|
Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035219 ID=TCONS_00035219|Name=TCONS_00035219|organism=Clytia hemisphaerica|type=transcript|length=4066bpRun BLAST on NCBI protein sequence of TCONS_00035219-protein >TCONS_00035219-protein ID=TCONS_00035219-protein|Name=TCONS_00035219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1192bp MLRSQLGSLNRYSSYCAYKTATKTPAYLQLCRYKSTTNVVEKSKINKILIRun BLAST on NCBI transcript from alignment at sc0001275:10658..21478- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00035219 ID=TCONS_00035219|Name=TCONS_00035219|organism=Clytia hemisphaerica|type=transcript|length=10821bp|location=Sequence derived from alignment at sc0001275:10658..21478- (Clytia hemisphaerica) Coding sequence (CDS) from alignment at sc0001275:10658..21478- >TCONS_00035219 ID=TCONS_00035219|Name=TCONS_00035219|organism=Clytia hemisphaerica|type=CDS|length=57264bp|location=Sequence derived from alignment at sc0001275:10658..21478- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00035219 vs. Swiss-Prot (Human)
Match: PYC (Pyruvate carboxylase, mitochondrial OS=Homo sapiens GN=PC PE=1 SV=2) HSP 1 Score: 1487.24 bits (3849), Expect = 0.000e+0 Identity = 720/1151 (62.55%), Postives = 899/1151 (78.11%), Query Frame = 1
Query: 217 VEKSKINKILIANRGEISIRIARAGTEAGIRTVAVYSEQDAKQIHRQKADEAYLIGKGMPPVAAYLNIPEIIKIAKKHDVDAIHPGYGFLSERHDFARACIKNGIKFVGPTPDVIHLMGDKIEARKTAIANNVPVIPGTESPVKSLDEVKEFCEEFGYPIMLKAAYGGGGRGMRVVSCAEDLEKMYDLATSEALAAFGDGSMFIERFIANPRHIEIQVLGDKYGNVVHLFERDCSVQRRHQKVIEIAPAADMSEETRKTLQDCAVRLCESVGYENAGTVEFLLDDQGNHYFIEVNARLQVEHTVTEEITGIDLVRAQIGIAEGQSLEELGLTQDKIKCDGYAIQARITTEDPANNFTPDTGRLEVFRSGEGMGIRLDGASTYSGAVVSPHYDSLLVKVISHAKEHYEAANKLARSLREFRIRGVKTNIPFVLNVLQHPEFLHGSVATDFIFKNPALLDIKPTQNRAHKLSYYLANTIVNGPCTPLATDMLPSKIEPVPPNHKDGRRGVVNKPTGFRDILQTFGPEGLAKAVRRENRLLLTDTTFRDAHQSLLATRVRTHDLLKISPFVAQKFANLFSLECWGGATFDVSMRFLKECPWERLVRLREAIPNIPFQMLLRGANAVGYKNYPDNAVFEFCRLANKHGLDVFRVFDALNYLPNLQLGIDXXXXXXXXXXXXICYTGDLCSPNETKYTIDYYMEIASELVKSGIHILCIKDMAGLLKPDAAALLVGSLRAQYPKLPIHIHTHDTAGAGVASMLACAEAGADIVDCAVDSMSGMTSQPSMGAIVASLQNTESDTELQLSDIGKYNTYWEQTRTLYAPFECTTSMKSGNSDVYLNEIPGGQYTNLQFQAFSLGLNEQFDEVKQKYIEANNLLGNIVKVTPTSKIVGDLAQFMTQNKLSEADVINRAEDLDFPNSVVEFFEGQIGQPYGGFPEPLRTKVLKGRPSLDERAGKTMEPVDFEALRKELTDDHGYEVDECDVMSYCMYPDVFLDYAQFKEEFGPVTGLPTRAFFVGPDVGEEFEIELEQGKTLHMKIIAVGDVTKEGNREVFCEVNGQMRTFHIEDKSETENIVRNPKAEKGVKGSVGAPMPGKVVNLRVKEGEHVKKGDSVIVLSAMKMETNVSAPIDGTVQSIAVTQGMQVDASDLLITI 3669
+E I K+++ANRGEI+IR+ RA TE GIRTVA+YSEQD Q+HRQKADEAYLIG+G+ PV AYL+IP+IIK+AK+++VDA+HPGYGFLSER DFA+AC G++F+GP+P+V+ MGDK+EAR AIA VPV+PGT++P+ SL E EF +G+PI+ KAAYGGGGRGMRVV E+LE+ Y A SEALAAFG+G++F+E+FI PRHIE+Q+LGD+YGN++HL+ERDCS+QRRHQKV+EIAPAA + + R L +V+L + VGYENAGTVEFL+D G HYFIEVN+RLQVEHTVTEEIT +DLV AQI +AEG+SL +LGL Q+ I+ +G AIQ R+TTEDPA +F PDTGR+EVFRSGEGMGIRLD AS + GAV+SPHYDSLLVKVI+H K+H AA K++R+L EFR+RGVKTNI F+ NVL + +FL G+V T FI +NP L ++P QNRA KL +YL + +VNGP TP+ PS +PV P G P GFRDIL GPEG A+AVR LLL DTTFRDAHQSLLATRVRTHDL KI+P+VA F+ LFS+E WGGATFDV+MRFL ECPW RL LRE IPNIPFQMLLRGANAVGY NYPDN VF+FC +A ++G+DVFRVFD+LNYLPN+ LG++AAG AGGVVE AI YTGD+ P+ TKY++ YYM +A ELV++G HILCIKDMAGLLKP A +LV SLR ++P LP+HIHTHDT+GAGVA+MLACA+AGAD+VD A DSMSGMTSQPSMGA+VA + T DTE+ + + Y+ YWE R LYA F+CT +MKSGNSDVY NEIPGGQYTNL FQA S+GL +F EVK+ Y+EAN +LG+++KVTP+SKIVGDLAQFM QN LS A+ +AE+L FP SVVEF +G IG P+GGFPEP R+KVLK P ++ R G ++ P+D +AL KEL D HG EV DV+S MYPDVF + F FGP+ L TR F GP + EEFE+ELE+GKTLH+K +AV D+ + G R+VF E+NGQ+R+ ++D + + +PKA K VKG +GAPMPGKV++++V G V KG + VLSAMKMET V++P++GTV+ + VT+ M ++ DL++ I
Sbjct: 32 LEYKPIKKVMVANRGEIAIRVFRACTELGIRTVAIYSEQDTGQMHRQKADEAYLIGRGLAPVQAYLHIPDIIKVAKENNVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVVRKMGDKVEARAIAIAAGVPVVPGTDAPITSLHEAHEFSNTYGFPIIFKAAYGGGGRGMRVVHSYEELEENYTRAYSEALAAFGNGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRRHQKVVEIAPAAHLDPQLRTRLTSDSVKLAKQVGYENAGTVEFLVDRHGKHYFIEVNSRLQVEHTVTEEITDVDLVHAQIHVAEGRSLPDLGLRQENIRINGCAIQCRVTTEDPARSFQPDTGRIEVFRSGEGMGIRLDNASAFQGAVISPHYDSLLVKVIAHGKDHPTAATKMSRALAEFRVRGVKTNIAFLQNVLNNQQFLAGTVDTQFIDENPELFQLRPAQNRAQKLLHYLGHVMVNGPTTPIPVKASPSPTDPVVPAVPIG-----PPPAGFRDILLREGPEGFARAVRNHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRGTPLDTEVPMERVFDYSEYWEGARGLYAAFDCTATMKSGNSDVYENEIPGGQYTNLHFQAHSMGLGSKFKEVKKAYVEANQMLGDLIKVTPSSKIVGDLAQFMVQNGLSRAEAEAQAEELSFPRSVVEFLQGYIGVPHGGFPEPFRSKVLKDLPRVEGRPGASLPPLDLQALEKELVDRHGEEVTPEDVLSAAMYPDVFAHFKDFTATFGPLDSLNTRLFLQGPKIAEEFEVELERGKTLHIKALAVSDLNRAGQRQVFFELNGQLRSILVKDTQAMKEMHFHPKALKDVKGQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEI 1177 The following BLAST results are available for this feature:
BLAST of TCONS_00035219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|
Copyright © 2026, MARIMBA.