TCONS_00035111 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035111
Unique NameTCONS_00035111
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length318

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035111 ID=TCONS_00035111|Name=TCONS_00035111|organism=Clytia hemisphaerica|type=transcript|length=318bp
aaatgaatttatttacggttTCGGATAAAATGTCGATTTTGGTTTTAATT
TGCGTTCCGAAAATTAAAGATCAGAAGCGTGCAATTCAAAAGGGTGTTCT
GAGTGATGCTATTCACACGTCGGCAAGCTCTCAACTAGTAACTTCTTGCA
AACTCTAGCAAAAGTTAATTGAAAAACAAACCCACCCAACACCAATGATG
AACAGGGAAGGAACAATATGTAAGGAACAGACAGTGTCAATGATAGAAGA
AAGACATCCATACATAAGAAAGACCACAAGGGCAAAAGTTAAGTATAtgg
gtttgttttgatcttaCA
Run BLAST on NCBI

transcript from alignment at sc0001253:428..745

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035111 ID=TCONS_00035111|Name=TCONS_00035111|organism=Clytia hemisphaerica|type=transcript|length=318bp|location=Sequence derived from alignment at sc0001253:428..745 (Clytia hemisphaerica)
TGtaagatcaaaacaaacccaTATACTTAACTTTTGCCCTTGTGGTCTTT
CTTATGTATGGATGTCTTTCTTCTATCATTGACACTGTCTGTTCCTTACA
TATTGTTCCTTCCCTGTTCATCATTGGTGTTGGGTGGGTTTGTTTTTCAA
TTAACTTTTGCTAGAGTTTGCAAGAAGTTACTAGTTGAGAGCTTGCCGAC
GTGTGAATAGCATCACTCAGAACACCCTTTTGAATTGCACGCTTCTGATC
TTTAATTTTCGGAACGCAAATTAAAACCAAAATCGACATTTTATCCGAaa
ccgtaaataaattcattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020456XLOC_020456Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035111-exon-sc0001253-1491911889:428..745TCONS_00035111-exon-sc0001253-1491911889:428..745Clytia hemisphaericaexon
TCONS_00035111-exon-sc0001253-1510915933:428..745TCONS_00035111-exon-sc0001253-1510915933:428..745Clytia hemisphaericaexon
TCONS_00035111-exon-sc0001253-1575043694:428..745TCONS_00035111-exon-sc0001253-1575043694:428..745Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001253supercontigsc0001253:428..745 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.80623	2.90956	0	2.16295	0.256936	0.693592	1.56929	1.56678	2.34752	4.92594	0.329707	1.80498	3.26171	5.67577	0.978523	3.30309	1.71477	2.16779	2.03338	5.79205	2.74411	1.66718	2.87031	2.49997	0	0	3.3219	4.24577	3.42976	4.20434
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035111 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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