TCONS_00035142 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035142
Unique NameTCONS_00035142
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035142 ID=TCONS_00035142|Name=TCONS_00035142|organism=Clytia hemisphaerica|type=transcript|length=108bp
CTACAATGGAGGGCATTCTATTCTTCCAGATAGAAATACCAACAACACAA
ACAActtatttgttttgtttcattaACATTTTACTTATTGAACAATGCTG
TTTGTAtc
Run BLAST on NCBI

transcript from alignment at sc0001261:52160..52267

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035142 ID=TCONS_00035142|Name=TCONS_00035142|organism=Clytia hemisphaerica|type=transcript|length=108bp|location=Sequence derived from alignment at sc0001261:52160..52267 (Clytia hemisphaerica)
gaTACAAACAGCATTGTTCAATAAGTAAAATGTtaatgaaacaaaacaaa
taagTTGTTTGTGTTGTTGGTATTTCTATCTGGAAGAATAGAATGCCCTC
CATTGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020486XLOC_020486Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035142-exon-sc0001261-1491911889:52160..52267TCONS_00035142-exon-sc0001261-1491911889:52160..52267Clytia hemisphaericaexon
TCONS_00035142-exon-sc0001261-1510915933:52160..52267TCONS_00035142-exon-sc0001261-1510915933:52160..52267Clytia hemisphaericaexon
TCONS_00035142-exon-sc0001261-1575043694:52160..52267TCONS_00035142-exon-sc0001261-1575043694:52160..52267Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001261supercontigsc0001261:52160..52267 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035142 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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