TCONS_00035220 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035220
Unique NameTCONS_00035220
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2599

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035220 ID=TCONS_00035220|Name=TCONS_00035220|organism=Clytia hemisphaerica|type=transcript|length=2599bp
TCAGTATTCACTGGGAAGTTTGTTAAGATTTTTGTCAAGTTGTATATTAT
GTCTTTTAGATAAGTAAAATAACAATAGCATGCAATTTTGATCAAAACCA
TGCTGAGATCACAACTTGGAAGTCTGAACAGAATTGCACGTGCTGGTACC
GAAGCAGGAATCAGAACTGTTGCTGTATATTCGGAACAAGATGCCAAACA
AATCCATCGTCAGAAGGCTGATGAAGCATACTTGATTGGAAAAGGGATGC
CACCTGTTGCTGCTTATTTGAATATCCCTGAAATCATAAAGATTGCAAAG
aaacacGATGTTGATGCTATTCATCCAGGTTATGGCTTCTTGTCAGAAAG
ACATGACTTTGCCAGAGCTTGCATTAAAAATGGTATTAAGTTTGTCGGAC
CAACTCCAGATGTCATTCACTTGATGGGGGATAAGATAGAAGCTCGAAAG
ACTGCAATTGCAAATAATGTTCCTGTAATTCCTGGAACAGAAAGCCCTGT
CAAAAGTTTAGATGAGGTCAAAGAATTTTGTGAGGAATTTGGATATCCAA
TTATGTTGAAAGCAGCTTATGGAGGTGGTGGCCGTGGAATGAGAGTTGTT
AGCTGTGCTGAGGATCTGGAGAAAATGTATGATCTTGCAACTTCTGAAGC
TTTGGCTGCTTTTGGAGATGGCTCAATGTTTATTGAACGATTCATTGCCA
ACCCAAGACACATTGAAATTCAAGTCCTCGGTGACAAATACGGCAATGTT
GTCCACTTATTTGAAAGAGATTGTTCAGTTCAGAGAAGACATCAAAAAGT
CATTGAAATTGCACCAGCTGCAGACATGAGTGAGGAGACACGAAAAACAT
TACAAGATTGTGCTGTCAGATTATGTGAATCTGTTGGTTATGAAAATGCT
GGAACTGTTGAGTTCTTACTGGATGATCAAGGCAATCATTATTTCATCGA
GGTCAACGCTCGTCTTCAAGTTGAACACACAGTTACTGAAGAAATCACTG
GAATCGATTTGGTCCGTGCGCAGATCGGTATTGCCGAGGGCCAGTCTTTA
GAAGAGCTTGGTTTAACACAAGACAAAATCAAATGTGATGGGTATGCTAT
TCAAGCTAGGATCACCACCGAAGATCCTGCCAATAACTTCACACCTGATA
CTGGACGACTTGAGGTGTTCAGATCTGGTGAAGGCATGGGCATCCGCTTG
GATGGTGCATCCACATACTCTGGTGCTGTGGTATCTCCACATTACGATTC
TTTGTTGGTCAAAGTTATCTCACATGCCAAGGAACATTACGAAGCTGCTA
ATAAATTGGCTCGATCGTTGAGAGAATTCAGAATTCGTGGTGTAAAGACC
AACATTCCATTCGTTTTGAACGTCCTACAACATCCAGAATTTCTTCATGG
TTCAGTGGCTACAGATTTCATCTTCAAGAATCCTGCTCTCTTGGACATCA
AACCCACACAAAATCGCGCTCACAAATTATCATATTATCTTGCCAACACT
ATCGTTAACGGTCCATGTACACCATTAGCTACTGATATGCTCCCATCAAA
GATTGAGCCTGTCCCTCCAAATCACAAAGACGGCCGACGTGGAGTTGTCA
ACAAGCCAACCGGATTCCGCGATATTCTACAGACCTTTGGACCGGAAGGT
TTAGCAAAAGCTGTCAGACGTGAAAACCGTCTCCTGTTAACAGACACTAC
TTTCCGTGATGCACATCAATCGCTCTTAGCTACCCGCGTACGAACGCACG
ACCTGTTGAAGATTTCACCCTTTGTTGCACAGAAGTTTGCCAACCTCTTC
AGTTTGGAATGTTGGGGAGgagCCACTTTCGATGTTTCAATGAGGTTCTT
AAAAGAATGCCCCTGGGAGCGACTAGTACGTCTGCGAGAAGCCATTCCAA
ACATTCCCTTCCAAATGTTGTTACGTGGAGCCAACGCTGTCGGATACAAG
AATTATCCTGACAACGCCGTCTTTGAGTTTTGCCGATTGGCCAACAAGCA
TGGGTTGGATGTTTTCCGTGTTTTTGATGCTTTGAATTACTTGCCAAATC
TCCAGCTTGGTATTGACGCTGCAGGGGAAGCAGGAGGTGTAGTTGAAGGA
GCCATCTGTTACACTGGTGATTTGTGTTCACCCAATGAAACGAAGTATAC
GATAGATTATTATATGGAAATAGCTTCCGAACTTGTCAAGTCTGGAATTC
ATATCCTCTGTATCAAAGACATGGCAGGTTTATTGAAACCTGATGCTGCT
GCTCTCTTAGTGGGTTCACTACGTGCACAATACCCCAAACTTCCCATTCA
TATTCACACGCACGACACAGCTGGTGCTGGTGTTGCATCAATGTTGGCAT
GCGCTGAAGCTGGTGCTGATATTGTGGATTGTGCTGTCGATTCCATGTCT
GGCATGACTTCTCAGCCGAGTATGGGTGCTATCGTCGCCAGTCTACAAAA
TACTGAATCTGATACCGAACTTCAATTGAGTGATATTGGCAAATACAATA
CGTACTGGGAGCAAACAAGAACACTGTATGCACCTTTTGAATGTACCACC
AGTATGAAGTCTGGCAATTCTGATGTCTACCTCAATGAAATTCCTGGTG
Run BLAST on NCBI

transcript from alignment at sc0001275:14249..21478-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035220 ID=TCONS_00035220|Name=TCONS_00035220|organism=Clytia hemisphaerica|type=transcript|length=7230bp|location=Sequence derived from alignment at sc0001275:14249..21478- (Clytia hemisphaerica)
TCAGTATTCACTGGGAAGTTTGTTAAGATTTTTGTCAAGTTGTATATTAT GTCTTTTAGATAAGTAAAATAACAATAGCATGCAATTTTGATCAAAACCA TGCTGAGATCACAACTTGGAAGTCTGAACAGGTACTCTTCTTACTGTGCA TACAAAACTGCAACCAAAACACCAGCCTATCTTCAGTTATGTCGCTATAA AAGTACCACAAATGTTGTTGAAAAAAGTAAAATCAATAAGATTTTGATTG CAAATCGTGGAGAAATCTCTATTAGAATTGCACGTGCTGGTACCGAAGCA GGAATCAGAACTGTTGCTGTATATTCGGAACAAGATGCCAAACAAATCCA TCGTCAGAAGGCTGATGAAGCATACTTGATTGGAAAAGGGATGCCACCTG TTGCTGCTTATTTGAATATCCCTGAAATCATAAAGATTGCAAAGGTATTT GAGGATTGATGGCTTTTACTAGTAGTTTTATTTTAAATTGAGTTTATTCA TATTTTTTGAAATAGAATAGAAGATAAAAACTGAGAGATATTGTAATGGT AATCTTAATCTCAACCTTCATAATTTTAGAAACACGATGTTGATGCTATT CATCCAGGTTATGGCTTCTTGTCAGAAAGACATGACTTTGCCAGAGCTTG CATTAAAAATGGTATTAAGTTTGTCGGACCAACTCCAGATGTCATTCACT TGATGGGGGATAAGATAGAAGCTCGAAAGACTGCAATTGCAAATAATGTT CCTGTAATTCCTGGAACAGAAAGCCCTGTCAAAAGTTTAGATGAGGTATA TAGTTGTTTAAATTTATACTGTTTATTTTATGATTTGTATGACTACAAAT TCTCACAGTACTTATCTTCTTTTTTGGGAGATTTGTTGGGAAATTGTATA ATATCATCAATTCTATTTAATGATATTAAAAATTTCTGTTCTAGGTCAAA GAATTTTGTGAGGAATTTGGATATCCAATTATGTTGAAAGCAGCTTATGG AGGTGGTGGCCGTGGAATGAGAGTTGTTAGCTGTGCTGAGGATCTGGAGA AAATGTATGATCTTGCAACTTCTGAAGCTTTGGCTGCTTTTGGAGATGGC TCAATGTTTATTGAACGATTCATTGGTGAGATCATTTTCGTACAATCTTT GATGTTCAGTTTTTCGTCAAAATTACCTTCAGACTCTTCTACATCACTTA GTATTGACATGATGGTATTGTTATGGTATGTCAACTGCTAACAGTGGTCT CGTGAAAAAGCGTTACTTTTATAGATGAAAAAAATTGTTTATTTCAAACA ATTGCTCTTTTTTTACTAGCCAACCCAAGACACATTGAAATTCAAGTCCT CGGTGACAAATACGGCAATGTTGTCCACTTATTTGAAAGAGATTGTTCAG TTCAGAGAAGACATCAAAAAGTCATTGAAATTGCACCAGCTGCAGACATG AGTGAGGAGACACGAAAAACATTACAAGATTGTGCTGTCAGATTATGTGA ATCTGTTGGTTATGAAAATGCTGGAACTGTTGAGTTCTTACTGGATGATC AAGGCAATCATTATTTCATCGAGGTCAACGCTCGTCTTCAAGTTGAACAC ACAGTTACTGAAGAAATCACTGGGTAAGTCACACTTAAAAATTTGATCTT TTATCAAGGGGAAATGATTGTTTCTTTTTTATAGTTATGAAATCCTCCTT ATTTTGGATTAATTCAAGACTTTATATTTGTTTCATTCACGAAATTTTCG TCTCAATGAAACGTTTTTATCTTATTTTACCAGAACTCGTATCTAATCGT AACTCTTAATCTCAATATATTTCATGTTTATTGGGAAAGTCCCTTGCTTT TAAAACTCTTGTGTAATTTCCCTTGATATTCGAAACACACACCTCGCATA TACCTCAGAAACAAAGTACATTATGTCAAGACATTTTGTAATCTGAGACA TTACTTCCTTTTAACTACATGATAATTATGATTATTTTGATTGTCTCTTT TATGCCTTCCGCTGAATTTGAATTATGAGACAGACTTTACAGTCCAAATT TGTCTTGATTTATCTTAGTTCGATTTTTTGTAAAATCTTTATATCCTCTA AAATCAACTCGGCAAAAAATTCAAAATTCGTATTAACGAAACTTGAACTT TATAGATTTTATAGATCTTATGTACAATTTATTTGTCATATAACCTTATC ATAGACACCCTATTTTGTAGACTTTCTTTATATAGACGGAGTGTTATTGA AGTTGTACTCCTTATTTTACGAAGTCTACAAATTATAATGATTTCAGTCA TATGTTAGTAATTTACCCATAAATAATTCTGCCATAGAATCGATTTGGTC CGTGCGCAGATCGGTATTGCCGAGGGCCAGTCTTTAGAAGAGCTTGGTTT AACACAAGACAAAATCAAATGTGATGGGTATGCTATTCAAGCTAGGATCA CCACCGAAGATCCTGCCAATAACTTCACACCTGATACTGGACGACTTGAG GTCTGTATCCACGCGTACACGTTTTTTCAAGCAGCCTCAATGTTTCTCAA GAAATCGGCCTTTTGAGTCTTAAGTGTTTCTTACATGTTTCTAAACTTTT TGACATAATCAGCCTCATAGAAGGCTGGATTGGAAGGTTCTTAAGTCATT CTGAGCCTCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAACGAAAAA CGTGTTGACCATTTCGCAATTATTGACTTCTTTATCGAAACTATAATAGA TGGGGAAAGTCCAAATTTCTTACCTTATATGGTAAGAATTGATATAAAAA GAAATGTATGATAACAAGTAACTTAAATAAAATAGTTTCTTGGATAGAGA CATTGAACAATAGGGGTATATTTCAATACTTCTGATACTTTAAGCTTCTT TTATTACCTACTAAATATCTACTTAATGTATTATACTTTTCATTGGACAG GTGTTCAGATCTGGTGAAGGCATGGGCATCCGCTTGGATGGTGCATCCAC ATACTCTGGTGCTGTGGTATCTCCACATTACGATTCTTTGTTGGTCAAAG TTATCTCACATGCCAAGGAACATTACGAAGCTGCTAATAAATTGGCTCGA TCGTTGAGAGAATTCAGAATTCGTGGTGTAAAGGTAAGGATTCATTATTT TGATATTCTAAGGTGAATATCAAATTTGGCAGGATATTAGCCGGGTAAAA TCTTTCCTTATGTGGATAAAATAAGTCTTCTTGGATTTTTTCTTGAAAAT TGTAACATTTCTAGCCTTCAATTGCATATGCTTCATAATACAACCATGAA GGTAATAAAGATATAGATGGAGAGAAAACGTCTCGGTAATGACCTAAATG GTCGTTGAAATCTAGCATAAATCTATTCAAAGCGGCTTTTCTTCGATGTA CCATCATTGGAAGCAAAAAAAATCCGAAATGTAAATTTATAAGAACAGAA AGAGGCTGGTCCGTTGATTTTGAAAAACTTAATTTTGCGAGAAATCTTAG TTAAAATGCGATTCGAAATAGTTTCAACTGATTTAAGGATAAAAGAATAT ATTAATTTCATAAGGATATATTTTTGGACTGGCATTTTGTAAACATTGAG AGTCGCGTCACATTATCATTGAAAGTTTCTTATTATAAAATCTTCACGTC TAAATGAGCAGCGGTTTTCATACTCTGACAAAATGATCGATACAAGGTTC CTAATTGTAACACGTAATTCTATCGATGGCCTTATGGGCAGCTTCCCTAG AAGTTTAGAGTATTGTGCTTATTATGTGAAGTTTTTTTCAATTTTTCATG ACAAGGCTATTATATTTCAATATACTTGTTAAAAATGGAATGTCTTTCCA TTCATCTTAAATATTCCCACGAGTTTACCCAAAATTAATCATCTTATTCC CAAAGCAACCAATCAGAATAGAACAAAAAGCATTGACTCTCCATCTATCT TTATTACCTTCATGATACAACAACCCTATTTTTCTCATGTAAAAAGCTGT AAATTGTAAACGAAGCCCGTAGTGCGTAAAGGCCCAGTGACTCAAAGAGT ATTGAATTGACAAAGCACTGCTTCTTCAAAAACGGACATAATAGCGCCAC AGACAGCGTCGTGCTAATTAAAGGGCCGATGCTGAGCCAATAAAGCTGTA ATATTNGAACATTATAAACGAAGCGCGTAAAGGCCCAGTGACTCAAATAT GCCACAGACAGCAATATGCTAATTAAAGGGCCGATGGTGAGCCAATAAAG CTGTAATATTTTTTTCGAAAGGCTTCAGAATTTCTTATAATTTATTTCAG ACCAACATTCCATTCGTTTTGAACGTCCTACAACATCCAGAATTTCTTCA TGGTTCAGTGGCTACAGATTTCATCTTCAAGAATCCTGCTCTCTTGGACA TCAAACCCACACAAAATCGCGCTCACAAATTATCATATTATCTTGCCAAC ACTATCGTTAACGGTCCATGTACACCATTAGCTACTGATATGCTCCCATC AAAGATTGAGCCTGTCCCTCCAAATGTAAGCCCTTTTCCTTTATTAGAAG ATCAAGAGTTTCTTAGCTTATAAGGGTTTGTTTGGCGATGATGTTATTAT ATATGTTAAAGGGAGGGAGGCGAATAGGGAGTTATCCGATTTCCATCTTT TACTTTATAACGCAATACCGATTATATTATAACGAGTAAAAATGGGAAAA ATCAAAATATAATAGCCGCATTCTTTTTCACCGTCCAATAGACTATATTA TAACGAGTAGATATCCTTAAAATTGAAAAAAGCCACTTGCCGCTTATGAT TTTATCCCGTGACCTTCGGGTTTTTTTTTGGTATGCAAACGGAAAACTTA GATGCTTGTTTATTTATTTAGTTGATAAAAAATGTTTTGCTTTCTGTTTA TAGCACAAAGACGGCCGACGTGGAGTTGTCAACAAGCCAACCGGATTCCG CGATATTCTACAGACCTTTGGACCGGAAGGTTTAGCAAAAGCTGTCAGAC GTGAAAACCGTCTCCTGTTAACAGACACTACTTTCCGTGATGCACATCAA TCGCTCTTAGCTACCCGCGTACGAACGCACGACCTGTTGAAGATTTCACC CTTTGTTGCACAGAAGTTTGCCAACCTCTTCAGTTTGGAATGTTGGGGAG GTAATCTATTGTCTTCATTCTGAAAGACTGACCATTGTTCTTGTCTTATT CTCTAAAATGAATAAACTCACGCCAAATACATAAAATTCAAGGGGGGGCT AAACCATTTTTGCTTGATTGGGGGCTGTGTTTTTCAAAAAATACTGGGGG GCTGAGTGTTGTGTAATAGAACTAGGGGCAGAGCTGATAGGTTGAAAACT CACGACAAAAATTTTATTTTTAGGAGCCACTTTCGATGTTTCAATGAGGT TCTTAAAAGAATGCCCCTGGGAGCGACTAGTACGTCTGCGAGAAGCCATT CCAAACATTCCCTTCCAAATGTTGTTACGTGGAGCCAACGCTGTCGGATA CAAGAATTATCCTGACAACGCCGTCTTTGAGTTTTGCCGATTGGCCAACA AGCATGGGTTGGATGTTTTCCGTGTTTTTGATGCTTTGAATTACTTGCCA AATCTCCAGGTAGATATACGGTGTATTCACTGTCAGATTCGTTGCACCCT GATAGAATCGATGGTCAACCTTAATACCCGATCATTGTCAAACGCTAAAT AAATTTTCATAGAACTAGTTTTTTATTTAAATTGTGCCAAAACAATTCTT ATATTGACCACGTGATGATAAAGGAATAATAAATTACATTTGGCAAATTT TCATGTCAATACCTAAATGATCTTTTTTTCCATTTAGCTTGGTATTGACG CTGCAGGGGAAGCAGGAGGTGTAGTTGAAGGAGCCATCTGTTACACTGGT GATTTGTGTTCACCCAATGAAACGAAGTATACGATAGATTATTATATGGA AATAGCTTCCGAACTTGTCAAGTCTGGAATTCATATCCTCTGTATCAAAG TAAGTCTTTCTCAGCATCACTTCGTTACGGGAGAGTTTATATATCTACTT TTAGAAGAGGGAGAAGTGACTGTAACTTTATTGATGATTCGGAACAACCC GCAGTTTTGACACGCAAATCTAAGGACGGTCTTATTGTCGCTCTCCGTTT TCAGGATCCAAGCAAATAACCTCCCCTCTGTAGAAAACAAAGCATCCTGC TCACAAGCATATCAGGTGCTCTTCCAAAAGCTTCGAAACCAACAGCTAAA TGTTTGTGTTGGTTATTTGTAAATATTTCGGCGCTGTAATTTTTTCTGTA AAATACAAACTCATCATTTTCTAACACACTCCGGGTGACCAGGTTATCAT GGTTAGGTGGAAAATTTTAAAAATCCATAATAATTTTGTTTTTATTTTAT ACTCTTTTGATATGTGAACTTAAAAATGCTTGTCTTTTTCAACCTCTTAG GACATGGCAGGTTTATTGAAACCTGATGCTGCTGCTCTCTTAGTGGGTTC ACTACGTGCACAATACCCCAAACTTCCCATTCATATTCACACGCACGACA CAGCTGGTGCTGGTGTTGCATCAATGTTGGCATGCGCTGAAGCTGGTGCT GATATTGTGGATTGTGCTGTCGATTCCATGTCTGGCATGACTTCTCAGCC GAGTATGGGTGCTATCGTCGCCAGTCTACAAAATACTGAATCTGATACCG GTAAGCTGTACTACTTTAAGATTAATTTTCACAAGATTCAATCTCGCAAG ACAAAAAATTCCTGAATATTTCTGGATTTAATTTCGCGAATCATCAGCAT TTTGACAAATTTACTTCTCAGCAACCCTGACACGATTTCGGGAGTTTCTC ATTCAACCGATGAAACAAAAATTTGTTTGGCTTAGGATTGACAACGGTTA ACTGAATGAATGTTTTGATTGTGCTCACTTTAATACATAGTTAAGCTTTT ATCCTTAATTATTTTTCACCCAATCAACACTTTTTTATTTCTTTTTTTTG GTATTTTCACTGTAACGAAAAAAAAATTCTTTGTTTCCAAACCCTTAGTT CCGGAGAGAGACTAAATATTTTGTCAGTGTTCTTTTTGTCATTTCCAGAA CTTCAATTGAGTGATATTGGCAAATACAATACGTACTGGGAGCAAACAAG AACACTGTATGCACCTTTTGAATGTACCACCAGTATGAAGTCTGGCAATT CTGATGTCTACCTCAATGAAATTCCTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020546XLOC_020546Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035220-exon-sc0001275-1575043694:21348..21478TCONS_00035220-exon-sc0001275-1575043694:21348..21478Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:21035..21203TCONS_00035220-exon-sc0001275-1575043694:21035..21203Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:20684..20899TCONS_00035220-exon-sc0001275-1575043694:20684..20899Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:20354..20534TCONS_00035220-exon-sc0001275-1575043694:20354..20534Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:19856..20159TCONS_00035220-exon-sc0001275-1575043694:19856..20159Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:18979..19141TCONS_00035220-exon-sc0001275-1575043694:18979..19141Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:18346..18528TCONS_00035220-exon-sc0001275-1575043694:18346..18528Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:16954..17178TCONS_00035220-exon-sc0001275-1575043694:16954..17178Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:16329..16575TCONS_00035220-exon-sc0001275-1575043694:16329..16575Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:15870..16105TCONS_00035220-exon-sc0001275-1575043694:15870..16105Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:15480..15641TCONS_00035220-exon-sc0001275-1575043694:15480..15641Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:14779..15028TCONS_00035220-exon-sc0001275-1575043694:14779..15028Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1575043694:14249..14380TCONS_00035220-exon-sc0001275-1575043694:14249..14380Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:21348..21478TCONS_00035220-exon-sc0001275-1510915933:21348..21478Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:21035..21203TCONS_00035220-exon-sc0001275-1510915933:21035..21203Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:20684..20899TCONS_00035220-exon-sc0001275-1510915933:20684..20899Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:20354..20534TCONS_00035220-exon-sc0001275-1510915933:20354..20534Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:19856..20159TCONS_00035220-exon-sc0001275-1510915933:19856..20159Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:18979..19141TCONS_00035220-exon-sc0001275-1510915933:18979..19141Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:18346..18528TCONS_00035220-exon-sc0001275-1510915933:18346..18528Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:16954..17178TCONS_00035220-exon-sc0001275-1510915933:16954..17178Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:16329..16575TCONS_00035220-exon-sc0001275-1510915933:16329..16575Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:15870..16105TCONS_00035220-exon-sc0001275-1510915933:15870..16105Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:15480..15641TCONS_00035220-exon-sc0001275-1510915933:15480..15641Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:14779..15028TCONS_00035220-exon-sc0001275-1510915933:14779..15028Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1510915933:14249..14380TCONS_00035220-exon-sc0001275-1510915933:14249..14380Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:21348..21478TCONS_00035220-exon-sc0001275-1491911889:21348..21478Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:21035..21203TCONS_00035220-exon-sc0001275-1491911889:21035..21203Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:20684..20899TCONS_00035220-exon-sc0001275-1491911889:20684..20899Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:20354..20534TCONS_00035220-exon-sc0001275-1491911889:20354..20534Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:19856..20159TCONS_00035220-exon-sc0001275-1491911889:19856..20159Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:18979..19141TCONS_00035220-exon-sc0001275-1491911889:18979..19141Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:18346..18528TCONS_00035220-exon-sc0001275-1491911889:18346..18528Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:16954..17178TCONS_00035220-exon-sc0001275-1491911889:16954..17178Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:16329..16575TCONS_00035220-exon-sc0001275-1491911889:16329..16575Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:15870..16105TCONS_00035220-exon-sc0001275-1491911889:15870..16105Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:15480..15641TCONS_00035220-exon-sc0001275-1491911889:15480..15641Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:14779..15028TCONS_00035220-exon-sc0001275-1491911889:14779..15028Clytia hemisphaericaexon
TCONS_00035220-exon-sc0001275-1491911889:14249..14380TCONS_00035220-exon-sc0001275-1491911889:14249..14380Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001275supercontigsc0001275:14249..21478 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.96643 6.45289 5.45104 5.42871 5.78844 2.7587 2.46784 4.50207 2.90001 6.26533 3.99557 2.57236 6.01887 5.66556 4.75431 11.272 3.72611 6.01009 0 0.549985 4.42087 5.27176 1.59653 6.91028 6.65148 4.62273 5.46544 0.659383 0.93348 0.0022912
Blast
BLAST of TCONS_00035220 vs. Swiss-Prot (Human)
Match: PYC (Pyruvate carboxylase, mitochondrial OS=Homo sapiens GN=PC PE=1 SV=2)

HSP 1 Score: 1121.3 bits (2899), Expect = 0.000e+0
Identity = 546/837 (65.23%), Postives = 667/837 (79.69%), Query Frame = 1
Query:   91 IKTMLRSQLGSLN-RIARAGTEAGIRTVAVYSEQDAKQIHRQKADEAYLIGKGMPPVAAYLNIPEIIKIAKKHDVDAIHPGYGFLSERHDFARACIKNGIKFVGPTPDVIHLMGDKIEARKTAIANNVPVIPGTESPVKSLDEVKEFCEEFGYPIMLKAAYGGGGRGMRVVSCAEDLEKMYDLATSEALAAFGDGSMFIERFIANPRHIEIQVLGDKYGNVVHLFERDCSVQRRHQKVIEIAPAADMSEETRKTLQDCAVRLCESVGYENAGTVEFLLDDQGNHYFIEVNARLQVEHTVTEEITGIDLVRAQIGIAEGQSLEELGLTQDKIKCDGYAIQARITTEDPANNFTPDTGRLEVFRSGEGMGIRLDGASTYSGAVVSPHYDSLLVKVISHAKEHYEAANKLARSLREFRIRGVKTNIPFVLNVLQHPEFLHGSVATDFIFKNPALLDIKPTQNRAHKLSYYLANTIVNGPCTPLATDMLPSKIEPVPPNHKDGRRGVVNKPTGFRDILQTFGPEGLAKAVRRENRLLLTDTTFRDAHQSLLATRVRTHDLLKISPFVAQKFANLFSLECWGGATFDVSMRFLKECPWERLVRLREAIPNIPFQMLLRGANAVGYKNYPDNAVFEFCRLANKHGLDVFRVFDALNYLPNLQLGIDXXXXXXXXXXXXICYTGDLCSPNETKYTIDYYMEIASELVKSGIHILCIKDMAGLLKPDAAALLVGSLRAQYPKLPIHIHTHDTAGAGVASMLACAEAGADIVDCAVDSMSGMTSQPSMGAIVASLQNTESDTELQLSDIGKYNTYWEQTRTLYAPFECTTSMKSGNSDVYLNEIPG 2598
            IK ++ +  G +  R+ RA TE GIRTVA+YSEQD  Q+HRQKADEAYLIG+G+ PV AYL+IP+IIK+AK+++VDA+HPGYGFLSER DFA+AC   G++F+GP+P+V+  MGDK+EAR  AIA  VPV+PGT++P+ SL E  EF   +G+PI+ KAAYGGGGRGMRVV   E+LE+ Y  A SEALAAFG+G++F+E+FI  PRHIE+Q+LGD+YGN++HL+ERDCS+QRRHQKV+EIAPAA +  + R  L   +V+L + VGYENAGTVEFL+D  G HYFIEVN+RLQVEHTVTEEIT +DLV AQI +AEG+SL +LGL Q+ I+ +G AIQ R+TTEDPA +F PDTGR+EVFRSGEGMGIRLD AS + GAV+SPHYDSLLVKVI+H K+H  AA K++R+L EFR+RGVKTNI F+ NVL + +FL G+V T FI +NP L  ++P QNRA KL +YL + +VNGP TP+     PS  +PV P    G       P GFRDIL   GPEG A+AVR    LLL DTTFRDAHQSLLATRVRTHDL KI+P+VA  F+ LFS+E WGGATFDV+MRFL ECPW RL  LRE IPNIPFQMLLRGANAVGY NYPDN VF+FC +A ++G+DVFRVFD+LNYLPN+ LG++AAG AGGVVE AI YTGD+  P+ TKY++ YYM +A ELV++G HILCIKDMAGLLKP A  +LV SLR ++P LP+HIHTHDT+GAGVA+MLACA+AGAD+VD A DSMSGMTSQPSMGA+VA  + T  DTE+ +  +  Y+ YWE  R LYA F+CT +MKSGNSDVY NEIPG
Sbjct:   37 IKKVMVANRGEIAIRVFRACTELGIRTVAIYSEQDTGQMHRQKADEAYLIGRGLAPVQAYLHIPDIIKVAKENNVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVVRKMGDKVEARAIAIAAGVPVVPGTDAPITSLHEAHEFSNTYGFPIIFKAAYGGGGRGMRVVHSYEELEENYTRAYSEALAAFGNGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRRHQKVVEIAPAAHLDPQLRTRLTSDSVKLAKQVGYENAGTVEFLVDRHGKHYFIEVNSRLQVEHTVTEEITDVDLVHAQIHVAEGRSLPDLGLRQENIRINGCAIQCRVTTEDPARSFQPDTGRIEVFRSGEGMGIRLDNASAFQGAVISPHYDSLLVKVIAHGKDHPTAATKMSRALAEFRVRGVKTNIAFLQNVLNNQQFLAGTVDTQFIDENPELFQLRPAQNRAQKLLHYLGHVMVNGPTTPIPVKASPSPTDPVVPAVPIG-----PPPAGFRDILLREGPEGFARAVRNHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRGTPLDTEVPMERVFDYSEYWEGARGLYAAFDCTATMKSGNSDVYENEIPG 868          
The following BLAST results are available for this feature:
BLAST of TCONS_00035220 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PYC0.000e+065.23Pyruvate carboxylase, mitochondrial OS=Homo sapien... [more]
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