TCONS_00035037 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035037
Unique NameTCONS_00035037
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035037 ID=TCONS_00035037|Name=TCONS_00035037|organism=Clytia hemisphaerica|type=transcript|length=151bp
GAGTTATGACACTGGTGACAACATTTCCTGTACGTATTTGGCAACTAGTA
TGGTACAGTCTGATTTCTCTTATTGGTACAATTGGTAATAGTTTGGTCAT
CTATTTGATTTGCGCAGCGAAGAAAAGTAAAATAGATAGAAAAGCACCGT
T
Run BLAST on NCBI

transcript from alignment at sc0001242:345..495

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035037 ID=TCONS_00035037|Name=TCONS_00035037|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at sc0001242:345..495 (Clytia hemisphaerica)
AACGGTGCTTTTCTATCTATTTTACTTTTCTTCGCTGCGCAAATCAAATA
GATGACCAAACTATTACCAATTGTACCAATAAGAGAAATCAGACTGTACC
ATACTAGTTGCCAAATACGTACAGGAAATGTTGTCACCAGTGTCATAACT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020389XLOC_020389Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035037-exon-sc0001242-1491911889:345..495TCONS_00035037-exon-sc0001242-1491911889:345..495Clytia hemisphaericaexon
TCONS_00035037-exon-sc0001242-1510915933:345..495TCONS_00035037-exon-sc0001242-1510915933:345..495Clytia hemisphaericaexon
TCONS_00035037-exon-sc0001242-1575043694:345..495TCONS_00035037-exon-sc0001242-1575043694:345..495Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001242supercontigsc0001242:345..495 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035037 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top