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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035186 ID=TCONS_00035186|Name=TCONS_00035186|organism=Clytia hemisphaerica|type=transcript|length=843bp
NAAGGCGTTAGTAAACCCCCGGAAACGCGTTTCCGggaaaagggcaaaaa
agtaaagaaaacgtAATATCTTATgacaaaatgtattttttaacctagtt
tttcagccttttaactgtttttgtaAAACAATCCATAATTTATATCACAT
AACCAGtgtaatcatcaaaaacGTCCAAAATCCTTGCATTTTGTCCTATT
TCGTGTTGCGCCAAACTAACAAAAATCATGTAATTGGCTTGCGCAAAGTC
CATCTTGACCCTTTATTCACCAAATATTGCGTATATTTCATTTCAGTTCA
CTCAATAAAATATTATCATGCATTTTCAATCAAATGGAGTCAGTTTCTGA
CTATCAATTAGGGTTTTTTTATGTTGTCATGTCGGTCAAGGTGCGAGGTC
TGCGCGACCGGACCGGGCAACCGGACCGGATGCTCATACCAGATTTCAAC
CCTCGCCAAGCCATATAAGTACACCATTTATTGTAATGTGGACGTCTAAT
TGATGGTTCAATGGAATTTTCTGGTTACTCCAATTAACTAGTGGTTCATA
GTATATCACAAAATAGTTTGAATGTCAAGAGGAGCTGCAGAAATCCTTCC
AGAAAATCACATAACGACAAATGGTTTTGTACCGGATAGCCAACCTCTTC
AGGATATTAACAACACAAAAGCTTGTCCAAATACATCCAAGAACTCTTCA
ACATCAAATTACAATAAGAATAATCCATCAGCAATGTCATATCATGCAAA
TAAAATGGCTTTACACCAACAAAATACAGTTGCAAAGTCACAGAACTTGC
TTCCATTTTGTTTACACTTTTGCTCGCTTGTCATGGAACTAAA Run BLAST on NCBI transcript from alignment at sc0001271:8453..9443- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035186 ID=TCONS_00035186|Name=TCONS_00035186|organism=Clytia hemisphaerica|type=transcript|length=991bp|location=Sequence derived from alignment at sc0001271:8453..9443- (Clytia hemisphaerica)
NAAGGCGTTAGTAAACCCCCGGAAACGCGTTTCCGGGAAAAGGGCAAAAA
AGTAAAGAAAACGTAATATCTTATGACAAAATGTATTTTTTAACCTAGTT
TTTCAGCCTTTTAACTGTTTTTGTAAAACAATCCATAATTTATATCACAT
AACCAGTGTAATCATCAAAAACATCCAAAATCCTTGCATTTTGTCCTATT
TCGTGTTGCGCCAAACTAACAAAAATCATGTAATTGGCTTGCGCAAAGTC
CATTTTGACTCTTTATTCACCAAATCNNNNNNNNNNNNNNNNNNNNNTAA
CCAGTGTAATCATCAAAAACGTCCAAAATCCTTGCATTTTGTCCTATTTC
GTGTTGCGCCAAACTAACAAAAATCATGTAATTGGCTTGCGCAAAGTCCA
TCTTGACCCTTTATTCACCAAATATTGCGTATATTTCATTTCAGTTCACT
CAATAAAATATTATCATGCATTTTCAATCAAATGGAGTCAGTTTCTGACT
ATCAATTAGGGTTTTTTTATGTTGTCATGTCGGTCAAGGTGCGAGGTCTG
CGCGACCGGACCGGGCAACCGGACCGGATGCTCATACCAGATTTCAACCC
TCGCCAAGCCATATAAGTACACCATTTATTGTAATGTGGACGTCTAATTG
ATGGTTCAATGGAATTTTCTGGTTACTCCAATTAACTAGTGGTTCATAGT
ATATCACAAAATAGTTTGAATGTCAAGAGGAGCTGCAGAAATCCTTCCAG
AAAATCACATAACGACAAATGGTTTTGTACCGGATAGCCAACCTCTTCAG
GATATTAACAACACAAAAGCTTGTCCAAATACATCCAAGAACTCTTCAAC
ATCAAATTACAATAAGAATAATCCATCAGCAATGTCATATCATGCAAATA
AAATGGCTTTACACCAACAAAATACAGTTGCAAAGTCACAGAACTTGCTT
CCATTTTGTTTACACTTTTGCTCGCTTGTCATGGAACTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035186-exon-sc0001271-1575043694:9272..9443 | TCONS_00035186-exon-sc0001271-1575043694:9272..9443 | Clytia hemisphaerica | exon |
| TCONS_00035186-exon-sc0001271-1575043694:8453..9123 | TCONS_00035186-exon-sc0001271-1575043694:8453..9123 | Clytia hemisphaerica | exon |
| TCONS_00035186-exon-sc0001271-1510915933:9272..9443 | TCONS_00035186-exon-sc0001271-1510915933:9272..9443 | Clytia hemisphaerica | exon |
| TCONS_00035186-exon-sc0001271-1510915933:8453..9123 | TCONS_00035186-exon-sc0001271-1510915933:8453..9123 | Clytia hemisphaerica | exon |
| TCONS_00035186-exon-sc0001271-1491911889:9272..9443 | TCONS_00035186-exon-sc0001271-1491911889:9272..9443 | Clytia hemisphaerica | exon |
| TCONS_00035186-exon-sc0001271-1491911889:8453..9123 | TCONS_00035186-exon-sc0001271-1491911889:8453..9123 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001271 | supercontig | sc0001271:8453..9443 - |
Blast
The following BLAST results are available for this feature:
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