAGGCAG
GTGTAAAAAACTTAGTCAAATTTTGTTTGTAGGGAGAtagatttattttt
ataataaaaaatatatgattttgtcAAAGCccttgtaaaaaaatatttat
acagcgtaaaataaaaatcaccttgcaaataaaaaaaataaaagtgaaat
aaaatttagaaaatatgttTCAAATTTGGTATCGAAAATTGTCCCCGTAA
ttcaatcttttctttgttAATAAATGTCTGTCTTTGGACTCCAGGCCCTA
GTTTTAACAACTGAGACCTCCGACCACCCATCTGTGGTTGGCTTGTCGGC
GGCGGTGACGTACGATACTAGAGTCAATACCGGCTGCTCTATGTTTGTCA
TGTATATCAGTTTTTAATCGGTCTTCCGTGAGTTTTAGCATGCCAATATT
TCGTTCAACAGCCTGTAGAGACGCATCTAGCCCGTGATTTCCTTCGATAA
TATGCTGTGCTTCTTTAAGATGAGTTCCTGGGTGTCGTTGGTAGCACTTC
ACTTGAGGGCGGTCAAGGCGTTCTCGTGTCGTCAAGTCACTGGCTGAGAC
AGGTccctttttaaagaaataatgttCAATCAAAATTAACGTTAAGTATT
TAATATGGAGCTCTCATCCTTTAGTTGATTTTGAAGTTTGAAGGGATCAG
TTTGTTTGAGAATTTTGATCCCTACTCTCGGGACCCTAATAAGCGTCCca
ccccgctaattaattttttcgaaaattttctacccaggacattcttattc
caattCCCCCGtatttgaaagttccctcttttgccctagaTTCTGCTGTA
TTTAGcctcctttttaaaaatttcccacccagaatatttttattccaacc
ggtgggg
Run BLAST on NCBI

protein sequence of TCONS_00035249-protein

>TCONS_00035249-protein ID=TCONS_00035249-protein|Name=TCONS_00035249-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MLRFNIVSLLLVFVVVIHHVNALLGGRGRGRLFGIHGYINDDTQLPSWLA
EHHRRMAQREMELEQEKIEESIGVLLEQGEFYESRGHGKLFGVEEGEDNS
LIVSIAGADQDENLDKKSSIVGKDTSKSTDVENKPLISGTENSTRLEIGT
LEIGKLADTGNSGDNYKNLTGTDDKGMTX
Run BLAST on NCBI

transcript from alignment at sc0001278:45907..62811-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035249 ID=TCONS_00035249|Name=TCONS_00035249|organism=Clytia hemisphaerica|type=transcript|length=16905bp|location=Sequence derived from alignment at sc0001278:45907..62811- (Clytia hemisphaerica)
TTAGCATTGAAATAAAGAAAAAAACTACAGAAGGCAATTTAATTTGGTTT TGGTGAAAACTTGGTTAATTTAATGGTCAATGGCAACAAAGTCGGAGTAT TCGTTGGGTTGAAGAATTATCTCCAGAGGTAAGATTATATATTACAAAAA TAATATTAGATGCTAGAAATTTGCCTGAGTCATTTTTTAAGGTGTTAATC TAAGATCTAATGATGAGATCAAACCCTGATGAGATTGGACTTGGATTAGG ATCCTCTTTCGTAAAAACTTTTTAAATTTTTCCTACCTGATCCAACTTCC GTTGCAACTCGTCCCTTGTTTTCTCCGTGTTATGCAATTTCTCTTCATAT AGCTTAGCGTCTCGTTGATGTTTCTCAATCATTGATTCTTGTCTGATTTT CTCCAGATTCCATTCTTGCTCTTTGCTGCCCAATGAATTCAATTCATTCC TCAAATCGCTGATGATTTTAACATCCTTATCCAAATGTTGTTGAATGTTA CTTTTGTCAATATTTGTATCTTGAAGTTTGCGTTGCATAGCTTTGATTTC ACGCTTCAAATATTGTTCACTTTCTACTAAGCTATTTAAACGATCGGTCG AACATGTCAAATCTTCTTTTAAGGATTCAACCTCATGAAGTAAAGAAACT TCCCGGACTGATTGGCATTCTGAAGTCTCCTCGAATTTCTTTGTCAAGGT CTCATTAATCAAATTCAATTGCTCAATTTTGTTCCCCATATCTCCGACCT CTTTCTTCAGTTTGAGATTTTCCTCTAAAATTGCATTACTTCTGAAAGTT GAATTCTCTTGTCGATTCTCATCTCCAGCCCCCTTCATCCTCAAATCTTC TATTCCCACAAATTTCTGACTGATGATTTCTTCCAGGCATAATCCCCCAT CTATCTCTTTGATAATCGGTATCAACGATTTTGGAATCAGAGGTTTTTCT TCATTGTTTAAATACTCATACAAAGATCCACCTATCTTATGTTTCAACAT TCCATCCCTTTTTGAAGCTTCCAATAATTCATTTTGCAGCATTTCAACTT TAGCCTGTTCATCAAGCTTTGCCTTCAAATCTGCAGCATTCTCTTCCTTC AAATGTGTAATCTGTTCATTCTGCCAATTGGAAAGACTTTTCAGCTCTTT AATATAAGCTTCCAGGGTTCTTTCCTCCAAGCACTGTTTCATTTCAAACA TAGGTGAGCCTTCTTTTACTTCACCAGGAGTAAACAACAACTGATGTAGA TCCTGACCAACAGTTTTGACCAGATCTTCATTTTCATCATCCTGTATCTT CAAACTCTTCAATTTATCTTGCAATAAATCTTCCTCAAAACCTAACTGAT CTTTCTGATCTCCCACAGCTCTCTCTTCTTCATAACATTGCCTCAACTTC TCAGTGATTTCGTCCTTTCGATGGCTCTGGTAACACTTAGTCAACGCTTC GTCGATGCCCTTCGTTTGCTTGAGTATTTCTTCCCGTTGATCAAGCAGTT CTTTCAAACTCTGTTTCTCTACAGCATTTGAACCATCAATATCAACACCA TTATCAACAATTGTTGTTTTGCATTCTTTAAGAACCTCCAGAGTTGCTTT ATCCATATATTCCTTATTCACCAATCCTCCAATCTCCTCTTCAATTGATG CAAAATAAACATGGATATGTGAATCAATATCGTCCAGCTTTTTCTCGAGA ATGGTTTTCGTTTTCTTGTGCTCTTTTAACGAATTATTCTTTTCTTCGTC ATTTTGTTTTGAAACTTGTTTGGTCAGATCTGATAATTTGTTCTCCAGTG ATTTTCGTTTAACCAGTAGATCCAAATTCTCTTGTTGCTCAATCAAAGCT TTCTTCTTTTCTTCTAGTTGTGTCTTCAACTCTCTCATATGCTGAAAAAG AAAACAGGTCAGGAATCTGAGCTATAATTCTGAATGTTAGGATTTATAAC TGAGCCGCCCAAAAAACAAAATCTTGAAAAGGGACAAATTTGGAGAGAGA AGAATCAATTGCATTCAAACCAGAAAGAAAATACGTGAGATTGGTGTGAT TTTTTAACCATTTGGAATACTAAAATAGGGATCGAATATCTCTTGAATGC TAATTTGGGGATTTCTAATTCAAAATATTAATGTGAGATCAGAGGGGATG TTTATAAAACCTCAATGCTGATAGAACGTAATTGTAGTTTTCCAATGCTG ACATTAAAATACAGAACGTTTCGACGTTACAGTTTTAGGTCAATTCGTTT TGGGCCAAAAGGGTCAGTGACATAGTTTCTTGGAAAATGAAAAAATCTAG ACTAAATTGTTTACCTGCCCTTGGCCGCCACCTCCAATTTTAATGGAACT CTCGATAATCTCTTTTTCCTCTTGCAAAGAACGTAATGCTTTCTTCATTG ATTCTAATTTCAAACGTTTCTCAAGTTGTCTGATTTCTTGTAAATGGTGT GACTCTGGTGGCTCCTCAAATGAAATCAACTCTTCTGTGTTTCCTCTTAG ATGGATCACATTTTGGTCTCGACATTCGCGTTGCATCCTGGACAACTCTT GATCAAGCGTGGTGATATCAAGTTGGGAATCTTTGAACTTATCAGATCCT TGGAAATCTTGCTCATCACCAAACAATCGTGAATTCATTTCCACCAATCG GCTGTTTACATCTTGTTCCTGTATGGTAAGATATTATTTTGATAATTATT TATTTAGCATAAGTTGCATTGAGTTGCAGGAGGCTTTGAAGCCTTTTTTC GCAACTATAGATGCTTTCAAAGAGCGCCCCGTCAGTACCTTGGACTGACT ATCCAATTCCCCTCACATTGCATGGGTTGATCCAGGCGAAGGTTCATTCA CTTGCCAAGTGAACCTCTACAATTGGGAATCGAACCCCAGTCTTCGTGCA GCAACCAAGTTCAACGACTCTACCACAGCGCATTTTCCATAAAAGAATTT AACTAAATTAAGGGGTTCTGCGTCAAGGGGCTGCCCCTCAGAAAAAATTA TTTTCATTGATGAATATCATTACTCACCCAGAAATTGAACCTACCTGATT CACAATATCTCGTAGTTGATCTTCATTTCCCTCAATTTTACCCTCTGTCA TTTCTTCTCTTTTCTTCTGTAAAACAAACAATTCTTTTAGCACGTGATCA CGTTCTTCCAAATACATTGTGAAACTAGTTCGACTTGATGTACTTCGAGG TGAAAAACTACGTTGCGGTGACTCTACACATCCTTGATCCAGATAATTTG ATGTCACAATACTTTCATCAATCACCTCCAGTTGTTGAGCTAGCTCATTC TTTTTCTCAACTAATTTTCGTCTTCTGATTGATGTCACATCTTTGTCCGC CATTTCCCGTTCAATTAGAAAGAGCTGATTCAGCATTCCGTCTCGCTCTT CCAAAATCGAGTTCAATTTACGAGCAGCCGTATTTTTCGAAGACGAGTGA TCAATCAAACGTTCTTTAGAGTTTGGTTTTCCAACTTCTGGGCTATGGCT CAAAACTGCTTTATCGTAGTTTTGAATAATGGATTTAAGTTCACCTTCAA TTTTTTCAGTGGTAATTGAAATCTCTTCGAAATCACTTAGATTTGGGTTT GCATTTCGTTTGACCTTTCGGTTCAGTCTTCTTTGCATTTCAACCAACTG ATTTAAATTCTTAATCTTCTCCAACAAATTTCCCAGCTTATTTTCATTCA GTTTCTTTAGCTCTTGCAATTTTTCCAAATCTTTTACTTCAATTTTTCTC TCTTGAAAAGATAGCATATTTTTCTTTAAATCTTCTAAGCGCTCAATATT TTCCCTCGTTTCACGGACAGCTTTTATCGATGTCTCCGTAGGTTCTCCAA CAAAGTCGGCAACTATTAATGCCTGTTGTAGCTCCTCTTGATCTCTCATA AAGCTAAAGGCATTAGCAGTCGTTGCCAGTAGATCATAAGCTTCCAATTG ACTATCAGAATCTAAATGTGGTATTGAATCCAACTTTGCCAATATCTCGT CCACTTGCATGAGAATGTTGACATCGATACTTTCCAAGACTTCATTCATT TTCTNCGTCCACTTGCATGAGAATGTTAACATCGATACTTTCCAAGACTT CATTCATTTTCTTGATTTTTCCTTTCTCCTGTGAAGAATGTTGTAAAACC TGAAAAAAATATAGAGAAGAATGACCACTTTCTCAAATTCCAATTTAGTA AGTTTGCGAACGCAGTCGAGGGCCATCCGAATGTTATCTTTAGCTGTCGT CCCAAAGGTAGGGGAGAGGGCCACTCCCTTCGTTGAATTTCTTAGGATTG ATTGGGATCACAATAGGGCTGGACTTATTGGTTTGCCGCCACCCGACTCT ATATTTTAGATGTGGGTCGGTCGGTCGGTCGGAAAAAATTATAACATTTA TAAAAGTTCTGTTCACATTTTGGTAATTTCGAAAGAAAATGGTCGAGGTA GCACGTGCAAATACGGTAAAGGTTTTGATCTGAAGAAAAATATTCTTTCT TTGAAATGGCAATAAAATGTTTTCAGTTTCGAGGTAAAGTAGGTCGGGTG ACGGCATGCCAAAATCTTAGGGTTCAGGTAGAGTTCTGTCCACGCTTTTT TATTCAGTAAATATCTTTGCCGGTTTGCCTGCAGAAGTAGCGGGAATGCG CCGGGAAATTTTTGCCGGATATGAGAAAGTTTAGTCACCATGGTTATTCG CCCGTTGAATGATAAAGAAAGAACAAACCTGTTTGATATTATCGTGAACA GATTTTCGTTCTTTAACTAATCTTTCCAATTCACACTCTTCGTGAAGTTT TGTACCACCAACAATCTGGTCGTCTTTTTTGTCCAACTCTGTCACAATCT GCTGCAAATCCTCAATCTCAATACAATCTGCCAGTTTCACCTCCAAATCC TAATAAAAGTTTGTTTGAAATGGTAAAATAATATTATGATAAATGTTGAC GTATAAATTGTTTTCCTTATTATCAGATTTAAAATGTTCTTAAAACTTTC TAAAGTTGCTCACTTATTGACTTAAAAGGGATTAATATACAGCGTGTCCC AAGAAAATTGGACAAATTTTTATGTAAAATAAAACCCTCAAAACTTTTTA TCTAAACTGGGTTCAGAATAATGACACATTGTAGGCCTTTCCTAAGACAT TTCTAAAATCTGAGGTAGGGGTTGAACTTATGTTATAAAATTTAGTTTAT TTAACCTTTTTGACGTTTTGTAGCTGTTGTAATCGTTGTTGCAATAACAC TTCGTGGTCTTCTATCTCCTCGTTGATTTCACCAAGTCTTTTCATCAAAC CATTCTTCTCATTTTGAGCATTCTCTTCGTCTCCAAGGGCTAACAACCTT TTCATGACCTACAAAAGAAAAAATTAAGGTTTTACCTGTAAATCAAAATG GTAGCTGGTGGTCCGTTTTAATATCTAACGTCAAAACAGAAACATTCAGA AAAAAGCAAACAGGAAATTTGTACACGTTTTCTTTTTTAATAAGAATAAA CTATATAAGAACATAAGGCTTCAATGGCAAAAATGTTAAGAACACTCACA AAATGGTGAAAATAAGAACATGTGTTAAGAACATTTTTAGGCTTAAAACT AAAAAAGTTAAGAACATTCGAAGGCTTCAAAAATTTTGGATATTCTTATT AAAAAAACGTGTAATAGCTCATCTACTGTTTCACGATAAATATTTGATAA TACATAGTGGTATTTACCATAGTTAATGTGGTGACTGAAAATTCAACAAT CACCAATAAAGCGATTATTGTACAAAATGATTTAGAGAAAACCGCACCGC TAGAATTTTTTACCTAACTTTTTTTTGGTTTATTATCTAGTCGCCATGAA ATGTTCATCACTCATTCCCTATGCCTATGTAGTAGATTTGCAGCCTGCAT GTGAGATTTAAGGTCTATAGCTCAGATCTAAAATATGGAAGTTTTAATAA AAAGTACGTTAATAAATGTTTTTTTTAATCACCTTTTATAAACAAATAAA AAAAATACCTCGTCTTTCTGTTGTCCCAGTCTTTTCAATTCCACATTTTC CAATCCCTCGACATGTGGTCCATTCATTTTGTATTCAGACAGCTCCTCTA AGTCCGCTTCTACTTGTTGTAAATCCTCCACCACACCTTTTAGACAAGTT CCCAACTTCTGTTTCTCTTCTTTACTCACTTTCTCTTTATTCTCCCAATT TGTGTTCATAGCTTCTTCTAATTTCTGTCGCATTTTGATTCGAACCAAAC TAATAAAATAATTCAATCTTTTATTCGCCGTAGCCATCATTCGATTCACA TTCGTAGCCTTCTTGTCTAAAATTTGTCCCGTGATTTCTGTACATTTTTC ACCCATTGTCGTTTGACCACGCAAATCAACTAACTCATCAATTTGTTGTA AACATTCAACATCATCATTAAGCAATAGCACTTCATGTTGTGTTCGATCG CGTTCGACCAACAAATTCTTTAAGGCTACAGACACATTATGATAACTTTT CTCCCGGTTTACACCACAAGCAGTTTCCTTGAATTTCTTAACCGCTTCAG TTTTCAAATTAGTCAGAGTTTCAATTGCACCACTCTTATATTCCATATTC TGCACACCTTTAGCCGTCAATGTTTTCATCAATTTGCTCATCTCCTTTGT GATCTCAATGGCATCATCTTTTTGCTTTCTTACTGGTTCACGCCGCACCC TTTTCTCAAGGTCTTTTACACCCCGGGATAGTTTCTTACAATCATCTTCT ATACTTGCATAATCATAATATTGAACACCTCTCCCCCGTAGTGTTTCAGT CACGTCATTTAATCTTCCTTCAGTATCAACGATTTTCTCATTCAAGAAAT CATTCAGTCCAACACCAGTGGGGGAGTGCATATCAAATTGCACTTCTTCA ATGTTCTCCATCGTACCACTTCCACCAATACTTGACTCATACCCCTCACT TGTGATAATTTCTTGGATTTTATATTCGGCATCTAAAAGATGCTTTGACA GCTCCTCTTTATCTCTTAAAATTTGGTCAATTTCTTCATCACTCGGTGCC TTATAACAAGACCCGTTCACAAGTCCTAGCTTTTGTTTACTAATAAAAGG TCCAAGTTTTTGTAAGCTTTTTCGTAAATTTCCAATACGACTTGTTACAT CACCGGCTAAATCATTATCGACATCCAGGCTTGATAAATAATGCTGATCT GATACTTTCTCCTCTAAACGGTTGATGTGTTTATCAACCTCGATCATCCA ATCATCATTTGCAGTCTTCCCTTTTTCCTTTACTGGGTAAACGAGTTTAT TCGTAATCTGCTTATTAATCACTCTGACATCAGCATCAAGATCCTGTTTC TGTATTTTAAGGACTTTCTCAGCTTCAACCAACCTTTGTTTTCGTTCTTT CAGCTCTTTAAGTTCTTTAATAATGTCTTGGTACTTCGAGTTCATTTCAC CCTTTTCCTTCACAACTCTGATCAACTCCTCGTGTAGCTTCTCTTTGACT CCACTATCAACACACTGGACATCTGGTAGAATCCCATATACTCTCTCCAA AGCCTCACGTTCATTCTTGGCAGTCTTCAATTCTCCAATCTCCTTTTCGT AATCAACCAAGATCTCTTCAAGATGTTTATCACAATAATGAACCATGTCA ACTGCCTTCACACCTAAATGATTAACACCTATAAAGTCTGTATCAAACGT TTCTAAACTTTTGATCAGTTGTCGACCAATTTTTGGTTCGATTTCTGACA TCTCTGGTAAAACAGCGTAAGATGGATATTGATCAATTTCACCAGAAGCA TCGCTACCTTTCAACCATTTTATTTGTTCTTCAAGTAAGACTTTGTTATT TTTCGATAATCGAGTCATTCGATATCTCAAATATGGATCGGACACAAAAT GCGATAGAACTTCGTTTTCTTTTTCTCGGACATCAAACAAACAATCGACA ACTGCTTCGAGTCTATCCTTATCGATTCCTCTCCCCAATGATTCATTTTG AAGGTTCTCGAGAATCTGATTTCTCGGTAAGTCTCGATTAGCCCCGGTTA AAAGTTTCTCAAAGATCTCAATCGATAAATTTTTCTCGTTTATCAACGAT TCGGTTAATTTTTTCAATTTATTCTTCGATTCCTCCATCTCTTTACATTT GTGAAATAAAGTATTTAATTTCCTTTGTAGCTTGTTTTCCGAATTTCTTT GACATTCTGAATAATGGTTGTCTGCCACCTCCATATATCTCCTCCGTAAC GGTTCAAGCTCATCGATGATACTTTGATCAAGGTGTTCAGACCTTCCTTG TTGTATATATTCGATCAGTCGACCCTTCTCCAGTCTCCCGTCTTTTGATT CACGGCTTTCCAAATAGTTATCCGCAAGTTCATTTGCTTTTTCATCCAAG AAAGAGTCTTGAATCTCATTTTCCAGTAAAGCAATTGTCGATTGAATCTC CCTAAAGTCATGTTCGTTTTGAACAGTTTTATATTCTCGATTCACTAGGT CACGTTCTTTCAAATAATGATGTTTAGCCGTTTCTCTTATGTCAGCAGAC ACCGCTTGAGCGACTCCATCAAAGTCTATTCTCTCATCGATAATATCAAC TTGTACCCCCGTCTGGATCATGTTAACGGCTTGAGTTTGGCTGGACACAG TTGTAAATCCAGGGGGTGTTAACTCATCTTCTTTTTCTTCTGCAAATGAT AATGATGTTTCTAACATCTTCATTTTCTTTTTGAAGTTTGCGATCATGTC GTCCGTTTTTGTTTTGTATTTTCGTTCGTTCGTCTCTCGGTCTTTCAAAA ATTCACGGACCATGCTGTTTCGTTCCTCCATAATCTCAAAGGAAACCTGA AACATGACGGGATGGTGTTAAAAATCTATTGTGCTGGAAAACTTAGAATA CCCTGTGTCATAGACCCGGTGGGACCCAACAGAACACTGTGTCGTCGATA GTCGTTAGTTGGAAGATTGCAATAAACTTCCCACTTGAAGAGGAAACTGA ATTCTCATTCCTCTTCAAATTGAATAGAAAATAGTATGTAACGATGTACG AATCCTATTAAATAGGCTAAAAAACAGGGTATACTCTTGTAAGGTGTATA GCAGTATGAATATCTTTTTAACATTTAGCTTTTTAGCATTTAGCTGAAAT TGTCAAGGGAAGGATAGGATTTGCTCAAGTTGATCGTTACCACTTATGAC AACCGACTACCGACCCCCTTTTAATCATACACCCCTTTCTCACAGACCAG GTAGGATTCTTTCAGCCAGTGGGGGTGGAAATAACGGACCAAAACTCGAT AGGGATTGATATTTCTATGTTCATTTTGGCTGACAATTTCAATTTCATTG TTTTCGAGCCAGAAAATTCATTGGGATTTAAAAATTAGCAGAATATTTAG ATTTACTTATAGCGGGTACAAAAGAGTATAATTTTCCACTAGGGTAGATA TTTTGGCCAATTCTTCCAGTAAGAAGGGGTCTCAGTGGGTCTGTGAGAAG AGAGAGTAATCAGTAAAACCTACAAACCTCCATTTGATGGTCGATTTCTT TCATCAGGCGATTTGAATCTTTGATCGCTTCTTCAGGGTTCTCCTTCTCT TTGCTCAACTTATCAATCTCCATGGTGATGTCCGAAATATCCATGCTGTT GTCCGATGTAATGCTTTCTATCGACATCAATGATCTAGAAAAAATCAATT TAATGTAAATTAATGATTCCTATCCAACTTTCACTTGTCTCTCTAAGTCG CATTGTTCCTCGTGGTGTTATACTATGGACATCGTTGATATATAGAGAGC GATAATGTAAAGGTTTTGCCTAANAAAAAGACAAATTTAATGTAAATGTT TATTTAACAATAAGTAGTTAAATCGTAGTTTAATTTTAAATCGTCTAAAT CACTTATTCTGCCTGCGGTACTACCGGGGCGTCCCGCCTGCAAGTAGCCT TACTTCTCACTTGGTTCCGTGCGATATTGGCTATACTCTCAAAGCACAAA CAAGGTTGAAATTAAATATTTGTGTATACTTCGAAAAAAACATCAGAGCT ACAGCACACAAATCATAAGAATACTTTTCTTCTAAGAGGCTCCAGCCTGA TTGAGAATTTAATGAGATTACTTTTCATTTTAGGTGGTGTTACTGGATCT TGAAGTTTTAGCAGATATTTCAGCTTCATCAGCAGGCCCACCTCGTTCCC AGGGCTCCACCTTATACGAAGTCACAAATACACCTTCACAAAAACACACA TTGAATTCCTATTTTACCAAATNGTATGTGAACGCCAAACTTAATTGGAA AATATCTCAATCTATTCTACTCCCCTCCAAACAGATGAACGAATTTGGAA ATTAAATTAAAGATTTCTATCCAACTTTCACTTGTCTCTCCAAGTCGCAG TGTTCCTCGTGGTGTTATACTATGGACATCGTTGATATATCCCTGGTAAA AATTCTTGAAAAGTTCTTGAAAAGATCTTATCAAGAAACTTTGCTTATTC TTTTTCAGTTTCTTACTACGAACGTGCCAAGATCTTTCANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCCCGGCTGGGGGTTGAACCCACAACCTTTGTGCACC GTAGACGGATGCTCTACCACTGCACTACGGTCGCTGACGAAATCTCACTA CTATCCCCGTTCAGTTATTGAATAAGGGCCGAAAGCTTCGCTCGAGTGAC AGCATTCAACTGATGACCTCGTGAATACTTCCCATTAATCAACTATTTCA TTAATACAGTCAATGATAACAAACACACAAAAGAAAAACCACTTATCGTA TTTCGAAGCTGCCCAAAAACTGCTTCGTAAATACTATCCTTAAGATTGCT CTCCTTGAGTCTAAAGACTCCTTCTTATGAAAAACAATCATAACCCGAAA TTCACGTGTTTTTAAAATTCTTAACCCAAACTTGATAAGAACCACTATGA ATCCTAAAGCTTCTTTGCACATAATAGTTAGTTAAGATTTGGAAAGTCTC TTTTTAAAAACTTTACAAGTTACGCAAAGAATCTTAAAATATTTAATGGC TTAAGATTTCGTAAGATTCTACTTAAGAACTTAATAAGAAATAATAATTA TCTTACTATAAATACGCGGGAAGAATCTTGACAATTCTTAGCGATTTCTT TACAAGATCTTTAAAGATATTTTTGCTGGAAGAAATTTTCAAGATTGCCT AAGAATCGTTGTAAGATCTTACAAAGATTTTATAAGATTCTTACTTGTTA AAGATCTTGAAAGATCTTCGACGATCTTTTCAGATCTTATCAAGAATTTT TACCAGGGATAGAGAGTGATAATGTAAAGGCTTTGCTTAACCCTTAGACC ACGGGGGACGCGTATATGCGTCCGAAACAAGCCAAAATACTGAGTCTCAG ACTTGAGGCTATATTTCCTGACCACTTGAACCACATAAACCGAATGCTTT TAGAAAGAGTATGAAATAGCTTTCCGATGGTACCAAAACCATCTTCTAAA TCAAAGGCTACAAGCTTTTATGGCACTTTAAAGTTTTGAGTTTCAAAAAA AAAAATTGAAAAATTTCAACTTTTTCAAAAAAAACAGCGCGCGCAAAAAG TTAATTGGTTGGAAAAGACAAATTATGATATATTAGAGCTCTACACATTC AACTTTCATTTATCTCTTAGTTGCAATAGCGAGTTTATGTATGCTCGGGT TTCTGTGACGGAGACGGTTAGTTTATATTTTCTCTAGACCCTAATTGGCT GAGGATGGCGGTGAATCAGTGATTCTACCACCATCGATTTTGCGGTTCAA AACTGCTCGCAAAACTGCAGGTTGGTATCGAGTTGTTTCATTCATACTCC GTTCTCGAAAAGATAAAATATAAATTCGCTGATTTTCCGTAAAGTGGTGT AACGACCGTGCCAAGCAATTGAATCTTTCGTGAAAAATCATGTCTCTCAA CTTACAATCTAGATGATTGAAGATGTACAACGAATGAATGAAGAAAAATA ACAAATTTCAAAGATACCAATCGGCTTACGTTGAAGCGAGAAATCTCAAC ACGATTGAGAGTTAATTAAGGGAAGGTTCGTATTATTAAATTTTAGAAGT AATATCTATAAATGGTTGGGTGAGCAATATATAAGCTCATAAAACAGATA AATGGAAATTATTAACCGCGAAAAGTAAGTTCATTTGAAAACAAACCTGG TCGTGGCCTTTCGCAGTAGTGGCGAAGGTTGATCTTTCTTGGCTCCTTGA CGCCGTGGAGCCGGCTTTGGTGGAGCAGGTAGGTTCAAGTTTCCTTCTGA CATTTTCACCTTTTAAATCCTTGTGTTAAAATTTTAGATTATAAAGAAAC AATAAATTTTCAAGCACCAAAAAACTTGAAATTCTTTCTTTAAAGGATTC CTTTAAAATTTCTCTTAGAATTGTTCATCTTTTACTTTTCTGTATTTGTG TTTTTCAAAATATGCTCTTCCTATCTTCTCATGATTTTGTCGCGTAAAAT ATGAGGAAGTTATCTTTCAAATCAAACATGTGACCTTTATCTTGCATTGG CAGTTCTCGTGAATCGCCAGAACGATTTTTGATTGAAATCAAAGAGAATA CAACACGAAAAAATCTGCTATATTTCATATGAAAACTTTACAGAGTTCAT TCAATCAAAATTTCATTGTATTAGTTCTAAGACCTTTCATCGGTGAATAT TATATACCATTTATCGAACAGGTGTTTTTCTGATACTCGTAATAGGAATG GGTACTAAATTGCTAAGAAGTCTATTTTGATACACAGTTTTTTATAAGAA AATGAGCCAAAACCTGAAAAGTATCAAAACAATTCGAGCCTCAAATATCA GCACAGACCAACATATTTTCATTCTAAGCCTTTTTTAAGTTCATAAAGTG AATTAAAGAGCATAGAAATACCATTTTAAGATTTCAAGCTAAATATCGTA AAATAGGAACATAGCCAAGACTCCGGACAAAGTTCACTAGTTCTTATAAA ATAAGCTTGTATTCTGCTCATTTGAATTGTGATTTATATTTAGCAAATTC TGCATGTTATTCAATTTTTTTGCAGCACCTGTTATTATACAAAAAAACAG GAATCCTTTTTTTGATTTTTTGAAAAATCAAGATTTTGAATGCAGCTGCT TTTTTAGCAGTTTTCTAAAGATCAGCAGTTTAATATTTCGTAAAAAAGTT TTTTTCATTCCAAAGTTTTGAGTCATTTTATTCGTATGTTATTTTATGAT TTATAATCACAGGGGCCGCGGCAGGGGGGAGCCACCCGGGCCTTTGGGCC CGACCACATTTTTCAAAGCAAAAAGAAAATATACTGATTCAGCTTAATTC TACTTTACACACTTTTTTTATAAGAATGTATACTTTATTAGAATATTTAT GATGAAATTGGCCAAAAAAATAAGAATATGGTAAGAATACCACCATCGTG AAATTTGGCAACTGAGTCTAAGAATGCTATTTTTACCCATACATTTTAGC CAGCAATGCTAAAAGAATTCAACAAAAATGTCAAAAGTTTGCTGGGATTG GATCCAAACATCCAAACCTAAGAATACCGTAAGAATATTTCGTGATGGTT CTGGGGATGCGTGCAGCCTAGTTGGTAACAGATCACCAATTTGATCAGAA AATCATTAGGATTTCATTGGATAATCGGGATGGTCTGCTTTTCTGATTCC TTCTATTATATGCTCTCGATAAAAGCCTTGATGTATCAAAGTCAAATTCG ATTCTCACTCGGTTCTAACGTCAAACTTATTTTCATTAACAATATNGAAT TCGATTTTCACTCAGTTCTAACGTCAAACTTAAAACAGTAGGCCGAAAAA GATCTCAAGAAATGAACAAGATATCTGATCATATATCACTTGTTGAAGCT TATAGATACTTTCTTGCTTCGAATGATTCATCAAAACTAATTCTTAGTGA TCAACTTTATGAAACTATGCTAACCACAAACGTCTATAATCAAGCCACAA AATTGGTCAAGCCCTGATCTTAAATATATATGTAACAGATAAGTTTTTGG TTCATTTGCTTTTTTGGAAAGGTTGGAAAGATAAAATTGATTTTATTAAA ATTCCTGAAGTGAAAATGAGACATTAGACTGTTTATTTGGAACGACACTA AGACACACAACATTTAATATCATTTAATTTAGTTTGTTTTTTTTCTTAAA GAAATGTTGAGATTCAATATCGTCAGTCTACTGCTGGTATTCGTAGTTGT TATACACCATGTAAACGCCCTGTTAGGAGGGCGTGGTCGCGGGAGATTAT TTGGTATCCATGGTTACATCAATGATGATACTCAGCTACCATCTTGGCTC GCAGAGCATCACCGAAGAATGGCTCAAAGAGAAATGGAACTGGAACAAGA GAAAATTGAAGAATCGATCGGTGTTCTTTTAGAACAAGGCGAATTTTACG AGAGCCGAGGACATGGAAAATTATTCGGAGTGGAAGAAGGCGAAGATAAT TCGTTGATTGTGAGTATAGCAGGTGCGGATCAAGATGAAAATTTAGACAA AAAAAGCTCCATAGTGGGTAAAGATACGTCTAAGAGTACTGATGTGGAGA ATAAACCATTAATATCAGGAACTGAAAATTCTACGAGATTAGAGATAGGG ACTCTGGAAATTGGAAAATTGGCAGATACTGGTAATTCAGGTGACAATTA TAAGAACTTGACTGGTACTGATGACAAGGGAATGACANAGTAATTCAGAT GACAATTATAAGAACTTGACTGGTACTGATGACAAGGGAATGACATCCAC ATTTGGTGAAAAGCTTACGACTGAAAGTGGGGCGTTGCCAGATGGAGTTA AGGAACACGGTAACGATAAACATTTAGAAAACAATCAAGATGATCAAAGG AAGTTCCCAAAGGAAACAAATTCGATTATTTCTGATAGAGGTATGAAATC TTTGATTAACGAGAAAATTAACCCAATTACCGATGAAAAAAAGTCAAAGA ACAGTTATGATAAATTAGATAATGGTCCTATGAAGTCATCGTCACCAACG CATAAGAAAAATGTTAAGAAATACAAAGCAAATGTGAGTACTAGTCCTCA GCCTCCTAAAGAAAAGAAACCGATTGATCGAAATAGTTCAAAATTGACCA ATGACGTTGGTGGACTTCAGGGGACGAAAAAAGTGGAGAAATCGAAACCA AGAATGGTCAAATTACGTGGACGAGGAAAATTATTTGGCATACTTGGTAT TCGAATAAAGGAAGTTGAATGGTCGAAATATAAATTTCGTCGTGGTAGAA GATTACCATGATTTTAAGGTTTAAAATTAAGAATATATTTACTTTCTCAA ACTTGTACATCTTTCCTTAATAAAAACAAGAGTGACGTTATCAAAAATAG AAAATTTTGGGGCATGCTCCCTTGAAATTTGTTTTAATGATTCAATCCAA GGAATAACTCCACCAAATAGCACACCGCTATGCAAACGTCATAATTATTA CTTTTAACATTTTACCGAAATTCAATCCCACAATACTTTTCATCATGATT CGTAATGCGTGCAAGTTATTACTTTTGTATTGTCAATAAGTGTAATTGAC TTGCAAAAGCATAATTAGTGCAAAGGATGATGGGATTAAAACTCGGACAA ACAGTAATTTTGATGTCTATTTTTAGAATCACTGTGGTATGCTATTTCAG ACCTATACCTCTTTAAAGTGTCTTTCTCATAAGGGGTCTTACCCAGGCCG TTACTTTAAGCGAGCATCATCAATTCAATCAAATACCCCCCCCCCCTTTT CAATTCAGCTAGTTATGCCTACTTTGAAAAATATATTGGGTAAGGCAGGT GTAAAAAACTTAGTCAAATTTTGTTTGTAGGGAGATAGATTTATTTTTAT AATAAAAAATATATGATTTTGTCAAAGCCCTTGTAAAAAAATATTTATAC AGCGTAAAATAAAAATCACCTTGCAAATAAAAAAAATAAAAGTGAAATAA AATTTAGAAAATATGTTTCAAATTTGGTATCGAAAATTGTCCCCGTAATT CAATCTTTTCTTTGTTAATAAATGTCTGTCTTTGGACTCCAGGCCCTAGT TTTAACAACTGAGACCTCCGACCACCCATCTGTGGTTGGCTTGTCGGCGG CGGTGACGTACGATACTAGAGTCAATACCGGCTGCTCTATGTTTGTCATG TATATCAGTTTTTAATCGGTCTTCCGTGAGTTTTAGCATGCCAATATTTC GTTCAACAGCCTGTAGAGACGCATCTAGCCCGTGATTTCCTTCGATAATA TGCTGTGCTTCTTTAAGATGAGTTCCTGGGTGTCGTTGGTAGCACTTCAC TTGAGGGCGGTCAAGGCGTTCTCGTGTCGTCAAGTCACTGGCTGAGACAG GTCCCTTTTTAAAGAAATAATGTTCAATCAAAATTAACGTTAAGTATTTA ATATGGAGCTCTCATCCTTTAGTTGATTTTGAAGTTTGAAGGGATCAGTT TGTTTGAGAATTTTGATCCCTACTCTCGGGACCCTAATAAGCGTCCCACC CCGCTAATTAATTTTTTCGAAAATTTTCTACCCAGGACATTCTTATTCCA ATTCCCCCGTATTTGAAAGTTCCCTCTTTTGCCCTAGATTCTGCTGTATT TAGCCTCCTTTTTAAAAATTTCCCACCCAGAATATTTTTATTCCAACCGG TGGGG

Coding sequence (CDS) from alignment at sc0001278:45907..62811-

>TCONS_00035249 ID=TCONS_00035249|Name=TCONS_00035249|organism=Clytia hemisphaerica|type=CDS|length=540bp|location=Sequence derived from alignment at sc0001278:45907..62811- (Clytia hemisphaerica)
ATGTTGAGATTCAATATCGTCAGTCTACTGCTGGTATTCGTAGTTGTTAT
ACACCATGTAAACGCCCTGTTAGGAGGGCGTGGTCGCGGGAGATTATTTG
GTATCCATGGTTACATCAATGATGATACTCAGCTACCATCTTGGCTCGCA
GAGCATCACCGAAGAATGGCTCAAAGAGAAATGGAACTGGAACAAGAGAA
AATTGAAGAATCGATCGGTGTTCTTTTAGAACAAGGCGAATTTTACGAGA
GCCGAGGACATGGAAAATTATTCGGAGTGGAAGAAGGCGAAGATAATTCG
TTGATTGTGAGTATAGCAGGTGCGGATCAAGATGAAAATTTAGACAAAAA
AAGCTCCATAGTGGGTAAAGATACGTCTAAGAGTACTGATGTGGAGAATA
AACCATTAATATCAGGAACTGAAAATTCTACGAGATTAGAGATAGGGACT
CTGGAAATTGGAAAATTGGCAGATACTGGTAATTCAGGTGACAATTATAA
GAACTTGACTGGTACTGATGACAAGGGAATGACANAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020569XLOC_020569Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035249-exon-sc0001278-1575043694:62684..62811TCONS_00035249-exon-sc0001278-1575043694:62684..62811Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1575043694:60137..60311TCONS_00035249-exon-sc0001278-1575043694:60137..60311Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1575043694:45907..48410TCONS_00035249-exon-sc0001278-1575043694:45907..48410Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1510915933:62684..62811TCONS_00035249-exon-sc0001278-1510915933:62684..62811Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1510915933:60137..60311TCONS_00035249-exon-sc0001278-1510915933:60137..60311Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1510915933:45907..48410TCONS_00035249-exon-sc0001278-1510915933:45907..48410Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1491911889:62684..62811TCONS_00035249-exon-sc0001278-1491911889:62684..62811Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1491911889:60137..60311TCONS_00035249-exon-sc0001278-1491911889:60137..60311Clytia hemisphaericaexon
TCONS_00035249-exon-sc0001278-1491911889:45907..48410TCONS_00035249-exon-sc0001278-1491911889:45907..48410Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035249-proteinTCONS_00035249-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001278supercontigsc0001278:45907..62811 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.225933 0.491373 0.282615 0.50874 0.311706 0.135354 0.235346 0.200604 0.175641 0.330966 0.127568 0.208608 0.0492876 0.21142 0.0690281 0.0600042 0 0.0442072 0.0249579 0.111484 0.198897 0.276044 0.692484 1.3069 0.864001 0.475925 0 0.069035 0.268635 0.242115
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035249 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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