TCONS_00035246 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035246
Unique NameTCONS_00035246
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1316

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035246 ID=TCONS_00035246|Name=TCONS_00035246|organism=Clytia hemisphaerica|type=transcript|length=1316bp
TTCAGCACATAAATAAAGATAATTGaatacaaaatttaaaaaaacaaaaa
aacaacgaaaacaTAATGAGGGGAATAAGTATATCAGAACTTGGTACAAT
TGATGTCATGAAACTTGTCACCAATCTTCCAAAACCAACACCTACTGGGA
AACAGGTGCTGATCAACGTTAAATACGCCGGTGTGAATCCCGTAGATACG
TACATCCGTAGCGGGGCATTCGGAAAAGCTACTCCGGAATTCCCTTTTAC
ACCGGGCTATGATGGATCCGGTATCGTGCACCAGATCGGTGATCAAGTTA
CCCAAATTAAGGAAGGTGACCGAGTGTGGTTTGTGAAATGTCTGACAGGA
TCAAGTGCAGAATATTGTCTTTGTAACGAAGAAGCCGTGGGTGGACTACC
TGAGCCAAGTTCCTTTGAAGTGGGTGCTATGATTGGAACGCCCTATATGA
CTGCATATAGAGCCATCTTTCAAAAAGCACATGTCAAAAAAGGAGAAACC
GTTTTGATCCATGGAGCGACCGGAGGAGTTGGTAATGCATGTGTTCAAAT
GTGTAAGAACATTGGATGTCGAGTCATCGGAACAGCTGGATCAACTGAAG
GGGCTGATATGTTGGTCAAACTCGGTGCAGATGCCGTTTTTAACCACCGA
ACAGACGGCTACATTGATAAGATTGCAAAAAGTGGAGAGAAAATTAACGT
CATTATTGAGATGCTTGCAAATGTGAATCTCCAGTCGGATTTAGAATTGA
TTGAACCTAATGGACGGATTGCAATCGTTGGCAACCGTGGGAATGTTGAA
ATCAACCCGAGGCtgatgatgaaaaatgaaatcacCGTCACGGGGGTCAT
GGCTGGCGCAATTTCACTGGAAGAAAGCCTACAGTGTAAAGAGTATATAA
AGCAAGGTCTACAGGCTGGATGGATTAAACCTGTTCTATGGAAAGCATTT
GAGCTGCAACAAATTGGTCAAGCTCACGAAGAAATTATCACCAATAAAGG
AGCTAAAGGTCAAATGGTTTTAAAGATTTGATTTTACAACATGCGCAAAA
GGTTTGAAGTCatttacaaaaactttttaggctttcattggAGTCTTCTT
GATTTTTAAATGACGTATTTTTAGTCTTAAGCCCTTCTCTTTCGagcttt
tttaaaaatgattttttgtacatagaTTTTTTACTTGATTATCTTGAGAA
ATGCATTGCCATAATACGTCATTATACGCAGCAATTTTACGAAATTACAC
gagaaattcgcaaaattttttcagcgaaaattacacttttttgccatttt
atactttcagtttttg
Run BLAST on NCBI

transcript from alignment at sc0001278:8956..20870-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035246 ID=TCONS_00035246|Name=TCONS_00035246|organism=Clytia hemisphaerica|type=transcript|length=11915bp|location=Sequence derived from alignment at sc0001278:8956..20870- (Clytia hemisphaerica)
TTCAGCACATAAATAAAGATAATTGAATACAAAATTTAAAAAAACAAAAA
AACAACGAAAACATAATGAGGGGAATAAGTATATCAGAACTTGGTACAAT
TGATGTCATGAAACTTGTCACCAATCTTCCAAAACCAACACCTACTGGGA
AACAGGTAGATATAAGATCTTTACATAAGATGTTTACTTTTTTTTCACCT
CCATAACACCGGCAGACTGAAGTGTATTAGGTTTTACTATTTTCAAGTCA
CAAGGCTTCAAACGTTAATAAGCACTACACAATACCTTATTTTCAAAGGA
GTGTAGACCTTAGTCCAAGCCCCTAGTGCTAAAGGGGTCTAAGTCTAGGT
CTCGCTCAAATCTAAAGAGGCCCAAGTCAATGACAAATTCAAAGGGCCTA
AGTCCATCTGTATCTTCAAATTTTAAAGTGTCTTTGTCCATCTTATTGAG
ATTGTCTTTTCTGGGGAACCCGAAATTCTCGCCCGAGCTTTTAATTCTGA
AAAACGTTAAAATATCCAAAATTGTCAAAATTTTGGCGGTGATTGTAGTG
GTTATTAGCTTCATTTATGTCATGTGGCTAAGTTTTGTGGTTGTAAGACA
ACAGCTTAGGTTGATGTTGCCATCAGAGTACTTAAAACACTACTGTTGAG
CCTTGCATAACCGCGTGTGGAAGCTTGCTTCTCAAGACAGGTGCCGCGGC
ACCGGGGGGGGAGGGACAGTCGGGCCTTGGTCCGACCACATTTTTTCCAA
GTAAAAGAAAATTTACTAATCAAGTCAAATTTGTTTAATAGCGTTGAAGC
AAACTGTTTTAGGCGACCTAGAAGGGCTAAATTCAAAAATTTTCGCCCGT
CGGCCCCAACCATGATGGTGCATATCATAACCCTATCACTTTCAAAGTGG
AGCCGCGGCCCCTGCAAGAAAGTCTTTGGAAGACTTCTGTCTACCGAGCA
TTATATCTATCCGCATTCAATGGTATTCAATGTCAATTCAATTTTAAGGA
AAACTAAAAAAAAACATTTTCTCGTCAGGTGCTGATCAACGTTAAATACG
CCGGTGTGAATCCCGTAGATACGTACATCCGTAGCGGGGCATTCGGAAAA
GCTACTCCGGAATTCCCTTTTACACCGGGCTATGATGGATCCGGTATCGT
GCACCAGATCGGTGATCAAGTTACCCAAATTAAGGTAAGAAATTTTATCC
AAAAATCTGCATTTTTTTAAGCATTACCTGTAAAGTTTTAGCACTGAAAA
ATGATTTAATATATAATTCCCCTGGTTTGTGAACCTAGAGACCTGAAAAT
GGTTTAATTGGGGACGAGATGGATTAATTTGGTTGATCGTTAACCAGTAA
TAAAACACTTGTGTTACTTTTTATAAAGAACGCGTCATTTTTATTACTTC
AAATGACCATTATTAAAGTATCTTATAAAAACTCCATCTCATCTGTTTAA
TTAGGGTTAAATTTTGCACACAACACTTGGTTACATTTCAGCTTCAAAAC
GAGGCTGAAGATTTAACTGAGATTTCACATTTATTTTTTTTCTATCCCTC
GTCTAAAGGCTTGGGGACACGAGAAGTTGTTTTGCGTTGGTGCAATGCAA
CTTGCTCCATCCCACCAACCTGAAACGACGAGAAAGCGTCTCCACCCCAT
TTTTCTCTGTACCAATAAAAGTGAATTCTCACTTTTGTCCCTGGGAGAAT
GAAGCGAAATTATTTCGAATCAGTATTGCTCCATTGTCCCAGGCACAAAA
TTAGCGTGTCTTTTGGGTATTTCCCTCACTTTTTGTCCCATGAAACAAAA
AAGAAACCATGAGACACGCACTTTTCTGTGTTGGTGGGATAGAGCATGTC
GCATTGCATCAACGCGAAAAAAACTTCTGTCCCCAAGCCTTAACCTCAGC
TATGAATTTTACCTCAGTAACATAGTTTTTTACTTATAATGGTCTACACT
CGAAAATGGGGGGCGTACGGTTTCACGGTATCTGGGATAAGGCTTTTTTA
AACACGGGATAACGGTATTTGTGAAAAAAAACTACGGGATGACGGGATTT
CAGATGACCCACGGTGACGGTATTTGTCAGATTTCAATCTCGGGATACGG
TATTTTGATTAAAAATCTATGGTATTTCGGTGAAAATCATAGAAGAACGG
TACAGCCGGTACGAAATTCTCACCACAACCAGAGAGTTAAAGTGTAAACA
GGGCTTTAAATATTCGAATACTTGTTTGACAATGTTCTTTATATTGTGGA
CTACAAACGTCTTGTATAAAGATAGCATCAACAATAGTCCACACAGCAAC
GTTTTTGGAGGCAATTGGCAAATTGTTGAGAGCATTCTCTTTTCATGAGA
AGAAATGTATAACGTGTTTGTTTGTGCCATCTTAAACCTCCTCTTTTAAA
TCTTCAGTGTGAACTACCCTATTAGAAAGGGGGAGGGGTAAAGCTTTCCC
AAAAATGTAACCCAGCTGGCACATAACGTTGTTTCAACCCGGGGAGGGGG
GCACTCCAGGTAAGTGACCTATACCGGACGTGCGGCCCTTAAGAGTAGGT
TTTTTGGACTTTGGAATTAAGTGCACTGCAAGAGTTGATTTGTGAGCAAG
TGGGAAAAAGTGCACTCTAAGGGTGTAAAATTTGAGAAAATATCAAATTT
TGAGGTAAAATTTGAGAAATTTTCCGGCACTGTAAGGGTCCGATTTTATA
GACCTGATTTTTGGCCGAATGTACGATCGTTTTCAAAATCGAGTGCCCCC
CCGGGTGTTTCAACGTCCATCTAACGTTCATAACGTTCATATATAACGTT
AGACAAACGTAGAAACAACGTTGTGTGCCAGCTGGGAAGGTATAAATAAT
AAGGCAAGGTAGATCGGCGTAACGGATTGACCCATTGAAGGGGGAGCAAC
CCTTCTGTTACTATGATTTACCTTTCTTGGTTTTACGAAAATTCTTCACG
GGATCGGTATTTTCGGAAAAAAACCACGGGATGACGGGATTTCCGCGAAA
AATTTACGGGATGACGGGATTCCAGATTGCCGTACGCCCCCCACTCGAAA
ATATTTGAAAATAATTCTTGCAGGAAGGTGACCGAGTGTGGTTTGTGAAA
TGTCTGACAGGATCAAGTGCAGAATATTGTCTTTGTAACGAAGAAGCCGT
GGGTGGACTACCTGAGCCAAGTTCCTTTGAAGTGGGTGCTATGATTGGAA
CGCCCTATATGACTGCATATAGAGCCATCTTTCAAAAGTACGACATTATT
CGTTGTGAGTGTGGGTTATTGAGGGAAACTGGCCTATCTTGTATACATTA
CATCTGGTATTGAAACCAGTAGGATATTTGAGGATGGTTTTCATTAAAGA
TTTTCTTTTCATGATATAAAAAAGTGGCGCCCCTCTTTGCTGACAAAGCC
GAAAAAGCAATAGAATTTCTAAACATATGCGCTCGCATGGCGCGGGAGGG
AGAAAAAGTTGTTCTTTCTTTTATTTAAAAATGCTGTTCAAGCAAATGGT
AGGAGATACCTTAAATGATGTCCTTTAAGACCTCTGTTATGAATAAAATG
ACAGATTCATCTTACTGGGAGAAGCTACTAGTGTGTACTCAAGATATCTA
TTATTCGTCATAACCCTCACCTCAACAAAATATTTTTTACTTATCGATCT
TCTTATAGTTTTAACATTGACTTTAGGTTGGGGACAGGGTTTGGTTTGGT
GGTTGTTTGACAGGGTCCAGCGCGGAATTTTGTCTTTGCAATGAATCTAT
TGTTGAACAATTACCTGACTCAATATCTTTTGAAATTGGTGCTATGATAG
GTGGCCCGTATAGAACCGCCTACCGCGCTATCTTTCAAAAGTAAGTGCAC
TCTCCTCGGCTAAGATTTACATTGAAGAACGTATTTTGATAAGGTTTTAG
TGTATTTTACCCCTATAGGTCAAAAATCTTAAAAATCACAAAATTGCTTT
AACCTCTGCTTAAGTTTATCTTCTTCATATGTAATCACTTTCGACTCCCG
TTCATTCTTTTTAGAGCACATGTCAAAAAAGGAGAAACCGTTTTGATCCA
TGGAGCGACCGGAGGAGTAAGAAAATATAACTCGATCCAAGCTTTTATAC
CCTAAGTAACTAATCCTGAAGTACAGTACTGTTTTCAACCCTTCTTCCAA
GTTTATTCCAACCTAACTCATTATTTGTCTATAATGCAACTGTTCGTTAG
TACTCCTGCATATATTATATTTGTCCTATTAGCTGCATATCGTAGGATGA
CTAAAGCTTCTCTTTTCCGGCTAAAGTTTCTTGACGCCACTGTACCGTGA
AAGAAACCGAGACTTCAGTAAAAAATAATCTCAACTCGTTAGGCGGTCAT
TCACGGACCGTAACTGTCCACGCCTTTATAAGCAACACAAAAGTTCTTTT
TGCCAGTATGCCTGGGAAAAGCAGCAGTAAGATCCTGGAAATGCGCCAAG
AATGATAAGCCGGGGTTGAGAAAGTTTAACAATCCTACGGTACCAATTTG
TTGCCCAAGTTCATCTGATTTGAAAGTTTTTTATTTTATTTCCAAGGTTG
GTAATGCATGTGTTCAAATGTGTAAGAACATTGGATGTCGAGTCATCGGA
ACAGCTGGATCAACTGAAGGGGCTGATATGTTGGTCAAACTCGGTGCAGA
TGCCGTTTTTAACCACCGAACAGACGGCTACATTGATAAGATTGCAAAAA
GTGGAGAGAAAATTAACGTCATTATTGAGATGCTTGCAAATGTGAATCTC
CAGTCGGATTTAGAATTGATTGAACCTAATGGACGGATTGCAGTAAGTTG
TACCCCCTTCTCACCGACCCGGTAGGACTTTTTTAGCCAACGGGGGTTAA
AATAACGGACTGAAACTCGATGAGGATTGATATTCCCATATTTTTATGGC
TTGGGATTTAAATTCCATTGTTTTCAAGTCAGCAAATTTAGTGGGGATGG
GAAAAATAGCATAATCCAGTGAGGATTAGTTTATTTGATTATTTTCAGTG
GAGTTACCGTCGAACATTTATACTATTTTGTGGGTTAGGCCTAATTGGAG
TTGAGTCCCGAGTGGCATTCGACTTTTCAGACAAAGGATTTTCGTCGATT
TTGTACTTAACCATAAATTTATGTCTTTACCTTTTTGGGTTTTCTTTGGA
ATCGATTCTCTTCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCGGGACAGTCCCGAATTCAACCTTTTTGTTATC
AAAATCGGGACCGTCCCGAATACCGCCTTCTTTATAAACACTCGAAAACG
TATTTTTTTTAAAGAAGTCGGAATACTATGTAAGGGCAGTAAGTCCATAG
TATTATATTCCGCCTTCTTTAGAAACACTCGAAAACGTATATTTTTAAAG
AAGGCGGAATACTATGTTAGTGCAGTAATTCCAAAGTAGTGTATTCCGCC
TTCTTTAGAAACTCTCGAAAACGTATATTTTTAAAGGAGGCGGAATACTA
TGTTAGTGCAGTAATTCCAAAGTAGTGTATTCCGCCTTCTTTAGAAACAC
TCGAAAACGTATATTTTTAAAGAAGGCGGAATACTATGTTAGGGCAGTAA
GTCTATAGTAGTATATTCCGCCTTCTTTAGAAACCCTCGAAAACGTATAT
TTTTAAAGAAGGCGGAATACTATGTTAGGGCAGTAAGTCTATAGTAGTAT
ATTCCGCCTTCTTTAGAAACACTCGAAAACGTATATTTCTAAAGAAGGCG
GAATACTATATTAGGGCAGTAAATCTATAGTAGTATATTCCGCCTTCTTT
AGAAACACTCGAAAACGTATATTTCTAAAGAAGGCGGAATACTATGTTAG
TGCAGTAATTCCAAAGTAGTGTATTCCGCCTTCTTTAGAAACATTCGAAA
GGGAATTTTTTTAAAGAAGGTGGAATACTATGTTAGGGCAGTAAGTACAA
AGTAGTGTATTCCGCCTTCTTTAGAAACACTCGAAAACGTATTTTTTTAA
AGAAGGCGGAATACTATGTTAGGGCAGTAAGTCCATAGTAATGTATTACG
CCTTCTTTAGAAACATTCGAAAGGGAATTTTTTTATAAAAGGCGGAATAC
ATTGTTTGGATTTTTTGTTCTAATATTTTCGCCTTCTTTAGAAATATTGA
AATAAGGAAAAATCGGGCTAAAAAATTTCTCGTTGCCTTATATACTTTTA
CTTGAGTCCCGAATCCAATATGTTCATAAGGTAAATCGGGACTAAAAGTT
TCTCGTTACTATATATACTTTTACTTGAGTCCCGAATTCAATATGTTCGT
AAGGTAAATCGAGACTAAAAGTTTCTCGTTACTATATATACTTTTACTTG
AGTCCCGAATTCAATATGTTCGTAAGGTAAATCGAGACTAAAAGTTTCTC
GTTACTATATATACTTTTACTTGAGTCCCGAATTCAATATGTTCGTAAGG
TAAATCGAGACTAAAAGTTTCTCGTTACTATATATACTTTTACTTGAGTC
CCGAATTCAATATGTTCGTAAGGTAAATCGAGACTAAAAGTTTCTCGTTA
CTATATATACTTTTACTTGAGTCCCGAATTCAATATGTTCGTAAGGTAAA
TCGAGACTAAAAGTTTCTCGTTACTATATATACTTTTACTTGAGTCCCGA
ATTCAATATGTTCGTAAGGTAAATCGAGACTAAAAGTTTCTCGTTACTAT
ATATACTTTTACTTGAGTCCCGAATTCAATATGTTCGTAAGGTAAATCGA
GACTAAAAGTTTCTCGTTACTATATATACTTTTACTTGAGTCCCGAATTC
AATATGTTCGTAAGGTAAATCGAGACTAAAAGTTTCTCGTTACTATATAT
ACTTTTACTTGAGTCCCGAATTCAATATGTTCGTAAGGTAAATCGAGACT
AAAAGTTTCTCGTTACTATATATACTTTTACTTGAGTCCCGAATTCAATA
TGTTCGTAAGGTAAATCGAGACTAAAAGTTTCTCGTTACTATATATACTT
TTACTTGAGTCCCGAATTCAATATGTTCGTAAGGTAAATCGAGACTAAAA
GTTTCTCGTTACTATATATACTTTTACTTGAGTCCCGAATTCAATATGTT
CGTAAGGTAAATCGAGACTAAAAGTTTCTCGTTACTATATATACTTTTAC
TTGAGTCCCGAATTCAATATGTTCGTAAGGTAAATCGAGACTAAAAGTTT
CTCGTTACTATATATACTTTTACTTGAGTCCCGAATTCAATATGTTCGTA
AGGTAAATCGAGACTAAAAGTTTCTCGTTACTATATATACTTTTACTTGA
GTCCCGAATTCAATATGTTCGTAAGGTAAATCGAGACTAAAAGTTTCTCG
TTACTATATATACTTTTACTTGAGTCCCGAATTCAATATGTTCGTAAGGT
AAATCGAGACTAAAAGTTTCTCGTTACTATATATACTTTTACTTGAGTCC
CGAATTCAACCTTTTCGTAGACCAATTCGGGACCGTCCCGAATCAAACCT
TTATATAGACAGATTCGGGACCGTCCCGAAATTTACATTTTCAAGACAAG
CTATAATTAGTCCGTATAAATAAAGATTTGCCCCACACTTCCCTGATTTT
CAAATTCAAGCCGCCATATCCATCTTTTCAGTGACTCAGATAATAAATAT
GTATTATATATACTTTTACTTGAGTCCCGAATCCAATATGTTCATAAGGT
AAATCGGGACTAAAAGTTTCTCGTTACTATATATACTTTTACTTGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGCAAAATCGGGACTCAA
GTAAAAGTATATATAGTAACGAGAAACTTTTAGTCCTCGTTTACTATATA
ATAGTATAAATCAAACCATCGATCAATTTTTTTTTCATCGATTTCGACTT
CCTAACTACGTCGTTCTAGACAGTCCCGAGCGGGACTCAAGTTAAATTAG
GCCGTGGGTTACCCGGCATTCATAAGCCTAAATCATACCCAATCTACATC
CAAGCCTGGTGTGCGTTTTTTTTCTAATCTGGAATTTGAGGAGACATGTT
GGCCTTTCACCAATTTAAAATAATTTTGTTTTGTGAGGTTAATTGTTGAC
GTCACGATAATATAAGATTCAATAAAACTGACGTCAAATATTGTTTCACT
ATTCATTTGGGTTCCAAAATTTGTCAAGTGCAGTCAGAAGAAGTATTTTT
CGTGGATTTTTATCGCTGATTATTGAAATTTGAAGACACGATGAGGGAAT
TCGCTGATTGTCGTATCAGTAGAGAAGATGAATATCGCCTTATGTATGAG
CATGAAGTTGAGCAAAACAAAAAATTTAAATTGGTCAACAAAGACCAACA
AAACGTTATCGAAGCTTTACAACAACGTCTCATCGAGATAGAAAGAAAGT
TAGCTGGTGGACAAACACACTGTGCCACGATGGATGAAAAAGTCAAGATA
GAAACACAAAAATCAGAGCAACTTGAGAAGAAATGCAACAAAAAGGAGGT
GGAGATTATTCGAGTCAGTCAAGAATGTAAATATCAAGAGCAACAAGCTG
AAAAATTGAGCAAACTCAGTATTGCGTTGTTACAGAAGTTGGAGAGTGTA
ACGGACAATCAACTCATCCTTAGTGATAAGATAGACACTTTAGAGCAACG
AGTTGAGCGTCAAAAGACCGTCATTAAGGAAAAGGAATCGGCTAACAAGA
GATTGTCCAATCAGATCATAGATCTGGTCAAGATTTGCAAAACGGCAGAG
GAAAAGTCGGATCTTGACGACAAGACTATTCAGGATTTGAAAATAACCAT
ATCCCAACAAGATTCGAGCATTGAATTGTATGAGGCTTTTGAACGTCGTT
TCAAAACACGTGAAAATGAAATCCTCCTCAAACTAGAACAATTAGAAATC
TACACGAATGCTAAATCAAGGAACCGATGCTTTGCCGGGTTCCGTCGTCG
ACCAACTCAAGTGCAATGTCTTGTGCAAAGTGTTTGTACTCTATTTCTGG
GTAATCTTAGCTCTGGTGTTCAACAACGATCATCTGATTTCAACGAGCGT
CTTATTTGACTTTGCAAGACATTTCACAGTTAGTGCCATTATGTGCCCTC
TGCGATGGTACATTACCAGTCGTATAAGAAAATATCGATATTCCCTCATC
TATGAGAAATAATATATTTTCATAAAAATAAATTTGTCTTTCATTTCATT
GGTTTCTCCATAACGCAAAAGTTTTAAAAAGAAAATATACGATACGTACA
CGTTTTTTTATAAGAACAAACTATATAAGAACATAAGGCTTCGAGGCCAA
AAAATTTAAGAACATTCTAAGAACATACTAAGGCTTTAGAGACTTAAAAA
CATGCAATTTCTTAAGAAATTACATAAAAATGCTCAAAAGATGCTGAAAA
TAAGAACATTTTAAGAACATTTTTAGGCTTCAAATCCAAAAAACTAAGAA
CATTCGAAGGCTTCGAAAATTTTTGACGTTCTTATAAAAAAAACCTGTAC
GCGAGAACAGCTCAGCAGCATTAAGTAAAAACACACTGCTCATATCACCC
TGTCCACAGGCAATTTTTTAACTTTTGAAAAATTTTCTTGTTTGTCGTTC
AGCGAAGAAGAGTTCGGTATAGGGCCAGTCGTAAATGTTGTCAAAGAGGT
TGTTTTTAAAGCCACACTGTGAAACAAAACGTTTAAAATATTTAAATCTT
AGTGTTTTAGTCGGGTAATATTCTATGTGAAAAGTGAGTGTAGGAATTAG
GTAAGCGTATGGAGGGAAAATTTATCGACCTGAGGGGCACTCTCTCGATT
TCCTGCTTTCCCTATTCTTTCTCCCTATTTTCGCCCTTGATTGCCGTGAT
TGAAATAGGAAACCATCAGCCTTTTCGATCGGTACAATCATGGATTTCTC
TTGGAGCCTTGCGCTCTCCCCTCCCATGCTTGACAATTTTAACCTTTATT
TATTTTAAATATTAAGATATTATAATTTAATGGATAATTTCATCATGATC
TTTTTAAACGAGGATTATATATAAAGAAATTTTGACAAAAGCTTTCCTAT
GTCTTTTTTAATCTATGTAAAAGATTTCTCTTTAAAAATATTTCCAAACT
TCAAACTATTCGGTCGCCATTTTGCAATCAGGATAAGGCCAGTTTTAAAA
GTGAGGCGATCTCAATTGTCGGACTTAGAATTTCAGTATTTGGAAATCAT
GGGGAAATAATGTCTTGGATTTCAAAGTTTTGCGGAATTCACCCCCCCCC
CTAGTGGACAAAAACTATATAAATTTGACTTCTGGAGTGAATTACTATTA
CAGAAATGTTAAAACAAATTTGAGAATTATAAACGCTTTATATCCCATTC
AGAAATAGGTGAATGATGAACAAACTCAACAGACATAAAACGTCAGAACA
ACCTCTATACCATCGTGTGGTGATGAAAATCAAAATTTCAAAATCTAAAA
TAAAAAACTTTAAAATTTCGAAGTAAGCTCGAGAAAAGAAAATGTTCTTC
AAACTTCTTAAAAGTCAATGAATATGAAATTTCGCAAAAAATTCTTTTAA
GGACTTCATGTCTTTCCTTTAGATCGTTGGCAACCGTGGGAATGTTGAAA
TCAACCCGAGGCTGATGATGAAAAATGAAATCACCGTCACGGGGGTCATG
GCTGGCGCAATTTCACTGGAAGAAAGCCTACAGTGTAAAGAGTATATAAA
GCAAGGTCTACAGGCTGGATGGATTAAACCTGTTCTATGGAAAGCATTTG
AGCTGCAACAAATTGGTCAAGCTCACGAAGAAATTATCACCAATAAAGGA
GCTAAAGGTCAAATGGTTTTAAAGATTTGATTTTACAACATGCGCAAAAG
GTTTGAAGTCATTTACAAAAACTTTTTAGGCTTTCATTGGAGTCTTCTTG
ATTTTTAAATGACGTATTTTTAGTCTTAAGCCCTTCTCTTTCGAGCTTTT
TTAAAAATGATTTTTTGTACATAGATTTTTTACTTGATTATCTTGAGAAA
TGCATTGCCATAATACGTCATTATACGCAGCAATTTTACGAAATTACACG
AGAAATTCGCAAAATTTTTTCAGCGAAAATTACACTTTTTTGCCATTTTA
TACTTTCAGTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020567XLOC_020567Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035246-exon-sc0001278-1575043694:20716..20870TCONS_00035246-exon-sc0001278-1575043694:20716..20870Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1575043694:19687..19842TCONS_00035246-exon-sc0001278-1575043694:19687..19842Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1575043694:17634..17797TCONS_00035246-exon-sc0001278-1575043694:17634..17797Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1575043694:16805..16856TCONS_00035246-exon-sc0001278-1575043694:16805..16856Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1575043694:16079..16324TCONS_00035246-exon-sc0001278-1575043694:16079..16324Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1575043694:8956..9498TCONS_00035246-exon-sc0001278-1575043694:8956..9498Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1510915933:20716..20870TCONS_00035246-exon-sc0001278-1510915933:20716..20870Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1510915933:19687..19842TCONS_00035246-exon-sc0001278-1510915933:19687..19842Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1510915933:17634..17797TCONS_00035246-exon-sc0001278-1510915933:17634..17797Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1510915933:16805..16856TCONS_00035246-exon-sc0001278-1510915933:16805..16856Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1510915933:16079..16324TCONS_00035246-exon-sc0001278-1510915933:16079..16324Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1510915933:8956..9498TCONS_00035246-exon-sc0001278-1510915933:8956..9498Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1491911889:20716..20870TCONS_00035246-exon-sc0001278-1491911889:20716..20870Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1491911889:19687..19842TCONS_00035246-exon-sc0001278-1491911889:19687..19842Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1491911889:17634..17797TCONS_00035246-exon-sc0001278-1491911889:17634..17797Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1491911889:16805..16856TCONS_00035246-exon-sc0001278-1491911889:16805..16856Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1491911889:16079..16324TCONS_00035246-exon-sc0001278-1491911889:16079..16324Clytia hemisphaericaexon
TCONS_00035246-exon-sc0001278-1491911889:8956..9498TCONS_00035246-exon-sc0001278-1491911889:8956..9498Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001278supercontigsc0001278:8956..20870 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.9864	14.6953	22.0505	16.9557	25.1568	18.5936	18.7054	24.1554	10.61	5.82995	6.62254	9.60791	8.18429	4.30555	13.9474	19.3743	9.76544	13.194	2.45292	1.61427	6.21786	7.1305	15.9642	10.4008	3.72085	4.8058	8.91868	7.75394	8.22261	11.6813
Blast
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BLAST of TCONS_00035246 vs. Swiss-Prot (Human)
Match: QOR (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 4.932e-96
Identity = 148/321 (46.11%), Postives = 208/321 (64.80%), Query Frame = 3 
Query:   66 MRGISISELGTIDVMKLVTNLPKPTPTGKQVLINVKYAGVNPVDTYIRSGAFGKATPEFPFTPGYDGSGIVHQIGDQVTQIKEGDRVWFVKCLTGSSAEYCLCNEEAVGGLPEPSSFEVGAMIGTPYMTAYRAIFQKAHVKKGETVLIHGATGGVGNACVQMCKNIGCRVIGTAGSTEGADMLVKLGADAVFNHRTDGYIDKIAKS-GEK-INVIIEMLANVNLQSDLELIEPNGRIAIVGNRGNVEINPRLMMKNEITVTGVMAGAISLEESLQCKEYIKQGLQAGWIKPVLWKAFELQQIGQAHEEIITNKGAKGQMVL 1022
            MR + + E G  +V+KL +++  P P   QVLI V   GVNPV+TYIRSG + +  P  P+TPG D +G++  +GD  +  K+GDRV+    ++G  AEY L  +  V  LPE   F+ GA IG PY TAYRA+   A VK GE+VL+HGA+GGVG A  Q+ +  G +++GTAG+ EG  ++++ GA  VFNHR   YIDKI K  GEK I++IIEMLANVNL  DL L+   GR+ +VG+RG +EINPR  M  E ++ GV   + + EE  Q    ++ G++ GW+KPV+   + L+++ +AHE II   GA G+M+L
Sbjct:    8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 327
The following BLAST results are available for this feature:
BLAST of TCONS_00035246 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QOR4.932e-9646.11Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=... [more]
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