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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035183 ID=TCONS_00035183|Name=TCONS_00035183|organism=Clytia hemisphaerica|type=transcript|length=618bp
TACGATTTAGCTGGTGAGGAACTTAAGATGTCACTTAAACTataagattt
tgtttttgttcctttttaggAGTTACAAATCCTTTTGTCTGCACAAGTGA
AACCAACTGGTTAACCGAGCTATCACTTGGAACTTTGACGTAAAGAAATT
ATTAAACGGTTGAACAAGACAATATTTTGGCTGGTGATAAATAAAGATTC
GGATGCCAGCGACTCTAATATAAGCATAATGATCAAATGATTGATAAATA
TATACTGtattgtgtcacagacccggtggtaCTTCTACATACTGTAAAAA
TCAGCAATTTGTACCCGCTTAGAGAAAAACCCTGACTTTTCACCCACCCG
GTAATCTATAATGAAGGTTTATCTCTGAAGCTGTAAcccaccttttttat
aagaaccaacgTTTTTttagccttaggatgttcttaaccttttttttctt
ttaaaagcctaagaatatttttattttcatctcttagtgggtattttatt
cattttctgaGAAATTGAAATACATTTTAACAAaagaagccttatgttct
tataaagaaaacatgTGGAATTACACAATCGTTTAAGACAAGCGATCTTT
CATTCCCATCGTAATTTG Run BLAST on NCBI transcript from alignment at sc0001271:3698..4919+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035183 ID=TCONS_00035183|Name=TCONS_00035183|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at sc0001271:3698..4919+ (Clytia hemisphaerica)
TACGATTTAGCTGGTGAGGAACTTAAGATGTCACTTAAACTataagattt
tgtttttgttcctttttaggAGTTACAAATCCTTTTGTCTGCACAAGTGA
AACCAACTGGTTAACCGAGGtaagaataaatattttatcttCGATTACTT
ACATGTAATAACTATATTGAGAAATGTACAATTTTCGATTGTTTTTCATA
AGGCAAAAGGATCTAATATGGTTAACACtttgtttcacttttcaaagata
tttaacCATGTGAACACTTGAGCTGATTTGTAACTCTCGAATAGCGCTCT
gcaacgcatacgtcataattattactttttttacatttgtacgagttgta
ATGCGgttcaattaaagatacgtgcaagttcttatatatcttttgtcaaa
tgatgcaattaatGTGCAAAAGAAACGCGAAAGGATTGGagctcgtacaa
acacatcaagaagagtaatgattatgtcaaaagtgTGCGCTATATAAACC
TTGAAAGATGCTTACCCTATTTCCCATTCAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCCCATTCAAGCTACCAAATTGACAGAATTTTGGAACTCcttct
gaaaattttattttgtctttcagCTATCACTTGGAACTTTGACGTAAAGA
AATTATTAAACGGTTGAACAAGACAATATTTTGGCTGGTGATAAATAAAG
ATTCGGATGCCAGCGACTCTAATATAAGCATAATGATCAAATGATTGATA
AATATATACTGtattgtgtcacagacccggtggtaCTTCTACATACTGTA
AAAATCAGCAATTTGTACCCGCTTAGAGAAAAACCCTGACTTTTCACCCA
CCCGGTAATCTATAATGAAGGTTTATCTCTGAAGCTGTAAcccacctttt
ttataagaaccaacgTTTTTttagccttaggatgttcttaaccttttttt
tcttttaaaagcctaagaatatttttattttcatctcttagtgggtattt
tattcattttctgaGAAATTGAAATACATTTTAACAAaagaagccttatg
ttcttataaagaaaacatgTGGAATTACACAATCGTTTAAGACAAGCGAT
CTTTCATTCCCATCGTAATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035183-exon-sc0001271-1491911889:3698..3816 | TCONS_00035183-exon-sc0001271-1491911889:3698..3816 | Clytia hemisphaerica | exon |
| TCONS_00035183-exon-sc0001271-1510915933:3698..3816 | TCONS_00035183-exon-sc0001271-1510915933:3698..3816 | Clytia hemisphaerica | exon |
| TCONS_00035183-exon-sc0001271-1575043694:3698..3816 | TCONS_00035183-exon-sc0001271-1575043694:3698..3816 | Clytia hemisphaerica | exon |
| TCONS_00035183-exon-sc0001271-1491911889:4421..4919 | TCONS_00035183-exon-sc0001271-1491911889:4421..4919 | Clytia hemisphaerica | exon |
| TCONS_00035183-exon-sc0001271-1510915933:4421..4919 | TCONS_00035183-exon-sc0001271-1510915933:4421..4919 | Clytia hemisphaerica | exon |
| TCONS_00035183-exon-sc0001271-1575043694:4421..4919 | TCONS_00035183-exon-sc0001271-1575043694:4421..4919 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001271 | supercontig | sc0001271:3698..4919 + |
Blast
The following BLAST results are available for this feature:
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