TCONS_00035230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035230
Unique NameTCONS_00035230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length562

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035230 ID=TCONS_00035230|Name=TCONS_00035230|organism=Clytia hemisphaerica|type=transcript|length=562bp
GCTGTTGTTATCGTTCAAGATTTGCTGCAGAAAGTTTGGTTTTGAGGTTG
TAAAAAGAGTTCTTCAAAGCGAAAGAACTCTGGAAACCTCACTTCGTGCT
CACAACTGGACAGCTTGTTCACACTATGTGTGAGATATAAACTGGAGCTT
CAAGCTAAATTTCACTTGGCGACTTGATACGAAACCAGCTGGCAAACACC
ATTANACCTCACTTCGTGCTCACAACTGGACAGCTTGTTCACACTATGTG
TGAGATATAAACTGGAGCTTCAAGCTAAAATTCACTTGGCGACTTGATAC
GAAACCAGCTGGCAAACACCATTATTTCAACGTCGATCCTGCGTAAAGAG
TCAATTCTCAAAgTGTCAGTGAATCTTACTGGAttactttgaaaatttat
tgcaaattttttgaagactGGAGACAGCTCAAGCACTACAATCATCAATG
AAGGAAGATGTAAAAACTTTTATGGCAATGATGTCATACTCCAAATACAT
CAGATTATCATAAAATTAACGTTGCCGTGACACCATAATGTGAATCAGCA
GATTAAAGAGTC
Run BLAST on NCBI

transcript from alignment at sc0001277:26420..46853-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035230 ID=TCONS_00035230|Name=TCONS_00035230|organism=Clytia hemisphaerica|type=transcript|length=20434bp|location=Sequence derived from alignment at sc0001277:26420..46853- (Clytia hemisphaerica)
GCTGTTGTTATCGTTCAAGATTTGCTGCAGAAAGTTTGGTTTTGAGGTAC
CTTTTATTTTACAATTTTCTTCTGGCTTAAGGTTTAAAATCTCCCCTTCT
AAATATAGCTGTAGGCAAAAATTTAGAGACAACTTTCTGCCTTTGTGGTT
TTTTATTCCGGCTGAAAGCGTGGGGTAAATCATCAAAGAATTGACGCACT
AGATCCGGAAATATAGTATTGTATTGGAATTAGAATTTATGTCTCATTCA
TCTTAAAAACTTTACCAGGACGTTGGCAACACGCATATCTCAAAGAGAAC
TCTACTAGAAAAGGATTTATTCAGCTAATGACACCTAAAGCGGGCNCGTA
TTGGAATTAGAAATTATGTCTCATTCATCTTAAAAACTTTATCAAGACGT
TGGCAACATGCATATCTCAAAGAGAACTCTACTAGAAAAGGATTTATTCA
GCTAATGACACCTGAAGCGGGCTGTAAACATATTTTCAAATATTAATTTA
GAAGGTGATTCCTTGTAACCAATTTTTCAGTTTAACAAATTTGTATTTTT
TTAGCCATCTATTATTAATATTTACAATATATTTGACCACAAAGACTTAA
TTTTCACCGGAACATCTCTATTCGTATTTCTAAGCAGGGTCGGATACAGG
AGGTAGGCTATCTTATTCATGGAGAGTAATTTATTTTCCATATGAATTAA
TACGATAATAAAGTGCACTCTCCTCCATTGGTTATAGCCTCCCTCTGTAT
CCGAGCCTGCTAAGGGAAGCACGTTTCACGTCTTTGAAATTTATCTTGGA
AGATTAGGTCTCGGATCATTCATAAACTCTTTCAGTCCTTCATTTTCATG
TTTTTGACAAATCTTATTTTGACTCTGATCCTAAAACAAGCTCTAAAATC
ATATACAGAGTAGTACTCTTGTCTCCCGAATAGACGCCCCCCCCGCTAAT
TGCTAAGAGAAAAAATCCACCCGCTCTTATTAAAACCCCCCCCCCACTAA
TTAAATTTGAATAATATTACCCCCTGCTTATTCGGACCTCCCTGTCTATT
CGGGAAACAAGAGTATATGAGCTATACAGAATTTAAAGTACTTGAAAGTA
ATGCGATGTGAAAGTTCTTGTTTTTTAAACAAAGTATCGTGAATATAGTA
TAAGAAAACCCTATGGTATGAACGGTGTTTGGGATATCAACTTTAACACT
CAATATTGATTTCAAAGATCAGCAAATACGCCGAAGTCTCCAAAAGAGTT
TTAATTCTACTGTGGTTGTGTTTATGTTCCACAATGAGTTAATTAAGTTG
AAAGGGGTTTAGCAATTTTAAAAAGTCAAGTCTCCAGTTTCCATGTTTTC
TTTTTCCTGCTTATATATTCCATTTTAGGTCATAGAGTATTCCTGATCCC
TTTGGGAAACGATGTATGATTGATATATCAATTTTATTTCAGGTTGTAAA
AAGAGTTCTTCAAAGCGAAAGAACTCTGGAAACCTCACTTCGTGCTCACA
ACTGGACAGCTTGTTCACACTATGTGTGAGATATAAACTGGAGCTTCAAG
CTAAATTTCACTTGGCGACTTGATACGAAACCAGCTGGCAAACACCATTA
NACCTCACTTCGTGCTCACAACTGGACAGCTTGTTCACACTATGTGTGAG
ATATAAACTGGAGCTTCAAGCTAAAATTCACTTGGCGACTTGATACGAAA
CCAGCTGGCAAACACCATTATTTCAACGTCGATCCTGCGTAAAGAGTCAA
TTCTCAAAGTACAAATTTTCATTCTATATGGAATGTGTGGTAAAACATTT
GTAGATCTTCGCCCCAACAAATTATCATGTTCTTGCCTCGACAATTTTCT
CCTACAAAACCTTAGAATTACAATGTACATTTTCAGAGGCTTGAAAAGCG
TATTGATAGCTTTAGGGTTCCAATTAATTACTACATATCTCATTATACAC
CCCTGTCTCATACAGTCCCGGTGGAACTTTTTTCCTCAATGGGGATAAAA
ACTCCNATACACCACTGTCTCACAGTCCCGGTGGAACTTTTTTCCTCAGT
GGGGATAAAAACTCCCATTAAAATCCGAATATCCAGATATAAATTCTGTT
GTTCCAAGAAAAATTCAGTGGGATTTCGAATGGGGATGAAATCAAAGTCA
ATTTAGCAGTGGGGCTGAAAATACAGGGTATTTCCCAATGAGGACAAAAT
CTTTCCTAAATTTTCCAGAGGGGCTGGGGTCCCAGCGGGTCTATGATCAA
CATGTGTCATTCAATTTCTTTGAGAACTAAACACTGTACAACGAATACAA
ATCTCTTGACCATGCAAGAAGTATTATCCCTGTCTGTCCTCATAAACTGA
TTTGTGGAGCACAAGACTAACACCAAATCTAGGTAATATTTCATAGTTTT
ATCAAGTGTTAAGTTTATTAAAAAGCGCTGGTTTATTTTTTCATAAATAT
CCCTTTGTAAATTTTGCGGCGCATTTTTTGCTCACGAGTCAACTAATTGA
TAAAGCGCTTCCGCAGCATTAATCTTTGATAAGCAATTCGGCGGGACTCT
AGTGTGACTAACTGGAGTGGCACAAACTTGTCGAACAAAATTACGGGTTA
TCGAACGGATCAAACCGAAACCTATTGATCGAACTTAATCGAACAATCAC
AATTTTTAAAAAAATATTAGAGTTCACTTAACTTTAATCGTTTGATTAGA
TTGATTGTTTGATTAGTTCGACAAGTTCGATTGAATAAGCGGGTCATCAA
ATCGAATTTTTCTTTAAGCATACTACAACAGTTTGCTTTAAAGATCCTTC
TCAAATGTGACAAAACCAGACCTGATCAATCGAACTTTTCAAACTGATCG
AATTAATCAAACTCCATCAAACAATTAAGTTTTAATCAAATAAACTAATT
GAATACTCAAAATGTTGGAATATTATGCCTAATCCTAATAGCTCGCCCTG
ATGATGGCTTAAAAAGGATACAGGAAAAGAGTGTAATCTCATTTGATATT
GGAAGTAATAGTCGTTTTGGGAGATTTCAAAGTCATATTGTTTCAGTTCA
GCATATTGAATACTCCAGCAATTAGGGCCCAAAACTGTTCCGTATTATGG
AAATAAAATCCTGATAATTGAGCTTATACTTATAGGATGTTGTGCGGGAA
GATTCACACCGTTATTGTGTGCTAATTTATTCATAGGTAATATCTGATTT
CCCGTTTGCATCCACTGAAGTCTGGAGTAATTACTTTCTTTAAGGTTACT
TGAAATTAATTTTTCTCAGTATCGAGACCACCAATCTTGTTGAGGTACCA
GTGTTGTTGTAAGGGTGCCATGAATGACACAGTGTTTGATTTTTCCTAAT
TTTTTGCACGGAGATGCATATTCAGGCACAGTAGCAATACCAAAAAATAT
CGCCAAATCTGACTAAGAAGAATTTTTTAAGCCATACATGACAGAAATAT
GTTAAAAATCACGGATTTCGCACACTTTGAATTATGTTTTCATTATTTCT
CTTTATTTATTCAGACAAACACATTATTCATAGCAGTGTTCAAGATTAAG
CATGGTTTGGGTGGTCAAGCTGAGTGATGGACACATATTAGATGTATGTT
CGTCCGGCGCCTCATAGGATAGCCTCTCCTCAGAAGTCAACCCTCTCCCT
CCACGCGGTGTCCACCTGGTTAAAACAAATCGAGGGCTCTGGCGACAGGT
CAAGTATTCGGCGTCCTGTATAAATAACTAATAGTTTACTTGCTGGCTTA
TTCGGTTTTACTGTGAGGTTTGACTGAAGTGAGAGTCTGCTGATTTAGTA
TCGGGGTGGTTTATTGACAAGTGGTTAACACTTTTTGGTTTCATTGTTCT
CTTGATCCAATATATTTCCGATCTTTGCGCAGACTCGATCTTCTGACGCT
TGCATATAGACGAGAGCGGAACGACATGATTGAAATATACAAAAATTTCA
ATGTCTACGATAGATCTTCACTACACAAAACCTTTCAGCACCAGATGCGT
GTCACATGGAACCATGAACACGACCTTCAACTCATTGAGCGAATCCCAAA
AGATGGCGCGAGAGGTGTACAGTTCAATTCATTTTGTCATCGAACAATCA
ATCCTTGGAATAATCTACCAGCCGACGTCGTCAAATCCAAAACCGTGTTC
CAATTCAAGGTTAACCTGGACGAAGCATGGAAAGAAAGACCGCAAAGACT
CCAGCAACCAAACGGGATAGAAGAGAACTTTTGAATTCCGGACTTAACGT
AACGAATTTTTTGTAAACAACTTTATTGTAGATCCTTTCGGAGAAGCAGA
AATGCCTGTGAAGGGGAATTCATTAAATAAATAAATGAATGAAATGAATA
AATAGATATTGTCGGGTGATCAGGTGATCATGTATTACACTGTGTCTTCC
GGTGAGTTGTTATCTCTGTAAAAATACTCAGTCCTGCAACTGTGAGTAGG
TTGACGACAGGAAGGACATCCGGTCATAAAACCCATGCATCAACTCTTCT
TCAAAGTCCTTTCTCTGTAACTCAAGGTGTTTTCCGTGTCAATGAGTGAA
TGGCTATACATAGTTAGTCGCGAACGGTTGCGTATTCTGTGGCGAGTAGC
CTAATCTAGTGTGCTGGGTAACTAAGATGGGCTTTATTGGTCATGGGCTT
TAAAGGTCATTCAGCCAGAGAAATCAGTGGTAAAAACAGCAAATATAAAT
TTTTCTGGTGTGGTGATGTTGCTGGTTATGATGGTGCTGGTATCCTTCTT
GATGAAGCTTTTATCGAAAATGTTATATCAGTTGAACGTGTAAACAGTAG
GATTATGTATATCTGTATCATGATAGAGAAATCAATCATCCGTTTCTTCA
GTGTCTCTGTACCTCAAACTGGTCTTCCTGAATCTGAGAAAGACAAATTT
TATAATGATCTCTTGGCTCAAACGGCCATAACTCCAGCAAAGTAATTTTC
AATAATATGTGGTGATCTCAAAATGGTCATGTTGGCAAGGATACAGCTGC
AATCGGGGAAATAAATGTTGGCCAGAAATCAATTTCAAAGGTAATTCCCC
CCTGCCCCCAAAACTCAATGTTGAGAGTCTATTCATCCCAAAAATGTGAC
GGTTTTTCAGTTTAACCTCAACATTGAGACTGGGGGACGGGGGTGCCGCT
TTGGAGTTAAATTTCATGAAGATTTTGGCCAACTATTTATTTCCCCGATT
GTGGCTTCGACAATGTTCATGGTGGAAATGGTTATGGTCCTAGAAATGCT
GACGGTGTTAGGTCTCTAGACTTCTGTTTAGCTGCTAATCTATCTAGCAC
AAACACTTTCATTTCCAAACCAGCCAGTAAATTGATCACTTACTAGTCTG
GACCATCTGTTTCTCAAATAGATTTCATTCTTATCCCTTGTAACCACCTT
AAATTAGTTCATAATGTTACTGTTATAAATGGGGAAAAATGTACACCCCA
GCACAAATTAATTATTGGTGACATGAAACCTTCCCTAGATGTGTCTGGAA
ACTGAAAGACCCTGCTTTGTCCGAAGTCTTTCGTGAATGTGTTGACGCTA
AATTACAAAACGTTGTCATTGCCAACGATATTGAGTCTTGGAATATATTA
AAGTCTTCCATTCTCGAGTCATTTGATACAACCTATGGTTGGTCTAAATC
GCAACAAGGTGTAAAGAAAATCGGTGGTGAAATGAAACCGTTGATTTTGC
GGTGAAAGAAAAGTGCAGACTTTGGAAATGTTGGAAACAAGGTGGTCAGA
AAGAGCCCTACTTGGATGTCAAACGTAGAGCGAAGTCTGGGGTTTATATT
GCTAAGAAAAATGCTTCTGATGAAAGATTTTGCTATCTTCATAACAAGGA
TAAGCTGAATCATGTTTTCCAGCTTGCCAGAAAGTTAAAATCTGAAAATC
AGGACATTGTTGGCAAGAAATTTATCAAGAATAAAGAAGATGTCATTGTG
TATGATGATAAGTCGAAATTAGATGTTTGGAAGCAACATTACGCGGTACT
TTTGAATTCGGAGTTCAATTGGGACGAAATTGTTCTCTCTCATGCAGAGC
TCATCATAGGTCCCCCGTTAAAAATTCCGCAGGAAATGGTACTATCAGCT
ATAAAGAAAATGAAGTCTTGCAAATCTGTGGGCCCTAGTAGCATTTTTCC
GGTCATTCTCAAGATCTCATGTGACAGTGTTGATCCAAAACTAACACCAC
TTATAAATATGGTCATTCGTGAAGGTAAAGTTCCTGTAGAATGGAATGAA
TCTTTCATTATCAGTCTGTACAAAGGTAAAGGTGACTCACTAGAGTGTGG
CAACCGTCGTGGTCTCAAGTTGCTTGAAGTTTCACTTAAAGTTCCTGAAC
ATATTCTCGAAATTCGTGTCAAAGAGCAAATCTCAATCGATGAGATGCAA
TTCGGCTTCATGCCTGGTCGTGGTACGACTGATGCTATTTCTATTCTTCG
ACAGCTACAAGAAAAATATCTAGGCAAAAGGAAAGATATATTGTCTTCGC
CTTCGTAGATTTGGAAAAGGCCTTTGATCGCATTCCAAGGAAGGTACTAT
GGTGCGCTATGCTTAGCCTTGGTGTCCCTAAATGGATTGTACAAACTGTT
CAAGCGATTAATAACGGTCCAAAATCGTGTGTCAGGATCAATGGTCAGTT
TAGTGAAGAATTTAACGCAAAGGTTGGTATCCATCAAGACTCAGTCTTAA
GTCCTCTGTTATTCATAATTATTATGGAGGCTCTGTCCCGAGAATTTCGA
ACTGGCTGTCCCTGGGAATTACCGTACGCTGATGATCTTGTTATTATTGC
TGAATCAAAGAATGAGCTTTTGTTAAAGCTTCCTTCGTGAAAACAAGAAA
TTGAAGCTAATGGCCTTATTGTTAACACTCGTAAGACCAAGGTTATGCAC
TGCATAATGGCCTGAGTGAAGGACAAAAATTAAGTAAATGACCTTGTGGT
GTTCTTTATAAGGGTGTAGGAAGCAATTCTATTCTATGTAGTAGATATCA
ATGCTACATACACAAACGTTGCTATAGGATAAAAGGTCACCTAAAAGGAG
ACTTGAATTATGTATGTCCAGTCTGTTTAAATCATGTTGATGTGCCTCCT
CCTACTGTTTTTGCTATAGATAGTTTAATGTTGAAGTTGTACAGAGATTT
TTTTATCTCGGTGATATGATTGAAAACAATGGTGGCTGCTTTAATGCCAT
TACTTCCCGTGTCAGNATAAAATATACTATCAAAACATTTCATCATGCCA
GCCAAGCAAAGCACACCAATAAAACAAATATCAAAACCAAAGACCAATGG
TCATTGTATAAAAAGTCCATTTTCAACATAACCAATATCAACTGGAACAA
ATATATCCATCAATAATCGATCGCGAACCAGAAACTTTCAATAAATCAAA
ATCATCATAACTATTTAAATACCATTCTCATCAATATAAACCAAAACATA
TCTCACCATGTAATCAACATATCAAATACCAATATCGAATAACATTAACA
ACATCCTCTCATGGAGGACGTAGCCTTCCAGAAACAAGAACTTGATTTAA
TTTACTGGAAGACGCTCCCCGTTTCGTAAGGGAGTCAGCTAATTGCTTCG
AAGCTTCGATCCACTTGATGGACATTTTATTATCGTGTATCATTTCATAA
ATGACACCCATTTCAATGCGTAGCCTTTTCTCCGATACCATAGTTGTTGA
GTGAACATTTTGTACCAGAGATTTGTTGTCGACAAATGACTTTATGGGGA
TTCGATTCTGTTGATCAGATTTACCGTAAATCAATTCTGTTAGAAGACAT
CCGATAACGAAAACACTTTCACAACCATCAGCAAGTGACAATGTTTCTGC
AGCAAGGGTGCTTCTCACGACACGTTTAATCTTTGTAGACGACCAGGAAA
TGGGACAGCATTTATCTCCTTCGCCGAAGAGAAAAACAACTCGACCACCA
GTACTGGAAGTTCCGTCAGGAAGATTGGCGAACGATGCATCATTGAATAA
CATTAGCTTAAGATTACTCAGTTCTCCAAGACGTGGGAACTTGATTTGTA
ACGCTTCAGATTTCAACTTTCTGATGACTTTATTCGCTTGAAGTAAATGA
TCTACTGTGGCTCGATTGGTTATCATACTCAGTTCAAGAACGTCATATGA
AAGATCTGGTCGTGTCTGTGTTGCGACCCAATTCAATTGACCGATTGCTG
TTCTCAAAAGTTTTTCCTCTTCGGATGTCACTTTATCGTTCTTTCGTAAC
TTTCTCGATGGCGTGATTGGAATCTCCTTCATTGACTTTACGTAGATCGA
TTGCGATAAAGTTGTTTCATTTTGGTTGGTCGAAACTTCCAATCCGATGT
ATTTGAAAATATCAGTTCCCTTAGAACCAACTTTGTAAATTTCACACACC
TTCTTCACAACAGTCTTTAAGAAGGTCTGTGAACCAGCATACAAAAAGTC
ATCAACATGTAGGATAAACATTCCTGCAAGCTGGTTAGATGAATCACGCC
ACATGAACAGTGCTTTGTCGATGGTTGATTGTACGCATCCAAGTTTTAGT
AGTGTTTCTCGAATCGTAAAATACCAATTACGGGATGCATCGTTGAGCCC
ATACACTACTTTTCGTAGCTTCCAAACTAGGTTCTCAGCTACTTTTGCTT
CAGTGGGGGGTTTGACATAGATTTCACGATGGATGTCTTCTCCTTGTAAA
AACGCTGACTTAATATCAATCATTTCGATAGGCCATTGCTTTGTAGAGGC
AATAGCAAAACATGTGCGAAGAGAGTCCTTGGATATTGTGGGAGAGTCAC
TTGGTATATCTGATGTCTCTTCAAATCCTCTCACTACAAGTCGAGCTTTA
ACTGTAAGGTTAGGTTTGGGTTGTTTCTCAGTCACTACCCATCTTGTTGA
AATCAAGGGTTGGTTTTCGAATTCAACCGGTTCATATACGTCAAATGACT
TCCAATTAAGAAGCTCTTTTTCTTTAGCTTCTTTGACAAGTTCTCTTTCT
TGGTCATTTGTGGGATGAAATATAGCATTGAAATTGACACTTTCACTGGT
ATTTTCCCATTCAATCGCTGAAAAGTCAAGACATGAATGTTCACCATTTT
CTACATTTTCGACATTGAACCACGATGCAAACTTTCCTGTCGCTTTACCT
CCTCTGCTGATGATACGGGCAGTTTCCCATTCAGAGTTATTTTGTTTAAT
ACGCACAATGTCCTGTAGTCTAGGAAAAAGTTGTCTTTCTGATACAGCTG
CAGGCATTGGTGGTGGTACTACATGTGTTTGATCTGAGGTGGGAGGTATA
GGAGCATCATCTTCATACTGAATTGTCACTGGGATGTCAATCGGTTCTGT
AGATCCGGTATCGATGATTTCCGATTTGTCACATGCTGTTGGGACTGTAA
CTTTGGAGTTAATACGTTTGGTTGGATTACTGTTTGGATTTGGGTTGAAT
TCTTCTCCGACTTTGAGGATTCGACAACTGGGAACTCTTACATAAACACT
TCCATGGCGGACAAAGATAGTTTTTCCGTCCTGACCAATAACTTTTCCAG
GACCTTTCCATTTGTTGCTAGACTCTCGTTTGTAGTATACAGCATCACCG
ACTTCGAAAATTTCGCTATGGCTTCGTAACTGATGTCGCAATGCACGCCT
GATTCGCTCTGATGATTCAGCTTTTATAAATGCACGTCTCCCTGAGTGTA
GACTGTTAAGATGTTGATAGAAACGTTCAGATGTTGTTGTACCCTCTAAA
GCTGGTGGCATATCGACGATCACGGATGGAAGATTAGGATTTTGTCCAAA
CAAAAGCTGATAGGAACTGTAGCCAGAGTTCATTTGTAAACAGTTTTTTG
CATGAATTGCCCATACTAGGGCAACATCGGGTTTCATTTTTGGGTTTTCT
TCCAGGACCTTTTGCAAACATTCATCAACAACGGCATGGTTACGTTCACA
TAATCCATTTTGCCATGGACTTTCTGCTGCAGTGTTTCTGACTTCGATAT
TAAGGTTAGCACACATATCCTTATACTCTTCATTTGCAAATTCACCACCG
TTATCTGCTAGAAATTTCACTGGACAACCGAATCCTGATCCGATCCACAT
AAGCATGACTTTATCTACAATGGTCGACGGCTTTTTATCGTTTATAAATC
TGGACATGGTGAATCTTGTAGCTGCATCGATTAAATGAAGAATGTATTTA
CCGTCTTCCCACTTCTTGAGATCCATCACTACGACTTCATTGAAGGTGGT
GGCTAATGGTAAACTGACAACTGGCCTTGCAGGAGTTTTCTTAAATTTAC
GACAAATTTGACAATCAGCTGAAATAGCATCAATCACTTTGGAGCAAACT
GGCGACAGAACTCCTGCATCTCGTAATAAACCTTTTAAGCGTTTCGGGGA
CGGATGAGCAAACTGCTTATGAAGTTTTGTGACAACTGCGGAAATTTCCT
TATCGCTTTCGACACCGGTAAAGCAACATTCTATGTCAATAGATGTGTCT
CTCAAAGGGATGCAATAATGGCCTGCTGATGTACTTTGTAGGTTAACAAC
ATTTCCGTAAATTTCAGCTTTATCGTTCACCAAATCAAGTTTCATTCCTG
CTTTTTTCATTGCATTTTTACTTAAAAGCATCGGAATATCACTATCAATA
ATATCTGTTTCAATGGTGCATCTTTGTCCGGCAAGGTAGCAGGGCAACAA
TGCTTTACCTTTTGATTTGAGTCGTTCACCACCTCCAAACTTGTAAATAG
TTTCACTATCTTTGTAAATAATCTCACTTTTTTCACTGTCACTTAGTGAG
TCGATAAAACACTCTATCCAATCTTGTCCAGAAACTGTCGACGAGCATCC
ACTGTCGAGAACGGCAGCATTGGTAGATTCTGTTAACAACACTGTCATTT
CATCATTATTTTGGCCCGTAAACAGAGCAAATTGTTCAGTCTCTATGTAG
AATGAATGTTCAAGATTTTCATAAGCATGAGGGCAATCTTTCACGAAATG
TAATGTTGAATCGCATGCCATACAGCGGAGTATGTTTCCATCACCATCCA
ATGGGTTCGTTTTGCGACTGGTGGATTGACCTCTTCCTCTGTTGAACGGT
CTGTTTTGGTAGTTGGTGAAACGTCCTCTGCCTCGTCCTCTGCCACGACC
GCGATTTGGAAATTTCTGTTTGAAAGTGATGTTAGCTTCCTCCTGGTTCG
ATTCATGGATATCCAATTTGATGCTTTTAGATGGTTCGGTTGCGATGGGT
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGTCAATAACGCTGAATAATATAAAAGCCCCACAGCCACACCAAAT
GCTAATATTAATATATACTAGCCTATAACGATAAGAAGAATATGAACGTT
AACATCAGGTAGGCATGGAAGAAATTCAGGGAGTTACTTCCAATTTTAAC
AAATAAAAATATTTCTATCAAGTGTCGTGGTCGTGTATTCTCATCTGCTG
CGAGAGGTGTCATGTTACATGCAAGCACACCTTGGGTTGTAACTGTGGAT
GGTTGAAGCAGGCTTGTTCGCAATGATAATTTTATGATTAGGTAGATTTG
TTCAACACGTTTGTCAGAAAGGGTATTTATGACTGTTCTTTGAGATGGGC
TTGACATCGCTCCGATTGACGATTTGCTACGTTAAGGAAGGCTGCACTGG
TTCCAGTGTATGACAGGAAAATATTTTGAGCTCGTATTTAAAACAATGCA
CTCAACATGCACCATTTCTTGTATGATCTTGTGTAACCCTGGCATTAATT
TGCTTAGACCGTGCATAGTAGTGATTGTTGTGTTGTTTTGATTACTTTCA
AAATGAAGAGAGCCAATGACGGGAAAATTTTTTGAACTTGTATTCACGAC
AATTCACTCAACATGCTCCATTTTTTTTGATAAAAAGTGAAACCCTGGCA
TTCATTTGCTTAGACCGAGCATAGCATTGAATATTGCGTTTACATGCTTT
CAGAATGAACAGAGCCAATGAAGGGAAAATATTTTGAAATTGTATTCACG
ACAATTCACTCAACATGCTCCATTTTTTAAAATAAAAAGTGAAACCCTGG
CATTCATTTGCTTAGACCGAGCATAGCAGTGAATATCATGTTTACATGCT
TTCAGAATGAACAGAGCCAATGACGGAAAATATTTTGAACTTGTTTTCAC
GACAATTCACTCAACATGCTCCATTTTTTTAAATAAAAAGTGAAAACCTG
GCATTCATTTGCTTAGACCGAGCATAGCATTGAATATTGTGTTTACATGC
TTTCAGAATGAACAGAGCCAATGACGGAAAATATTTTGAACTTGTATTCA
CGACAACTCACTCAACATGCTCCATTTTTTTAAAAAGTGAAACCCTGGCA
TTCATTTGCTTAGACCGAGCATAGCAGTGAATAATGTGTTTGCATGCTTT
CAGAATTGACAGAGCTAATGACGGAAAATATTTTGAACTTGTATTCACGA
CAATTTACTCAACATGCTCCATTTTTTTTTATAAAAAGTGAAACCCTGGC
ATTCATTTGCTTAGACCGAGCATAGCATTGAATATTGTGTTTACATGCTT
TCAGAATGAACAGAGCCAATGACGGAAAATATTTTGAACTTGTATTCACG
ACAACTCACTCAACATGCTCCATTTTTTAAATCAAAAAGTGAAACCCTGG
CATTCATTTGCTTAGACCGAGCATAGCAGTGAAGTGGGGGGCGTACGGGA
AAGCGGTTTTGAGCGGTTTATCGGTTTCGGTCCTTTTTTTTGTCGGTTTA
TCGGTGAACAACCCTAAATTCGTGCGGTTATCGGTGAAGGAAAATTATGC
CGGTGTCGGTGATTTCAATTTTATTTTACGGTTTGGTGGTGAAAGACCAG
CATTTTGGCGGTTTTTCGGTGATAGAAAATCACTACGGTGTCGGTGATTT
TTATCTTTTACGCCTCGGTGGCGGTGGCGTAGCTATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NGGCTTTTTTCCAACTGAATTTTCAAAAATTCCAAGCCATGGAAAATGCA
ACATTTCCAACCTTGGACAATGTCCCACATTTTCAGGTTGGATTTTCCAT
TGGATTTTGTCTTTTTTCCAACTAAGAAAACTTGAAATTTCCAACCTTGG
AAATCGAAAATTTTTTCCTGTGTATTGGGCGCAATATTTTCACCTGTCTC
CGCCATTATTTTTACCGCGAAAGGCTGATTGCTCCACAACAGAATTGAAT
ATCCTTTTCTACGATCTCTTTTACATTTTTAACGCAGCCTGATTGGTTGG
ATTATGCAGCTCTTTATTCTGATTGGCTAGATTATGTGGACTTTATGAAG
TGCGGCTGAAAATGCTCGAAAAAATAGATTTCGTTTTTTTTTTTTTGGTT
CGCTTTGGTTTTGGCTGCCCTTGATCTTTGCTGCTGTCTGGTTGCTATTC
AAAGTACAGTCAAACCCAAGAAAATGGAGGAGTCAAGTAGCTCGAAATCA
AAATCAAATACGATTGAATGCCGTGCCATTTTTTACCAGTTTGGAAAATC
TGGGAAAAACTACATTGAGTCTTTCGAATTTCGGGGTCAATTTGAAGATG
AAGTTCTTAACTCGTGTAAACGATTCAAAGATGCTATACGGTAAGTTTTT
TATTCCATACTTTTTTTTATATATTGGCTGATTAGATCATAGATGTACGC
TATGTTTCAGAGTATAAAATTACTATTAATTAAAAAATGCTACCAATATA
GTACGGAATGATACAAGAATTTTCCAGAGAATAAACTGATAGCTTACTAT
AACTTTAAAACTTGAATCTTTTTCTTCTTAGAGAAATACGAATTGAAATC
ATTGCCTGAGGCTATTGGTATGGTATCAGAATCCCTATCTTCCGTCTCAT
CGTTTGAGAAAGATATACGCAAGACGGAAACAAACCTTCCAGTTTCGTTA
ACCGGAGCTCATGGTTTCGTCTCGACAAAGTCATTTGTTTCACTTCAGTT
AACGAAATGGTCACTGGAGAAGTTGTCTGAAACTTGTTCTTCATTCAAGT
ACAACCAGACGAATATGCTAAGCATGATGACGCTCTCTGTGGAACATTTT
CATTCTACCACACATACAAAACAAGTTCTAATGAGTCAACTTCAATACGC
CCGGGAATTCATGACGTCGGTAAAAGAGTCATTGAAAAGGCTTGGCTCCT
TGGTCGGTTCACTATTTTACCTCAAGAAAAGGGAGCTGGTACCCGGCCAC
CGAAAGTTCAATCGATTTTAACGAACTTTCTGGTGTGCTACCCAAGAAAC
ATATCGCTGTCCAAATCCCCAAAAATGAAGAGGAAAAGCTTAGAGTTTGG
GCTGATAGTTACACACGTGCCGTCCGCCAGCGCAGTGTTCGCCAGGAAAC
AACTATGGCAAAGTGTGGAACACTCCCAACATATTTATATACGGATAAAG
TAGACGAAATTGCTCAAGCTACTGATCCATACAACTACAAACACCCAAGG
AAAAGCAAAGATGCTGCAGACATACAAATGAATTCAATCGCCCCAAATTT
ACAAACGAATTCAATCGCGGCTGACCTACAAACCAATTCACTCGCCGTAG
ACGTACAAACCAATTCACTCGTCGCAGACGTACAAACCAATTCACTCGTC
GCAGACGTACAAACCAATTCACTCGCAGCAAACGTACAAACCAATTCACT
CGCCACAGACGTACAGACAAACTCGATCGCCACAGACGAACAAACGATTA
TTGCCGAAGAGGAGCAGCCAGATTCGTTCGATCCTGATAGTGGTGATGAA
CAGACAGCTGAATCATCAACTTTAGGTGGCTTGGACGAGGCAACATTTTT
CATGGTTGGTCGATCAACCAGATTTGGACGTAAAATTAAAGTTAACTCAA
AATTTATCTCTTAATGCCTTAATCATTCACAAGACTTTTTTATGACTTTT
CTAGTGTTTTTAGTTAACGATTTGAAACCTTTTATGAAATTAGCGTACAG
TACTTAGCGCCTGTCTAGATGGAGATTCAGTACAGAGCGAACAACCCACT
TTTATAACCTCGTACGCCTAACGGGTTTCAGGATATCCCCTGATGCTGTA
GTGAGATTTTGTAAATTTGATTGAAAGCTTCAGTACGCCAGGTACCGAAA
CTCAATGTAAACGGACTGTTAACCAGTTTTTTATTTTTTAATAGAATTTG
ACCTCGCTCAAAACTAGAATTTTATTACGTAAATTAGTAAATTTAGTATT
TGTTGCTACAATAGCTATACAACGACAATCTGAATTTATATCTGGAAAAT
TCTATCATTCTTAGCTTTAGTCTATTCCCAGTCTATGCCCTTAATAAGCG
AATGTTTGAAAAACCTTAGTTCTGGCAGCAATTGTCCAGTCTCCTTTTGT
TTCGAAAAATCGGTGTCGGTGAAGTGGGAAAAAATTGTCGATTTATCGGT
GACGGAGCTATTTTTGCGCGGTTTATCGGTTTTTGAGAGTCCCGTACGCC
CCCCACAGTGAATATCGTGTTTACATGCTTTCAGAATGAACAGAGCCAAA
GACGGGAAAATATTCTGAACTTGTATTCAAAACAATTCACTCAACATGCT
CCATTTTTTTTTAAAGTGAAACCCTGGCATTCATTTGCTTAGACCGAGCA
TAGCAGTGAATATCGTGTTTACATGCTTTCAGAATGAACAGAGCCAAAGA
CGGGAAAATATTCTGAACTTGTATTCAAAACAATTCACTCAACATGCTCC
ATTTTTTTTTAAAGTGAAACCCTAGCATTCATTTGCTTAGACCGAGCATA
GCAGTGAATAATGTGTTTACATGCTTTCAGAATGAACAGAGCCAATGATG
GAAACTATTTTGAACTTGTATTCACGAAAATTCACTCAACATGCTCAATT
TTTTTAAACAAAAAGTAAAACCCTGGCATTCATTTGCTTAGACCGAGCAT
AGCATTGAATAATGTGTTTACATGCTTTCAGAATGAACAGAGCCAATGAT
GGAAACTATTTTGAAANTGTTTACATGCTTTCAGAATGAACAGAGCCAAT
GACGGAAAATATTTTGAACTTGTATTCACGACAACTCACTCAACATGCTC
CATTTTTTAAATCAAAAAGTGAAACCCTGGCATTCATTTGCTTAGACCGA
GCATAGCATTGAATATCGTGTTTACATGCTTTCAGAATGAACAGAGCCAA
AGACGGAAAATATTTTGAACTTGTATTCACGACAATTCACTCAACATGCT
CCATTTTTTTTTAAAGTGAAACCCTGGCATTCATTTGCTTAGACCGAGCN
ATTCACTCAACATGCTCCATTTTTTAAAATAAAAAGTGAAACCCTGGCAT
TCATTTGCTTAGACCGAGCATAGCAGTGAATAATGTGTTTACATGCTTTT
AGAATGAACAGTGCCAATGACGGAAAATATTTTGAACTTGTATTCACGAC
AATTCACTCAACATGCTCCATTTATTTTAATAAAAAGTGAAACCCTGGCA
TTCATTTGCTTAGACCGAGCATAGCAGTGAATATTGTGTTTACATGCTTT
CAGAATGAACAGAGCCAATGACGGGAAATATTTTGAGCTTGTATTCACAA
CAATTCAAAAGCAAAAACACCAGAGGAAAAAGGAAACAGCGAAAAGACAA
AAAGATCGTCATCCGCATATTATGGTCAAGATGACAATTTTTGTTGGCCT
TTAAAAAGCCTGGAGGTGGATACTTATAGTAACTAATTTTGTTTAAATTT
TATCTTTAGGTATAATAGATCAAATAAGCACCAGAATACCCCTGTTCATT
GCTTTGATTTTTTTATTACTTTATTTTTTAATAGGTGTCAGTGAATCTTA
CTGGATTACTTTGAAAATTTATTGCAAATTTTTTGAAGACTGGAGACAGC
TCAAGCACTACAATCATCAATGAAGGAAGATGTAAAAACTTTTATGGCAA
TGATGTCATACTCCAAATACATCAGATTATCATAAAATTAACGTTGCCGT
GACACCATAATGTGAATCAGCAGATTAAAGAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020554XLOC_020554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035230-exon-sc0001277-1575043694:46808..46853TCONS_00035230-exon-sc0001277-1575043694:46808..46853Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1575043694:45096..45411TCONS_00035230-exon-sc0001277-1575043694:45096..45411Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1575043694:26420..26619TCONS_00035230-exon-sc0001277-1575043694:26420..26619Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1510915933:46808..46853TCONS_00035230-exon-sc0001277-1510915933:46808..46853Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1510915933:45096..45411TCONS_00035230-exon-sc0001277-1510915933:45096..45411Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1510915933:26420..26619TCONS_00035230-exon-sc0001277-1510915933:26420..26619Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1491911889:46808..46853TCONS_00035230-exon-sc0001277-1491911889:46808..46853Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1491911889:45096..45411TCONS_00035230-exon-sc0001277-1491911889:45096..45411Clytia hemisphaericaexon
TCONS_00035230-exon-sc0001277-1491911889:26420..26619TCONS_00035230-exon-sc0001277-1491911889:26420..26619Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001277supercontigsc0001277:26420..46853 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.417208	0.963648	0	0	0	0	0	0	0	0.104905	0	0	0	0	0.0587141	0.122488	0.191264	0	0.226486	0	0	0	0	0.791401	0.107906	0	0	0	0.331824	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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