TCONS_00035162 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035162
Unique NameTCONS_00035162
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2883

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035162 ID=TCONS_00035162|Name=TCONS_00035162|organism=Clytia hemisphaerica|type=transcript|length=2883bp
GATCTCATCTTTCATTCAAAACTTTAAAGAACGCTAATAGTGAAAGTGGA
GCTACAAATGGTACTCAAAGAcgtgtatattttcaatttcttatCACCAA
TGACTTACACCAAGTCGAGATACAATCAGAGACGTTTTGAATGTTTTCga
ACTCGTCGATAAAGAATTCCAATGGAAAGCCTTGATCAGAAAGTATCAAC
GCGTTCACCATACATTGATTTAAAATCACTATCATATTGACCAAAGCGCA
CCTGATGCTTTCAACGAATGACAGTCTTCAATTACACTTAACATCCGCTA
TCCTGCGTTAAAGAAATGTTTGGGAAACGTTTCGAAACAGAATTTTAGTT
GCGTCCAAAGAAATACCAGTACCCGGGATGATATTCTCAATGGGATGAAT
TTGGTGACCATGGAAAAAGTTGTTGCAACGGTTTGCGAAAGACAACCTGA
CCAAGAATACACTGATAGTCAAAGAGAAAAGAAGATTATCCTTAACTATC
TCTTGCTGAGCAGTTCAGGGGAACGCGAAGACGGACCAGTCCGAAATATT
CCGAAAAAGAGATAACGAGTCTGGTAGATTGACCGAAAGATTCTAATGTC
AGACGAAACGAACTAAAAGCGTCGCAGCGCCCTCTGCCAATCATCTGTGT
ATATTTTGAGTAAATGAATATCTACGCTCATGGTATCATACATGAAGTTT
AGAGCTTGATGATTATATACGGCTGACGGTATTCATCAGGGTGATTCAAA
ATCGATAAGCTGTATATAACCCAAAGCAATCGTCAAGCTGCCATGTGGGA
TGCTCTTCCTCGATCTTGGAATGATCTCTAACAGGATACGAATTTGTGGC
ATGAGAATCCCTTCAACAACCTGGTTTTGATTGGTGGATAAAATTTGTGA
TAATGATGGAATTGTTTTGACATAGATATGTATAGATTTGATGGATGTTG
TCTTCTCCGTAGATGCAGTTACTTGCTTGGTGATTGTTGCGAACCATAGG
TGCATTTATAAGAGTATTCAATGCAATCGTTGAAGTATGATATGCTGATG
GATGGATTATCTAGAAGTGATTTCTTTGGTTGAATATAGCAGTGTATTCA
TCGATTTGAAAGATGACCTCTTTTAGCCCAGTCATCAACCGTGGCCAATG
ATGCTTGATCTATCTAGATCGTCATTTGAAGAGCGATTGTTAAATGAAGT
TGTCTCGATATCAATTCTGTAATATTGGTTACCAAATCTTGCCAATTAAA
TCTTTTGTCCTTTATGCCTATCGATTCAGCTATTTTGATGGGTTAACTTA
TTAGAGTTCGAAATGAATAGTTTACCTTTTCCTTCTAACCAATGATTTGT
GTAGAATTTAAACACCCCAAACAAGCCTACATTTTGACTCACTAGGATTT
TGTTGTGGTTTCAGTGTTTTTCCCAAGCTTTCAATCCTTATTTGTGTGAA
AGAAGACATATTTTCAAAGAACTGTAATCATTTATCacaaataatgtttt
gattaaGTGTAAATAATTATTAGTGGCCTGAAAGGGACTTTTCTTAAAAT
CGaactttttttggacttttcacTGGCATGAAATTCGAGTTTCATTTTGT
GATAGTATAACTAAATTCTTAACTAAGTTCTTCTCTGTCAGAATTGATTT
TTATCAGCGTCTTACAGCTAATGAGAATTTAGTAATGGGCCATTTCGttt
atatccatacatgggattggacgaacatttccagggagGTCTCCAAAAAC
AATTCCAGGGGGGGTGCAAGGTTCCTTTACGCACTTTTTTCAGGGAGTTG
TTTTTTCCAAGGGGTTGGGTGACTAAGCATCTATATTTCCTTTGGGCATG
AATAATGGGCTCGTCAAAGTTTTGGAATTTCCGGGAACCTAATTTGATTT
TCCAGGAGGggatttaaagttattttaaaacTTCCAAGTGGTAAAAGATT
GATTTCAGGTCGTCCTCTCTCAATGTACATATGGTGTAGAAGGATTTTTC
GATGGACAATAGAATCctttttttctagatttttgcaaattttgccatta
tTTCAGGAAATATATGTACAATTTCATTAATTCTTTTGGCTTGAAAAGAT
TCGTCATGTGGTTCCTGTATGGATATCAAATGGATAGCTCAATGGtctat
ttttctttgatttcgttCATTTTCTCAGTCTGGTAAAGCCCTTTCGTTAG
GAGTTAGGAAATCTAGCAATCTATTTATTTTTGTCAACAAGGCACTCTAT
CCTATCTGCCAATGAGAGGTGAAAGAGCTGCTCTGATTACGAAGCTATAT
TGATACTTGTGACATTTTAGATGGGCTGGGTACAAGGGAAGGGAAATTGC
AGAAGTGTCACTCACCATTTCCTCGATGGTTAATATTTTTACAGActatt
attttttagctttCGTTTTTGCTCTTCATCTAGTAGCCGTTTAGACCTCA
ATATTCCATTTTGGCCAAATACCCTTGACAGacaaaactcgaaaaattat
tttcttcgaAATTCTGTATATGAATTTCCTGGTCAAGAAAGGTTTTTGGG
GTGGAAGTTCTGTCTGTTAAGGGAGTGCAACGAACGTTACTTAGCTGAAT
AGTTCGGACGGTATTTTGGGAATTTTCTTCGTGAATCTTCCTCCGCAATC
TTAAGGTTCAGAAACTTTAAGGAAGTGttggtttttgatgattttgtgat
GAGACCGGGGAAAGGATGTACATATTGAATACAAATCCATTGGATGGAAC
TTTCACCAACGTTTGAACTTTCTCTGTGACCATTTACTTTATGCACAGGT
GTTTATTTCCTTCATCAAACTTCATTATCGCTCAAAAGGTATTACCTAAA
AGTTAGCTCTCCCCATTATCGCAAAAAAAGCGT
Run BLAST on NCBI

transcript from alignment at sc0001265:37340..56050-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035162 ID=TCONS_00035162|Name=TCONS_00035162|organism=Clytia hemisphaerica|type=transcript|length=18711bp|location=Sequence derived from alignment at sc0001265:37340..56050- (Clytia hemisphaerica)
GATCTCATCTTTCATTCAAAACTTTAAAGAACGCTAATAGTGAAAGTGGA
GCTACAAATGGTACTCAAAGACGTGTATATTTTCAATTTCTTATCACCAA
TGACTTACACCAAGTCGAGATACAATCAGAGACGTTTTGAATGTTTTCGA
GTAAGTTTTTTTTGTTAAAACCAGTACCAGTGTTTTTGTAAGTAGGCCAA
CAAGGTGCTGCATATTTCTTGTACGTAGATTTGACAAGCGTCGAGTGGCT
TTTTTCTGACTATTTTGAAATAAAGCATGACCAGACCTATTTCTTGGCAT
GCCGAGGTAATATTACACTCCTCCTCACCCTATAACGAATTTGTTAGGGT
TGAAATTATTCCTCTCGTCTCAGGGATCTTTTAATATATAATTCAGAGAG
ATAATTGCTCCGGCCTGCTCCGGCCTAGGAGCCTTAAATTCTCTCTCGTC
AGCCGCCGCCGACGACGGTCAAGACATTTTTGTTTGTTTATCTAATCCGA
TGATCTATTCCGATTTAATAAAAACGGATTATCTGATTCGTAGAATACTG
TGATTTGATTGGCTGAAAGTATTTAAGAAAAAGATGGCTGCCGAAAGTGG
ACTAGCTGAATGTGTAGCAAATTACTGGCAAATCTCAGTGAAAAATTGAT
CATTTTCATCATTATTCATGATGTTTTGGACATGATTTATGAGAAGTTTG
ATGCATACTGGTTCTCTAACAATGTGGAAAGACTTTGGAGAAATTTTGCC
CATGAACCGTCAGCTGATCGAGTGCTTAAATCTTGCATATGGCTATCTTC
TCTTCTAGACGCACAAAACCATAAACCTTGGAACTTGACAATGATAACTT
TCAAACGCACAGCCATTGGAATTCAAAAGAGAATACTAAAATTACAACAT
TACCGTGCAAATTTGAAAACAATCTGAGTAGTTTTTGTGGTGTTATGTAC
ATGGCTGAAAACGATCCTGTTTTGTATATATTCATCATTGTTGACACTGG
CGACCGTTCCTTTTGATTTTTCAAACCCGACACAGATTTTTTACAAACAT
ATCACTATGAGAATTCAGTAAAGGATACTGAAACACAATTCCTGTATAAT
TTTGAACAAGATTGGAGAAATTTTCACAATGTTATGGCTGAAAATGATAT
TTTTTGGACTTTGTCGTAATTTCATCGCGGCTGGCGACCCTTCCTTTTGA
TTTTTCAAACCCAACAAGATTTTTTACAAACATATCACTATGAGAATTCA
GTAAAGGATACTAAAACACAATTCCTGTGTAAATTTGAACAAGATCGGAG
AAATTTTTTAGTGTTATAACTGAAAATGATATTTTTGGACTGTCGTAATT
TCATTGGCTGGGGCGACCGTTCCTTTTGAAGATTTTTCAAACCCAAAACA
GGTTTTTTCCAAATATACCACTATTTATTACATACACACTATTGTACCAT
TTTATTTGGTTTATCCTACTCTCCTCCAAGTATTATCCCAATAGAAAAAA
TAATGCTTAGCTAAACGCCATTGCCTCTAATTTAGGACAATCAAAGTAAC
GGCGCATCATGACTTTGCTAATTGGCAAGCTTAGAAAAAAATAAATTTAT
AAGAACTTGGAAATATTGACTTCTAAATGTTTATCTCCTTTAGCTCCTTT
TTTGAACTTTTTAGTCAAGGATAATATTGGGCGAGGGGTGGGGTTGGTTC
TTTAGGCAAGAAAGTGCATGTGTTGTCACTTAGAAGAGCTAAACTTCCAG
CTGGTTTATTTATTCGTTAAGATTATTTCTCATACTCGCTCTGCAATATA
ATTATTACTTTGATTTCTGATTTGTTCTGATTAGTAGTTTGTGGGCAACG
TTCTAACACAAGTAACTCAACAAACTCACCTTTCACATCTTTTAATCTCT
TAAGCCGGAGCTTCCAGCGCAGCTGGTTTATTACAGCTTTAGGATGAAAA
GATTTTGAAAAAGTTGCCTCTGAAACGAGACAGAGATTGATTCACAGTGT
CCTTTTTTATTCCAGACTCGTCGATAAAGAATTCCAATGGAAAGCCTTGA
TCAGAAAGTATCAACGCGTTCACCATACATTGATTTAAAATCACTATCAT
ATTGACCAAAGCGCACCTGATGCTTTCAACGAATGACAGTCTTCAATTAC
ACTTAACATCCGCTATCCTGCGTTAAAGAAATGTTTGGGAAACGTTTCGA
AACAGAATTTTAGTTGCGTCCAAAGAAATACCAGGTAAATAAAATGGTTA
TAGACACCCCCTTCTCACAAACTTTTTCAGCCAGTGGGGGGTAAAATTAA
TGGACTGAAACTTGAAGGGGACTGATATTCCTTAGTCTACACAATAGACA
GATCCAGGCTTTTAGGCCTTACTCTTGGTCTATAGGCACTGCTATAGGCG
GCCACTAGTGACCCCCCACCGGGAATTGCTTATTAATAGGTTTAAACATA
ATAGACAACATTCACAAAAGATGTTTATCAATAGAGATTTTAAATAAAAG
AATGTTTAAAAACACAGCTGATAGGCTTAGGTCTCGAAACTCTCTATTGT
TTCATTAAAACCTCAGTGCGCATGCAATTTATCTGGAGAATTTCAATATT
CAAAACGAGAGCAGTGCTCATAGCCCGAAGAGTAGGAGTTTTACGCTCGA
AACGTAATATGACGTAGCCTAGATATTCCTATGTTTTTTATGGAATTTGA
ATTACATTATTTTCAAGCCATAAAATTTAGTCGGGATTGAAAAAAATAGC
ATAATATTTTGTAGTGAGAATTTACTTATCTGATTATTTCCAACGGGAAA
AAAATTAAGAGTACAATTTTGCACTGGGGACGATATTTTAGCCAATTTTT
CCGCAGTGAAGAAGGGAGAACTGTTTGTTGATACGACTAGATTTTTTTAC
GTGTGTTGCTTTAAGAGCCATTTTCTTAGGGATATGGACAACGTCAGGAA
GAAATTCCCTCAGAATTGCTTCATTTTCAAATATTTTGTTCAAAACCCAT
GATTGATGCAACCTGTCAAAATTTTGAATGTTTGAAAATTCATACCAGAT
ACCTTATCGGGGAAAACTTCATCGGGGAAAATTTCCGTCGGGGAAAATTT
TCGTCGGGGAAAAATATTCGTCACTTGCTGGTAGTTGGTAAATGCATTAA
GGCCGGGGAAAATTTTCGTCGGGGAAAAATATTCGTCACTTGGCCAATAT
TTCGTCACTTTTCCCCGACGAAGTTTTCCCCGATAAGGTAGTTGGAATTC
GGTTTAAGACTTTCTTTTTTGGACCTGCCTTAAGGTAGTCCTTTAAATTA
GCCCTTGTCCGTTCGTCCGTCCGTTCGTTCGTCTGTTGCCAGCTTTTCTC
GGGATCGGCTCATTAGTTTTTTCTAATTTTTTGCACAATGATGGAAAATG
CCAATGCCCAAAATGTGACGGAGCCTGATGTAAATTGGTTGTTACTCACC
ATTCACAATAGTTGGACATCAACCAACAGGATCACTTCTTTATTTAATTA
TTCGACTAGAAGAACAATGTTAACAGATTNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGTCTCTCAATGATTTAC
TGTCTGTTATACAAACAGTCGGAAATGTTGATTGTTCTGAATCATAAATC
TCACAGAGTAGTGCTTTAATTAATGCTGCATGTTCTACTGCTTCCTGTAG
CGCAAGAGTCTCGGCAGCAAGTGGAGTTTTCACAACACGTTTTACTTTCT
TTGAAGTCCAGACAATTGGCGCAGAGTTTCCATTTTCACCTTTATATTAA
TTAGGATGATGAAACCTCCTTGAGACTTAAATCCTGGAAGATTGGCGTGT
GATGCGTCACTATAAGCATACAACGTTGACTTTTTAACATCACCAATATT
AGGTAAGTGGATCTGAGCAGTTGAATTTTGAAGCTTCCGAAGATACTTGT
TCGCTAACCGTATGTCAGCTGCTGTACCATCTTTAACACGATTACACAAA
TCACACGACGCAAAAGCTAAATCAGGGCGTGTTTGTTTTGACACCCATTG
TATTTGTCCAATTAAAGCTTTCAGTTGTAACTTTTCATCTTGAGTAAGAT
TACGTTTTGATGTATCTTTCAATTCAATAGGTTGAAGTGTGTTAATGTAG
TTATTTTGATGCATTGCTACAAACTCTCCTGTCTGGTTGATGTCCAATCC
TAGGTACTGGAAAGTTGAAAACGATTCTTTGCTTAAATCAAATGATTTCT
GTACATGTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNGGCATGGACTTACTCGTAGAACACTTCCTCCGTGACGCACAACAA
CAACTTTTCCGTCAATTCCGATAATGGTACCTGGACCATGCCAGTCCTTG
TCTGAATATCGTTTGTAATAGACTGTATCTCCATTATTAAACTCTTTGCT
CGTTGTTGTTCGTGTTTGACGTGATAATGCTGTTTTGATTCTTTTACTGG
ATTCAGCTTGGATAAATGCCCTTCTAGCAGAGTGAAGAGCATTCAAATGT
CCAGCAACAAATTCACTTGACGTTTTCGTTCGAAGGGCTGGTAACTGAGA
TGTTAACGTGGACGGAAGATTTGGGTTACGGCCGAAGACTAGTTGATTAG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAGCAAAGATTGATTGTGGTGAACCGAAAATAGCAACCCAGTGTTTCAA
GATTTCGTCAACTATCACCTCCTTGTGTTTAGATTTGATGACGGACGCCG
CAGAGAAGCGAGTAAACAAATCGATCATATGAAAAATAATGTACTTGTGA
TGTAATTAATTGTGATGAACTTTAAATCCATTGCAAGGCAACCATTAAAT
TCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCCATGTAAATTGGTTGTTACTCACCAT
TCACAATAGTTGGACATCAACCAACAGGATCACTTCTTTATTTAATTATT
CGACTAGAAGAACAATGTTAACACCTGATTTTCGAAATAAAATATTTCCG
ATCGCTTAGGACCGGAAATGTCCCGGGAAAGGCGGTTTTTTGGGATTTTC
TCGAGATTTTTTCATTAGTTTTTTCTGATTTTTTGTACATAGAGGCGCGT
TAGTACTGCCGAAAAGATGTTGAAACCCGTTTTTCGAAAAAAAAAATTTT
CGGCCTGTGGAACCGGAAATGTGCCGGAAATCGCCGTTTTTTCGTATTTC
CGTGACACTTTCTCAACTTATTTGACCGTTTTTCACAGAAAAATGTTCGC
TATGGTGATACCCAAAACTTTGCATCATTTAATTTTCAATAAAATCATTT
GTTCAATCCGGAACTCTTTAAAAATCGCTGGAACAGCCGAAAACCGGCGT
AAAACAGATATCTTCATTTTTTCGAGCCATACTTGACAGATTTTCATGAT
TTTTTGCACAATGCAAAATGGCAATACCGAAAATGTGAAGGAGCCCGATT
TTCGAAATAAAATATTTCCGGTCGCTTGGGCCGGAAATGTCCCGGAAAAG
GCGTTTTTTTGGGATTTTCTCGAGATTTTATCGTTAGTTTTTTCAGATTT
TTTGCTCAAAGATGCTAATTAACAATGCCCAAACATGGCCAAGTCCGATT
TTTGAGAACATTTTTTTTCCGGCCGAAAATGTCGGAAATATGCCGGAAAT
CGCCGTTTTTCTGGATTTTCATTAGGCTTTTTCCTTATAATTGTTTTTTT
TTCCATCCAAAAACATTATTAATAGCAATGCCCACTATCAAACATGTTTT
AATTTTCAATAAAATTGATTTTTGAAGCCGGAACTATTGACTGACTGATT
TTTTTTCATTTTTCTTCTCGCATTGCTATCTAACGATCATCAGGTAGGTC
TATTCAGTATGTTGCTTGTTCTTTTTGATAGAATATGGAACTACTGTTTG
ATACTTTGTGAAAATATGAGNGCATGTTGCTTGTTCTTTTTGATAGAATA
TGGAACTACTATTTGATACTTGGTGAAAATATCCTGATAACCATGGGCTG
AAATCAAAAAAACAAAAATATAGCTTATTTTAAAGGTCATTTTCTTGCAA
GGCTCTCACTACGACATGTTGGTTTTTGGATTTTTGTGTAGTCTTTAGTG
GATATGTTTTTAGTAGTCTTTAGTGGATATGTTTTTAGTAGTGAAGAAGT
GGGTTATGATGGCGGCTTAAAAATGACCTTTAGTGTAAAATCTCCATTCT
TCCCCAGTCCATTTCAGCCAAAGTCCTCAGTTGTGAGGTGTTTATTAGGT
TGTTTGGACTCTCCGGACATACATTTTGACAGTCGAAAAACTCCAAATAT
TTCCATGTGGTCTAGCCTCGTTAGAGCTGTAGAAGGTCGAGAAAATAGGC
TTTTTTTAGCTTGTGTTTTGTGTTGNGTTAGACCTGTAGAAGGCCGAGAA
AATAGGCTTTTTTTAGCTTGTGTTTTGCGTAGTCGATTGCCCGTAGCAAC
GGTAAACAATTACATAGCGACAGATATTACAAACCACCGTACGAAATTGT
ACTGATTTTTTGAATGGCCACCCTGTGATTTGTGTTGTTTACTATGTCTG
TGTTTTTCATGTAACTAAAGTAACGATTTGCAAATTTACGAATCATTTAC
ATCTGTTCCTATTTTATTTTGATTATAGTACCCGGGATGATATTCTCAAT
GGGATGAATTTGGTGACCATGGAAAAAGTTGTTGCAACGGTTTGCGAAAG
ACAACCTGACCAAGAATACACTGATAGTCAAAGAGAAAAGAAGATTATCC
TTAACTATCTCTTGCTGAGCAGGTGAGATGAGTTTCTGCTTCAATTGATG
GGTACACTCATCATAATATTTGAAAATTTGTTATTTTGATAAAATGTACA
TTATTTGGTCCTAAATTGCATTTTACTAAAAAATATACCACAACAAGCTA
ATTAGAGAGGGTGCTGAGAAAATTGACTTGAAACGCAACCGTTCCTCAAT
TTCATATTATAAACAATTTGTAAGTTAAGGATTTTTTTAGCTTCGATTAA
GATTTTAAAACACAGAGACGAAGATAGATCATCATTAATGACGAAGACAA
TAGCGTCATCCTTCCAGCTGCGGATTTCTTATACTATTTGGTATCTTTGT
AACCCTTAGATTAATAGATTCTTGAGGTTTGACCAATGAAGTAAAAGCCC
GAAAGGCTAGAAGTGAATCTCCTACGTAGGATTTGAAGCCACTAAAGCCT
ACATAAGCTGCGCGGCCTCGTGCGCACTTTTTCTTGCCTCGGAAAGGTTA
ATGATTCGCTTCTAGCTCTTCGGGCTTTGACTTTATTGGGTGTGACATTT
TTGTGCTCTATATTCAATGCAATCATTATTCCGAAATTCATATTTTTCTA
GTTCAGGGGAACGCGAAGACGGACCAGTCCGAAATATTCCGAAAAAGAGA
TAACGAGTCTGGTAGATTGACCGAAAGATTCTAATGGTGAGCTTCGTGTA
TTGCTTTAGAAGATTAGTTTTTTTTGTGAGATGTTATTACTCGTTGATCC
AGAGAAATGGAAAGGAATTGAAAAGCGCTTCTCGAAAACAATGGAAACAC
GGCTCGTCATATACCAAGTCCTTTGCCCTTAAGGGAGTTCGTTTCGAGTT
AATGGATTTCTTTTGTTATCGCTGTAAAAACTTTGTATATTTAGCGTAAT
GTGACGAAATTCGTTTGTTTCGATTCAAATTATGCGAGAACTTTAGGGGC
TTATAGTTTGGGGACACCTTTTATACCAGAAGGAACCTTTATTTTTTTGC
TCAGAATATTCTAGCGATGCCAATGATATAACGGCATCACGGCGGCATAA
TTTGATAAAAAGATGAAGTGCGAGAAAAAAAGAAATTAAATCTGTTCTTA
ATGAATTTCTTGCAACTTTTCTTGAAGTAACTTGATATCATCGTGATGAG
AATTTTTCAGACTACAAGTTACATAGTGTAAAATTTGTTACTGGATACTG
AAAGTTCAAGGGTAATGAAATAAAACAAGAAGCCGTATCGGCGTGAAGGC
CCAGTTGACGTGGCAATAACTGAATGTTCATTCGTACCGAGTACCGGTAA
TGTTGGCGGGACTAATTTCTGCGTTTTGGGCTTTGCGAAAAGTACCAAAT
TTATGCTCTCGAACCGCAATGGTAAATGAAAGCGAGTTAATGATGAATGT
GACCAGAAGAGTATTTTAATAAAACAAAAAAAGCTATGCTATTGCATGCC
TACATTATGTGCAAAATAAATTCATTTTATATTTTTGATACTACCGTCAA
AGTGCAAAAATTTTGCAAAGAAAAAAAAAGAGTGTAAAAATTACTGGCGC
TTTTCCGTAATCATTCTGCTATTTTCCCCGGGTATACTAGCAATCATATT
GCTAGTAATGGCCCAGAAAAAAGCGAGACGCTTCTGAATGACCATCCAAC
TTTCTAAATTTCCTTCTTTGGCTATCCAAAAAGTTTTTATCTTTTTCCGT
TTTCAAGTGGAAAGTGGAAAGTGGAAAGTGGAATTATAGTCCAGGAACCG
GAATCTTATGCACTTTGACGGTAATATGAAAGAAAAAATTGGTTAATAAA
TTCAAACTTGCCATGTCACTGACCTTCAAAATGATCAATAAAGGATCATC
ATTTTCACACGCTACAATCATGAAAAATGTTTCAATCTTATTCAATTTAA
CACATAAGCTGCATTTTAGTATCCATTAATAAAGTCCTGAATCAGTTTAC
AGGCTTTGTCATTTGAAAATTCCAGGCGTGTGGTCAATCGCACTCCTANA
AATTCCTGAATCAGTTTACTTAGAAAAATTCTGTGTCGAGCTTGAAAAAT
CCAGTCACCCAACGTTAAATGTAACAGATCTAGAAATGACCATTTTCATG
CTTAGCATCATTAAAAATATTTCGATCTTATTCGAATTTACATATATGCT
GCATTTTAGTATCCATTAACAATCAGTTTACATGGAAAAATTCTGTGTCA
AGTTTGAAAAATCCAGCAACCGGCCATTAAATGCGACAGATCCAGAAACG
CAGAAAGGACCATTTTCATGCATAGCACCATGAAAAATATTCCGATCTTT
ATCAAGTTTACACATGAGCTGCATTGTAGTATCCATTAACAAATTCCAGA
ATCAGTTTACTTGGAAAAATTCGGTGTCAAGTTTGAAAAATCCAGCCAGC
GGCCGTTAAATATGACTATGACAGATCCAAAAAAGACCATTTTCACGGCA
CAGCACCATTAAGAATATTTCGATCTTATTCAAATTTACCCATGAGCTGC
ATTGTAGTATCCAATAACAAATTCCAGAATTAGTTTACTTGGAAAAATTC
CGTGTCAAGTTTGAAAAATCTAGCCAGCAGTCGTGCCGTCAAATACGACA
GATCCAGAAATAACCATTTTCACGCATAGCACCATGAAAAATATTCTGAT
CTTTTTCAAATTTACACATGAGCTGCATTGTAGTATCCATTAACAAATTC
CAGAATCAGTTTACTAGGAAGAATTATGTGTCAAGTTTGAAAAATCCAGC
CACCGGCCGTTAAAATACGAGGAGACAGCATGCAGACTGGCAGATCCAGA
AATGACCATTTTTCATGCATAGCACCATGAAAAATCTTCCGATCTTATTC
AAATTTACACATAAGCTGCATTTTAGTATCCATTAATAAAGTCCTGAATC
AGTTTACCTAGAAAAATTCTGTGTCGAGCTTGAAAAATCCAGTCACCCAA
CGTTAAATGTAACAGATCTAGAAATGACCATTTTCATGCTTAGCATCATT
AAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAACTTTTCGACCAGTTGCTTTTTAAAGGCCCACTTG
CGCTGCGCGGCTGGGCCAATAAAAAATACCGATCCACTTTTATAAACATA
TAGAAACCAACACTCTTCGCATGACGAGCCGTTTTTTTCTGGACCCTTTC
TAATTACCTAATTAAAGCCAAAACAAAGGAGTTCTCAATGGGAACGGTCA
GAACACTTTGGGTAATCAGAAGCGCTTTTTCTGTTCCTTTCCATTTCTCT
GGTTGATATTTCACTCACGAGATCCAAGCTACCATAGTTGTCAAAGATTG
AATCAAACATATCCCGATACAATTTATGTAATTCCAAGCCTATTCCTTTA
GTGTGTTCAAAGAACCTTTTAAAATCGATGTCTTAATGGACTGTTATTTT
TATTCACTTAGTGGTCAAATAGCCATGTTTGGACTTTTTTCCTGGACTTG
AATCAGAAAATACTGACATGTACTAAACCTTTGCAGAAAAGACAGTACTG
TTCGTTACGGTAAAATTTAGCGGTTAGCTGAAAACCTTGGTCATTCCCTT
TTCATTCGATGCTGTCGCGACCTTTTTAGCGGCAACGGATCCTTCAATCT
TATTAGATGTATGCACCTTACCCAATTCCTATGTCATTCTTTCTTTTCCA
GTCAGACGAAACGAACTAAAAGCGTCGCAGCGCCCTCTGCCAATCATCTG
TGTATATTTTGAGTAAATGAATATCTACGCTCATGGTATCATACATGAAG
TTTAGAGCTTGATGATTATATACGGCTGACGGTATTCATCAGGTAAATAA
CTTTGTGATCATATTAGATTTCAACAATAACCTACTAACACGTGGTTACT
GGAGAGTGATCGAATTGAAACAACGTTGTCCCCACGAACCAGTGTAGACT
TGATAGCCCAGTCGGCAGCGCTGTTGAACTACTAATGCGAAAGTCGTGAA
ATCCCACCCTTTTTGACAAACATCTAAATGCGAGATTCAAGGCAAATTTA
TTTCTCTTCTTTAAAAGGATTCTAGGTACCTTACATAGGCTGTATTTTTG
AAAATGGCAAAAGATATTGAAGAATAAAATGAAGACTTTCTTAAAATACC
TGAAGGCTCAAAAGTTTTCTTTCTAAATCACCAAATCTTTCTTTTGATAC
AGGGTGATTCAAAATCGATAAGCTGTATATAACCCAAAGCAATCGTCAAG
CTGCCATGTGGGATGCTCTTCCTCGATCTTGGAATGATCTCTAACAGGTT
AGATTTGGGTTTATTTGTCTATGGAGCTGCGATTATACAGACTCTTACCA
AGAGCAGCTACTGGCAGAATTTTTTGAAATATCTGTTCTTTTCATCCAGG
AGAGTAAATTTTATGGATAAATCTAGGAGAGACTTTCCTCAAAACACCCA
GGTAAAATCCAGGGGTCGCCTTAAAGACATCTGTTCTTAAAATCCAGGAG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATCTAATAGTATGATACTAATGATGTTAGAA
GTAAAGAGAAAATAAGCAATATTATTATAGTCGAAGGCTTTAACAATAAC
CTTAATCAAACGGCCGTTACGAAATCCTGTAATTCTCGTTTTATTGGATT
CTAAAGCCACGATGCTTGTTCAATTTCCACTCTCGATTTTCTCAATCAGA
TCTTCTATTGTGAATGATAGTAGAATCGAATCCCACATTGATTTGGTAAA
TTGTTAATTTGAGTTTAATAACGAGTCGTTCAAATTTTTATATTCTCTAT
CCTTTATTCCAGGATACGAATTTGTGGCATGAGAATCCCTTCAACAACCT
GGTTTTGATTGGTGGATAAAATTTGTGATAATGATGGAATTGTTTTGACA
TAGATATGTATAGATTTGATGGATGTTGTCTTCTCCGTAGATGCAGTTAC
TTGCTTGGTGATTGTTGCGAACCATAGGTGCATTTATAAGAGTATTCAAT
GCAATCGTTGAAGTATGATATGCTGATGGATGGATTATCTAGAAGTGATT
TCTTTGGTTGAATATAGCAGTGTATTCATCGATTTGAAAGATGACCTCTT
TTAGCCCAGTCATCAACCGTGGCCAATGATGCTTGATCTATCTAGATCGT
CATTTGAAGAGCGATTGTTAAATGAAGTTGTCTCGATATCAATTCTGTAA
TATTGGTTACCAAATCTTGCCAATTAAATCTTTTGTCCTTTATGCCTATC
GATTCAGCTATTTTGATGGGTTAACTTATTAGAGTTCGAAATGAATAGTT
TACCTTTTCCTTCTAACCAATGATTTGTGTAGAATTTAAACACCCCAAAC
AAGCCTACATTTTGACTCACTAGGATTTTGTTGTGGTTTCAGTGTTTTTC
CCAAGCTTTCAATCCTTATTTGTGTGAAAGAAGACATATTTTCAAAGAAC
TGTAATCATTTATCACAAATAATGTTTTGATTAAGTGTAAATAATTATTA
GTGGCCTGAAAGGGACTTTTCTTAAAATCGAACTTTTTTTGGACTTTTCA
CTGGCATGAAATTCGAGTTTCATTTTGTGATAGTATAACTAAATTCTTAA
CTAAGTTCTTCTCTGTCAGAATTGATTTTTATCAGCGTCTTACAGCTAAT
GAGAATTTAGTAATGGGCCATTTCGTTTATATCCATACATGGGATTGGAC
GAACATTTCCAGGGAGGTCTCCAAAAACAATTCCAGGGGGGGTGCAAGGT
TCCTTTACGCACTTTTTTCAGGGAGTTGTTTTTTCCAAGGGGTTGGGTGA
CTAAGCATCTATATTTCCTTTGGGCATGAATAATGGGCTCGTCAAAGTTT
TGGAATTTCCGGGAACCTAATTTGATTTTCCAGGAGGGGATTTAAAGTTA
TTTTAAAACTTCCAAGTGGTAAAAGATTGATTTCAGGTCGTCCTCTCTCA
ATGTACATATGGTGTAGAAGGATTTTTCGATGGACAATAGAATCCTTTTT
TTCTAGATTTTTGCAAATTTTGCCATTATTTCAGGAAATATATGTACAAT
TTCATTAATTCTTTTGGCTTGAAAAGATTCGTCATGTGGTTCCTGTATGG
ATATCAAATGGATAGCTCAATGGTCTATTTTTCTTTGATTTCGTTCATTT
TCTCAGTCTGGTAAAGCCCTTTCGTTAGGAGTTAGGAAATCTAGCAATCT
ATTTATTTTTGTCAACAAGGCACTCTATCCTATCTGCCAATGAGAGGTGA
AAGAGCTGCTCTGATTACGAAGCTATATTGATACTTGTGACATTTTAGAT
GGGCTGGGTACAAGGGAAGGGAAATTGCAGAAGTGTCACTCACCATTTCC
TCGATGGTTAATATTTTTACAGACTATTATTTTTTAGCTTTCGTTTTTGC
TCTTCATCTAGTAGCCGTTTAGACCTCAATATTCCATTTTGGCCAAATAC
CCTTGACAGACAAAACTCGAAAAATTATTTTCTTCGAAATTCTGTATATG
AATTTCCTGGTCAAGAAAGGTTTTTGGGGTGGAAGTTCTGTCTGTTAAGG
GAGTGCAACGAACGTTACTTAGCTGAATAGTTCGGACGGTATTTTGGGAA
TTTTCTTCGTGAATCTTCCTCCGCAATCTTAAGGTTCAGAAACTTTAAGG
AAGTGTTGGTTTTTGATGATTTTGTGATGAGACCGGGGAAAGGATGTACA
TATTGAATACAAATCCATTGGATGGAACTTTCACCAACGTTTGAACTTTC
TCTGTGACCATTTACTTTATGCACAGGTGTTTATTTCCTTCATCAAACTT
CATTATCGCTCAAAAGGTATTACCTAAAAGTTAGCTCTCCCCATTATCGC
AAAAAAAGCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020506XLOC_020506Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035162-exon-sc0001265-1575043694:55901..56050TCONS_00035162-exon-sc0001265-1575043694:55901..56050Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1575043694:53817..54035TCONS_00035162-exon-sc0001265-1575043694:53817..54035Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1575043694:45479..45622TCONS_00035162-exon-sc0001265-1575043694:45479..45622Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1575043694:44815..44899TCONS_00035162-exon-sc0001265-1575043694:44815..44899Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1575043694:40509..40649TCONS_00035162-exon-sc0001265-1575043694:40509..40649Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1575043694:40054..40148TCONS_00035162-exon-sc0001265-1575043694:40054..40148Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1575043694:37340..39388TCONS_00035162-exon-sc0001265-1575043694:37340..39388Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1510915933:55901..56050TCONS_00035162-exon-sc0001265-1510915933:55901..56050Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1510915933:53817..54035TCONS_00035162-exon-sc0001265-1510915933:53817..54035Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1510915933:45479..45622TCONS_00035162-exon-sc0001265-1510915933:45479..45622Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1510915933:44815..44899TCONS_00035162-exon-sc0001265-1510915933:44815..44899Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1510915933:40509..40649TCONS_00035162-exon-sc0001265-1510915933:40509..40649Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1510915933:40054..40148TCONS_00035162-exon-sc0001265-1510915933:40054..40148Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1510915933:37340..39388TCONS_00035162-exon-sc0001265-1510915933:37340..39388Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1491911889:55901..56050TCONS_00035162-exon-sc0001265-1491911889:55901..56050Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1491911889:53817..54035TCONS_00035162-exon-sc0001265-1491911889:53817..54035Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1491911889:45479..45622TCONS_00035162-exon-sc0001265-1491911889:45479..45622Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1491911889:44815..44899TCONS_00035162-exon-sc0001265-1491911889:44815..44899Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1491911889:40509..40649TCONS_00035162-exon-sc0001265-1491911889:40509..40649Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1491911889:40054..40148TCONS_00035162-exon-sc0001265-1491911889:40054..40148Clytia hemisphaericaexon
TCONS_00035162-exon-sc0001265-1491911889:37340..39388TCONS_00035162-exon-sc0001265-1491911889:37340..39388Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001265supercontigsc0001265:37340..56050 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.29766	5.51119	1.91138	0.985972	5.02331	4.41473	3.52301	4.11213	3.18875	3.53155	6.90217	3.25701	3.16439	4.31078	3.4943	5.17606	3.0292	4.93512	2.33304	2.49084	3.88774	4.93655	6.0406	6.59973	3.64939	4.39637	3.75547	2.25256	4.77076	6.22246
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035162 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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