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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035161 ID=TCONS_00035161|Name=TCONS_00035161|organism=Clytia hemisphaerica|type=transcript|length=669bp
TTAACGCCTTTTAAAATTCCCCTGAAAACTACGAGGACATAATTGTGAAA
GTGTAGTTCAAAACCCAGAACTTTGATTTTAACcgtatcatttttaattg
gaGTTTCGAAAAATTTCGTATGAATNaaggaaataaatttttgtgaagtt
ACAGTAAATGGTCACGCGATAGAATTAGTACTGCTTTCTCTTCCGACATC
TCATAAGATAGGTCACTTCCCTGTTGAATAAGAGAAAGTTCGAATCTTGG
TGAAAATTCCAGACGATGGGTTCGTAAGTCAAATAGTGCCGTGTGCCTGA
CCCCGCTATCTCTGAgacgaaatcatcaaaaaacgATCCTTTTATCTAAA
AGTCTTTGAATCGGAAGATTTCCGAGGTTGGAGGTCGAATAATTTCTTGA
AATACTTAAACAAGCTATTCGGCAATTTATGCGATCCATGAAGTCATTTT
GACATCAGAAAAATAATGTTGAAAGTTGTCAGATTTTTTTCGCtgtcaaa
atgacgtcattgatcTCATGAAAAGTAACGTTTGTTGTGCTAATTTGGTC
AGGAATGGAATATCAAAAGTTAAACGGCTACAGTGATGAAAAGTAAAGAC
GAGGGTCTAAAAATAATGACTTGCGAAATTTACATATTCAAGTATTAGTT
AATCGGGAAAATGGTGATG Run BLAST on NCBI transcript from alignment at sc0001265:34545..35680- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035161 ID=TCONS_00035161|Name=TCONS_00035161|organism=Clytia hemisphaerica|type=transcript|length=1136bp|location=Sequence derived from alignment at sc0001265:34545..35680- (Clytia hemisphaerica)
TTAACGCCTTTTAAAATTCCCCTGAAAACTACGAGGACATAATTGTGAAA
GTGTAGTTCAAAACCCAGAACTTTGATTTTAACCGTATCATTTTTAATTG
GAGTTTCGAAAAATTTCGTATGAATNAAGGAAATAAATTTTTGTGAAGTT
ACAGTAAATGGTCACGCGATAGAATTAGTACTGCTTTCTCTTCCGACATC
TCATAAGATAGGTCACTTCCCTGTTGAATAAGAGAAAGTTCGAATCTTGG
TGAAAATTCCAGACGATGGGTTCGTAAGTCAAATAGTGCCGTGTGCCTGA
CCCCGCTATCTCTGAGACGAAATCATCAAAAAACGATCCTTTTATCTAAA
AGTCTTTGAATCGGAAGATTTCCGAGGTTGGAGGTCGAATAATTTCTTGA
AATACTTAAACAAGCTATTCGGCAATTTATGCGATCCATGAAGTCATTTT
GACATCAGAAAAATAATGTTGAAAGTTGTCAGATTTTTTTCGCTGTCAAA
ATGACGTCATTGATCTCATGAAAAGTAACGTTTGTTGTGCTAATTTGGTC
AGGAATGGAATATCAAAAGTTAAACGGCTACAGTGATGAAAAGTAAAGAC
GAGGGTCTAAAAATAATGACTTGCGAAATTTACATATTCAAGTATTAGTT
CATCGTGAAAATGGCGGTGGCATTTCTGCTTTTCCTTTCCTTTGTCTCAG
TCTAAGAATGTTCACTAGTGAAAGGCTTCGTTTTCGGAGAGCTCGAGTTG
CCTCTCAGGCGGATAGGATAGAGTACCTTTATATTTTTTTAAATATTTTT
TTTTGTATTTTTTTGTCCTAATTTTCTCGGAAAATATAACAACATGCCTT
GTACTTTTTGCATCTCTCTTGTCTATGCATTGACTATGTTGCATTAAGGT
CCGTGGATATATCTATGAGTTTACCTGTTGATTTCGACGTATGGTTGAGT
GAACATTTGTTACGATACCAGTAATTTGTTGTTGGATTAGTGACTTCGTT
TGATTGCTGCTAGAATTAAGTTAGGTTAAGCGTGCGTTGTTTCACCTTAT
GTTACTTACCACTTAGCACGCGATATCATTTTGANACTTGCGAAATTTAC
ATATTCAAGTATTAGTTAATCGGGAAAATGGTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035161-exon-sc0001265-1575043694:35048..35680 | TCONS_00035161-exon-sc0001265-1575043694:35048..35680 | Clytia hemisphaerica | exon |
| TCONS_00035161-exon-sc0001265-1575043694:34545..34580 | TCONS_00035161-exon-sc0001265-1575043694:34545..34580 | Clytia hemisphaerica | exon |
| TCONS_00035161-exon-sc0001265-1510915933:35048..35680 | TCONS_00035161-exon-sc0001265-1510915933:35048..35680 | Clytia hemisphaerica | exon |
| TCONS_00035161-exon-sc0001265-1510915933:34545..34580 | TCONS_00035161-exon-sc0001265-1510915933:34545..34580 | Clytia hemisphaerica | exon |
| TCONS_00035161-exon-sc0001265-1491911889:35048..35680 | TCONS_00035161-exon-sc0001265-1491911889:35048..35680 | Clytia hemisphaerica | exon |
| TCONS_00035161-exon-sc0001265-1491911889:34545..34580 | TCONS_00035161-exon-sc0001265-1491911889:34545..34580 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001265 | supercontig | sc0001265:34545..35680 - |
Blast
The following BLAST results are available for this feature:
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