TCONS_00035110 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035110
Unique NameTCONS_00035110
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035110 ID=TCONS_00035110|Name=TCONS_00035110|organism=Clytia hemisphaerica|type=transcript|length=189bp
GATTCTACAATCCCTCTTTCAAAGCATCAAAAACTTTATATTGTTAAATC
ATACTATGCAAAGTctctttttccttttaaaaaattgctCAGTCAGAAAA
ACAATATACCTATGGCAGTCGCAAAATATTTCTGCATAATGAACAATAAT
TGCACGGAATAAAACATTAATTTCTGTTCGATTTCTTTT
Run BLAST on NCBI

transcript from alignment at sc0001253:13..201

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035110 ID=TCONS_00035110|Name=TCONS_00035110|organism=Clytia hemisphaerica|type=transcript|length=189bp|location=Sequence derived from alignment at sc0001253:13..201 (Clytia hemisphaerica)
AAAAGAAATCGAACAGAAATTAATGTTTTATTCCGTGCAATTATTGTTCA
TTATGCAGAAATATTTTGCGACTGCCATAGGTATATTGTTTTTCTGACTG
agcaattttttaaaaggaaaaagagACTTTGCATAGTATGATTTAACAAT
ATAAAGTTTTTGATGCTTTGAAAGAGGGATTGTAGAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020455XLOC_020455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035110-exon-sc0001253-1491911889:13..201TCONS_00035110-exon-sc0001253-1491911889:13..201Clytia hemisphaericaexon
TCONS_00035110-exon-sc0001253-1510915933:13..201TCONS_00035110-exon-sc0001253-1510915933:13..201Clytia hemisphaericaexon
TCONS_00035110-exon-sc0001253-1575043694:13..201TCONS_00035110-exon-sc0001253-1575043694:13..201Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001253supercontigsc0001253:13..201 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035110 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top