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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035200 ID=TCONS_00035200|Name=TCONS_00035200|organism=Clytia hemisphaerica|type=transcript|length=1645bp
GGCCTGATGCTTGGATAGTTGACCTCCTTCAAATTCCTCTAGCTTTGAGT
CAAGGTTAAATTTGTTTCTTACCTGGTTTTGGatgttttctttgcttagt
tTGACTTCTTTGTTGGTCTTTTCGATTGGGTGTAGTTGTTTTGACGGTAT
GGGAGGCTCCCCCTCCCTCGAcctaaaaaagaatttcttctgTTGTAATT
TTGCCCTCTCTGAGGTTTGTCATAGCTTTTTGTAGTTGATGATTTAGCAT
ATTTATTGCTTATTTTATTTGTGAGATTCAACTCTTTGACTAGTACCCAA
ACAGTTTTGAAGTTATTGGCTGTGACTATGCACAAAAGTCCTTGTATTGA
GGATTGATATTGCCACGAATGAAGATTCTGCGTTTCAGTGAAATTTCGTG
GGAGGCATGGCCCAAAATAGCAGCCATGTCCACAGTTTTCTGTGCCAGAG
ATTGAACAGATACGTTACCATTTTTAACTTCTTCTAAGATTTTTAGATTT
ACATTCAGGGCTTTTTTCAGTGATTTCTGTATGGTAACTAGTTTAACATC
TGACATCTTTGGGCACTATTCAAGATTTTCCAGAGTTCCCCATTTACTTT
CGGGGGGTCAAGGGTACAGTTTTCTGGGCAAGGGtatgttttgaaaatct
ttttcatgtTCTCAAAAGGCTTCTCACTGTCCCAGTTTGTCTTAATTAAC
TGAGCCAATTTTTCGTCAACAGGGCTCGATCTTTCTTCCTCAGTTGACAC
AGAGGCAAGCTTTTCGACATCTAATTCAAGTTCTGGCTCTTTTAGTTCCC
CATTGTTTTGCTGTTCCTTATCTACTAAAACTACAGGGTTCTGATTCTCA
TTTTCGTTGAGTGACTCATAGCCATCTGTTTGGCTAGCCCTTGCATTGAA
TGTTTCCTCTGGCTCTGATAAGTCAATCTCGTTAAAAGGAGCTGGGTTGT
CCGAGTCTGTCTCCCAGCCGATGTTATGATTTATGCTATGATTTTGCTGC
ACTGGGCTAGTATGTATCGATCTTACTGGGATGCACTTCCTTTTTGCATG
CACTGATGCAGGTTGTTCCTCTTCTCCCCCGGATTTACGTTTTCAGctat
gttttttcttctttttcttaggGTGTTTATGTTTGGTTCTTCTTGTTGAG
GGTGATGATGATGAGGATTCCTCACCATCATCATCTGATTTCGACCGCAA
ACTGTTTGATCTTTCTTGTTGTTTATCCTTCATATCCTTTATTTTGGATT
GAATATCTTTCAAACGTTTATTTAATTCCGATAGAGATTTCTCAGAATta
ggcatttttaaatttttcctggaaaaatcaAGCAGCTTGCAGTGTATTTA
TGACAgaaaatataataaataaaGAGTAGAAAGAAAGTACTTATCTTTTG
TTTGACAACTTTGTCTTTGATGTTTCTTTAAACAATCTTGAAAACCTCTC
AagtttaaaaagaaatatttcaaaattttcttttcctccGCCATGTTGAC
TGCATGAGCGCCACGTCATGAACTGACTGTTCTGCTCCGCGTTCTCTTCt
ttgaataatagaaaaaatcaaacagaAAGCGTGGCTAAAACAGGAGATAT
TTGGGGTTTTctctgaaattttattgttttttggactgttttgat Run BLAST on NCBI transcript from alignment at sc0001271:69103..70747 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035200 ID=TCONS_00035200|Name=TCONS_00035200|organism=Clytia hemisphaerica|type=transcript|length=1645bp|location=Sequence derived from alignment at sc0001271:69103..70747 (Clytia hemisphaerica)
atcaaaacagtccaaaaaacaataaaatttcagagAAAACCCCAAATATC
TCCTGTTTTAGCCACGCTTtctgtttgattttttctattattcaaaGAAG
AGAACGCGGAGCAGAACAGTCAGTTCATGACGTGGCGCTCATGCAGTCAA
CATGGCggaggaaaagaaaattttgaaatatttctttttaaactTGAGAG
GTTTTCAAGATTGTTTAAAGAAACATCAAAGACAAAGTTGTCAAACAAAA
GATAAGTACTTTCTTTCTACTCtttatttattatattttcTGTCATAAAT
ACACTGCAAGCTGCTtgatttttccaggaaaaatttaaaaatgcctaATT
CTGAGAAATCTCTATCGGAATTAAATAAACGTTTGAAAGATATTCAATCC
AAAATAAAGGATATGAAGGATAAACAACAAGAAAGATCAAACAGTTTGCG
GTCGAAATCAGATGATGATGGTGAGGAATCCTCATCATCATCACCCTCAA
CAAGAAGAACCAAACATAAACACcctaagaaaaagaagaaaaaacatagC
TGAAAACGTAAATCCGGGGGAGAAGAGGAACAACCTGCATCAGTGCATGC
AAAAAGGAAGTGCATCCCAGTAAGATCGATACATACTAGCCCAGTGCAGC
AAAATCATAGCATAAATCATAACATCGGCTGGGAGACAGACTCGGACAAC
CCAGCTCCTTTTAACGAGATTGACTTATCAGAGCCAGAGGAAACATTCAA
TGCAAGGGCTAGCCAAACAGATGGCTATGAGTCACTCAACGAAAATGAGA
ATCAGAACCCTGTAGTTTTAGTAGATAAGGAACAGCAAAACAATGGGGAA
CTAAAAGAGCCAGAACTTGAATTAGATGTCGAAAAGCTTGCCTCTGTGTC
AACTGAGGAAGAAAGATCGAGCCCTGTTGACGAAAAATTGGCTCAGTTAA
TTAAGACAAACTGGGACAGTGAGAAGCCTTTTGAGAacatgaaaaagatt
ttcaaaacataCCCTTGCCCAGAAAACTGTACCCTTGACCCCCCGAAAGT
AAATGGGGAACTCTGGAAAATCTTGAATAGTGCCCAAAGATGTCAGATGT
TAAACTAGTTACCATACAGAAATCACTGAAAAAAGCCCTGAATGTAAATC
TAAAAATCTTAGAAGAAGTTAAAAATGGTAACGTATCTGTTCAATCTCTG
GCACAGAAAACTGTGGACATGGCTGCTATTTTGGGCCATGCCTCCCACGA
AATTTCACTGAAACGCAGAATCTTCATTCGTGGCAATATCAATCCTCAAT
ACAAGGACTTTTGTGCATAGTCACAGCCAATAACTTCAAAACTGTTTGGG
TACTAGTCAAAGAGTTGAATCTCACAAATAAAATAAGCAATAAATATGCT
AAATCATCAACTACAAAAAGCTATGACAAACCTCAGAGAGGGCAAAATTA
CAAcagaagaaattcttttttaggTCGAGGGAGGGGGAGCCTCCCATACC
GTCAAAACAACTACACCCAATCGAAAAGACCAACAAAGAAGTCAaactaa
gcaaagaaaacatCCAAAACCAGGTAAGAAACAAATTTAACCTTGACTCA
AAGCTAGAGGAATTTGAAGGAGGTCAACTATCCAAGCATCAGGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035200-exon-sc0001271-1491911889:69103..70747 | TCONS_00035200-exon-sc0001271-1491911889:69103..70747 | Clytia hemisphaerica | exon |
| TCONS_00035200-exon-sc0001271-1510915933:69103..70747 | TCONS_00035200-exon-sc0001271-1510915933:69103..70747 | Clytia hemisphaerica | exon |
| TCONS_00035200-exon-sc0001271-1575043694:69103..70747 | TCONS_00035200-exon-sc0001271-1575043694:69103..70747 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001271 | supercontig | sc0001271:69103..70747 . |
Blast
The following BLAST results are available for this feature:
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