TCONS_00035034 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035034
Unique NameTCONS_00035034
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3454

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035034 ID=TCONS_00035034|Name=TCONS_00035034|organism=Clytia hemisphaerica|type=transcript|length=3454bp
CATTTCTAATACATGTTTTTCAATACATACTCTAGATGATGATCAAGATT
TTGTCTCAGCTGAAAATCAACCCAAAGacTTCAAAGATGAAATTAAAGCC
TGTGAAATCTTAcagatttttatgaaatgtaGAGAAGCAATTGTTCTTGA
ACAAGACTTCCAAGCTTTGATCAAACAAAGCTTATTTGATCCGAACTTCC
CATCTACAGGAACTCCATCTTTACTCATtgcagaaaatgaaattttgtca
CTATCGACTTACTCAAAATGCACTGATGGTATCTTTCATGTTATGCCATT
AATATTTGAAGTTTGTGGGGAAAATCAGCTATATCTAAGATCGTTTGAAA
CAGGTGTTTATCAAGGGTTTATTCAGAACAACTGGAAAACATTGTTTAAT
GACATTATCACAAAGTTCAAAATTAAGCATTGCAATATTGTGTCGATTTA
TAATACTTGGGATGTTCTTGCTGCTCAACATCGTCGAATCGAAACTAAAA
ATAGTTCTACATCAGacagaaattcaaaaatctttgaCCAAAAGACACAA
AGCAACAAGTCATCCATTCAGAGAAATCTACCAGTTGCTTATTCCATATT
CAAGCAGTCGTTCGGTGATAATGCGCCTGGATTTGTCTTCTTTACTCGAC
GAATGGCTAAATTTACGAAGAAAAATTGCCCGAATACTGAGTTTTACAAG
ATGGTTGGACTTGGTGACTCTAGACAGTGGAAGACAGAGTTACTAAATTA
TAAAATGAGTACTAGTATTACGTCAGAAAAATCTGCCATACTGCAATCGT
TGCAGACTTTTGGTCAAATCGAAAATCTTCCAATTGAATgtcaatttcaa
attatttcttccTTACCAAATTACCATAAGTGGGCGTACAGGAAAAACAC
TAGTGTTAAGAAGAAGCAGTACTTTACACCAAATGGTCTTTCACCAAGAA
ATTTGATGATCCAATCCTTTGATGACGCacctatgaaaaaaattatcttt
ctcAAATTGAAAAACGCTTTCAATATTAAATATATTCCAAGTGGAAGTTA
CAAAAAACGAACAAAGTCCCAAAATTCTGGAAAACGTCGAGCAAATGTTG
ATCGAAGTTTTCTCCTCGAACATCTTGGCGTTACGGAAGACGACTTTGCT
CAAACATATACTGCCAGTTTACCATCAGACATGTATGAAGAGTTCAAGCG
AGCAATATATTTGGACAGCACACTCTTGTGGCGGGAAAAAAGTCGCAGAC
TCCAAACTGTTGTGATGAACGATTACAATTCTGTTTCTGGATTAATTAAA
TTCAACGAATTCGTGACCACAACTCGCAACGTTGAAGACAATCATACTAA
CATACAATGCGCGTGTGAAACGTTTAAAGTGCTATCGACAACAATTGGTT
CATCGGATTGGGATGGTGAAAGTTGTATGCACGCTCGCTTGcttgaaaat
attattgaagAGTTTAACATCGATTTCCACGAATCTAGCGAACATGGTTA
TTCAATTCCTCAGTCGAACATGGAAATGGGAACAGTTGTTGCTAGCAAAA
TTAAGATGTCATTAGAGGCTGTTACACAAGATGTTATTCTGCTATCATCG
GCCGAAACGATTGAAAAGTTTTCCGTTCGCTCAATTTCCAGTCACCAATT
TGTGCACATCTTCGCTTCAAACGATAAGACACGCGTGTATGTCAAATGCT
CATCAGGCTTGTGTGTGCATGCTCATTCAAAGAAAGTTTTGCTTCGGAAC
TTAGAGGAAGATGAACGCTGTGATCATTTGGAGGTGTTCAAACGCTACAA
TGACGAGAACTGGCAAAATCATCCTTTGATGCAACTTCGCAGTGAGACGC
CTGAACCTAATGTACCAAGTGATGGTGAAACTGACAGTGATACTGATGGA
AATCAACAAGAGGACGATCACTCGCCACTAATTGATGAAAACCCTTTTGA
GAAGACCAATGGTTTCGACTCATCGACCGGGAAGTGGTCCTTCTATTCAC
CATACGCTCGCGATGTCAACCTAAAACGTGAAGATTTAGAGGAACAGTTT
CTTCAGCATTACGAATCCAGTCTTCAAGCATTACGTGACAAAGACTTCAA
ATTGTCTTTTTATCCAAAGCCTCTTCTGCCCACATGTGCCTGTGAGATAC
CTTGGCCacaagatgatgatgatggataTTTGTTTACCAAAGAATGTTCC
GCATCGTTTTCCACCAATTTAACGATGATACCGTGTGATGTTTACAAACT
GTCTTGCTCGGAGAATAAGTGCACGTTGAAATGGGATGGACAGCTTGATG
GAGTGTATCGAATCTCGCAACAAACCTGCTTTACCGAAAAGCTCTGCTGG
GACTTCGTTGATTCAGTGTCCACAATAAAGTCAAACTTTTCATCCTAATT
TCCAACACATACACATGTTTGGGAACACGTCCCTTTGTTTCTGCGAAAAC
CTTCTCGAAGTTGTTTTTCTCTTGGGCCAGTCACCAACCCAGAGAATTTC
GTAAAAGCTGTACTTGGTGTGGTTGAGATCCAAAAGTGTTGCCTTGTGAT
GGTACAAAGATCAGCATTTTGCACCACAACATGTCANTGGTTGTGATCCC
AAAGTGTTGGCTTGTGATGGTACAAAGATCGGCATTTTGCACCACAACAT
GTCAATTACACCCATTGAACAAACGAACCCCGAAGCAGTAACAGTACCAA
CCCCTAATCGCCGCTTCGATCGATGTTTCTTGACCTACCCCAAAACGTCG
cagaatgaaaatgaagatgaacacAAGAAGAAGTGCGAAAACGTTAGAAG
TGCTCGAGATTTTCTCAAACTATTTACGGCGAAAGTCCCGGACCAGAAAC
TTGCAGAAATGCCTATAGCAGAACAAACtaagcaaaaacaaaacgtcatt
TCTTTGCTTTCAGAAGACTGTAAACCCTTAGCAAAGAGATTTTTCCTGCA
ACATCTGATGACGGATCAGCTTGCAACAACAAAGCGCTGCCTTAACGTTT
TAAGCTATGATACACCACTGCGCGCATTTTTGCCACATAACCTGATCAAC
GTGATAGCACCTTTGTTAGAAATCGAGAACGGATTATCCTtagacaaagt
ccaaaaaatcatCAGAGAAACAAGACAATACAGTCGGTACGTTGGCAACT
GGATCAAGTCTTTCTCAAGTAATACCACGATCGACAATGACTTGGTTTCT
TTCTTGAAATGTCTGGTTGACGAAATCTTGAAAGTTGAGGCACAGTGCGT
AGCTCCGCCAGAAACTGAAGAAGGAGCTGGTCAATATAATCCTGCTAAAA
CGGGTGCCTTTTACTACTTCAAAGAGGATGGAGCGCCGGTCCGTAGTAAT
CGTCTTTAAGATatcgaaaaaagaagaaaataaatcgAAATCAAACaaat
ctacccatgatccaatccatctacccatgatccaatccatctaccggtga
tcca
Run BLAST on NCBI

transcript from alignment at sc0001242:44383..54274-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035034 ID=TCONS_00035034|Name=TCONS_00035034|organism=Clytia hemisphaerica|type=transcript|length=9892bp|location=Sequence derived from alignment at sc0001242:44383..54274- (Clytia hemisphaerica)
CATTTCTAATACATGTTTTTCAATACATACTCTAGATGATGATCAAGATT
TTGTCTCAGCTGAAAATCAACCCAAAGGTACACAGTTAATATCTCATTTT
AAACTTTCAATAGATTTATGTATCAATGATCAATTGATATAAATTGATTA
TTACGAACTTTATTTAAACAAAATACAAAAACGTATTTACAAATTTAGAA
AACATACTAAACATCGTACTTCAAGTTGTTCGAAAAATGTTGAAATATCA
TATTTCGAGACATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTATCTTGACACTATCTTGACACTACCTTGACACTA
CAAACTGACAGTTGAACATTATTAAGTTATTATAACCTTTGGCATGCAAT
TAAATTCCAAAATTCGAAATTTCTAATACATGTTTTCCAATACATACTCT
AGATGATGATCAAGATTTTGTCTCAGCTGAAAACCAACCCAAAGGTACAC
AGTTAATATCTCAAAAACTTTCAATAGATTCTATGCAATTTTAGATTTGA
TCAGATTTGATAAATTTCTAGAATTGATCAATTTTTTTATCTTTTTTAGA
CTTCAAAGATGAAATTAAAGCCTGTGAAATCTTACAGATTTTTATGAAAT
GTAGAGAAGCAATTGTTCTTGAACAAGACTTCCAAGCTTTGATCAAACAA
AGCTTATTTGATCCGAACTTCCCATCTACAGGAACTCCATCTTTACTCAT
TGCAGAAAATGAAATTTTGTCACTATCGACTTACTCAAAATGCACTGATG
GTATCTTTCATGTTATGCCATTAATATTTGAAGTTTGTGGGGAAAATCAG
CTATATCTAAGGTATATAATTTACTATCAGATTTTCTTTTGTAAATATTG
TTCATGGTTTCAGCCCCCTGGATTTCTTAAGGGCCCCTAGGCCAAGTGTG
GAGTTTTGGCCTAAAATTTAGCAAATCTATGGGGTTACCTGTTCATTGGG
GGTACATAGCTGCTCCTGATAGAGGCTCTATCTAGGTGCTGTTTGTTTAT
CTGTATTTTCCAAATGGAATACTTCAGAGTATAAGTTGAAATCTTTTGGC
CCATACTTTCTCATTTTTGTTTTTCTTTTCCAGTTTTTTTTTTTCATTGT
GCTGCCATTCTTCATAGCATAACAACAAAGCTTTTTTACAAAAAAATTCT
CGGGTGAAGGGGAGCACCTAACCCAGGAGCAAATTCTTAAGGGTAGCTAA
ATCATTGCGGCACCTTATTTCGTTTGGTGTACCTAAAAAGTGGGCTGAAA
CCATCTTGTTGAATTATTGAAAGGAAAACTTTGAAAACTGACACTGAGCT
TAAAGGTAACATAAAATACTATTTTTTTCCAGATCGTTTGAAACAGGTGT
TTATCAAGGGTTTATTCAGAACAACTGGAAAACATTGTTTAATGACATTA
TCACAAAGTTCAAAATTAAGCATTGCAATATTGTGTCGATTTATAATACT
TGGGATGTTCTTGCTGCTCAACATCGTCGAATCGAAACTAAAAATAGTAA
GGAATTCTTTTTCATAGTTTCAATGCAGGTCCTCTTTTTGGTTGAAGTTA
ATTTGGCTAATCTAAATTATTGTAATCTAAAAATGTTTATTGTATACCAA
TTTATAAACCAAAAAGTGGTNTTGTAATCATACATGATCAATCTAAGTAT
CAATCAGATTCGTGCTCCCTGGTCAGTAAAATGTGGTTCTATGCATTCAT
TTTCGGTATTTCTTATCTGGTCTGTAAAATATTTAGGTACCCCACAACCT
AGCCCAATTGGCTAGCCCAATTGGCTACCCTGCTTTTTAGACCAACCCCC
AAAAAGTAATTTTATGTTTAATTTCTCTTTGTACAAGGCTCTACATCAGA
CAGAAATTTTGACCAAAAGAAACAAAGCAATAAGTCATCCATTCAGAGAA
ATCTACCGGTTGCTTATTCCATATTCAAGCAGTCGTTTGGTGATAATGCG
CCTGGATTTGTCTTCTTTACTCGACGAATGACTAAATTTACGAAAAAAAT
TGCCCGAATAAGGAGTAAGAGTTTGTTTTCCATCGTCACACTAAGAGCAA
CTAAAGATAGACAAGTAATAAGTAAAGTATGAAAGCAATAAAACATCAGT
ATTTCTTCTTGTTTCTTGTTAAACGGGCCTTTAAGTGTCTTTTGGTATTA
TAAACATCCATTCGATTTTCAAATTAAATTTATAAGAAAAACAAAAACTT
CGTAACGTTTTTACAATTCTTTATTTATTTTATAGGTTTTACAAGATGGT
TGGACTTGGTGACTCTAGACAGGGCCGGCGAATCAATTTTGAAAGTGGAT
GGGCCAAATAGTAAGTGTCTAAGGAGGCGCCACCATGGTTGGCGCCGACG
GACCTTTCTTAGCAAAAAAGTGGGGGGGGGGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAATGGGGTAGCCAATTGGGCTAGGCTATGGGGTA
CCTCTTTTTGCCTAAACTTTTGAAATCTGAAACCTGTTTTCATGTGGAAA
TAACTATTACAACATCTTGTTAATGCNTTGTGTCGATTTATAATACTTGG
GATGTTCTTGCTGCTCAACATCGTCGAATCGAAACTAAAAATAGTAAGGA
ATTCTTTTTCATAGTTTTAATGCAGGTCCTCTTTTTGGTTGAAGTTAATT
TGGCTAATCTAAATTATGTTTATTGTATACCAATCTATAAACCAAAAAGT
AATTTTATTTTTAATTTCTCTTTGTACAAGGTTCTACATCAGACAGAAAT
TCAAAAATCTTTGACCAAAAGACACAAAGCAACAAGTCATCCATTCAGAG
AAATCTACCAGTTGCTTATTCCATATTCAAGCAGTCGTTCGGTGATAATG
CGCCTGGATTTGTCTTCTTTACTCGACGAATGGCTAAATTTACGAAGAAA
AATTGCCCGAATACTGAGTAAGAGTTTGTTTTCCATCGTCACACTAAGAG
CAACTAAAGATAGACAAGTAATAAGTAAAGTATGAAAGCAATAAAACATT
GGTATTTCTTCTTGTTTCTTGTTAAGTGTAAATGTTTTCTTGTTTTAAAC
GGGCCTTTAAGTGTCTTTTGGTATTATAAACATCTATTCGATTTTCAAAT
TAAATTTATAAGAAAAACAAAAACTTCGTAACGTTTTCACAATTCTTTAT
TTATTTTATAGGTTTTACAAGATGGTTGGACTTGGTGACTCTAGACAGTG
GAAGACAGAGTTACTAAATTATAAAATGAGTACTAGTATTACGTCAGAAA
AATCTGCCATACTGCAATCGTTGCAGACTTTTGGTCAAATCGAAAATCTT
CCAATTGAATGTCAATTTCAAATTATTTCTTCCTTACCAAATTACCATAA
GTGGGCGTACAGGAAAAACACTAGTGTTAAGAAGAAGCAGTACTTTACAC
CAAATGGTCTTTCACCAAGAAATTTGATGATCCAATCCTTTGATGACGCA
CCTATGAAAAAAATTATCTTTCTCAAATTGAAAAACGCTTTCAATATTAA
ATATATTCCAAGTGGAAGTTACAAAAAACGAACAAAGGTTTTTACAAATT
ATTTATTTAATTAAATTTGCATTGCTCAGAGATTGAATTAACGGTCGGTT
ATCGGATAAAACCAAGAAACAAAAATAAAAAACAACCTTATATTTTTCCA
TCTTTAGATAATAACCGACTAGTATTTCAGCTTTTTTTCTAGATCTCCTC
TGGCTGAACCAAAATTGATATTAAATACGAATGATTTATTAAAATAACAG
ACAAGAAAAAAAAAGCCCTATTTTGTTTCTTTGTGTTGTCTTATAAACTT
TTTTTGAAAAATTTATTATCTAATATAAAATTTGATATATTTTCAGTCCC
AAAATTCTGGAAAACGTCGAGCAAATGTTGATCGAAGTTTTCTCCTCGAA
CATCTTGGCGTTACGGAAGACGACTTTGCTCAAACATATACTGCCAGTTT
ACCATCAGACATGTATGAAGAGTTCAAGCGAGCAATATATTTGGACAGCA
CACTCTTGTGGCGGGAAAAAAGTCGCAGACTCCAAACTGTTGTGATGAAC
GATTACAATTCTGTTTCTGGATTAATTAAAGTAAGATACGTTTTAACCTT
GAAAATATTAAAGTCTATTCACGATAAGTGTACACTCTTTTTTCTTTTAC
CTATAACTTTTGAAAGAATTCTTCAATCTTTATAAATTTGGTATCGTTGG
AGAGANNNNNNNNNNNNNNATCGTTGGAGAGATATTTGTGAGTGGAACAA
TTTGAAATAAAAAAATCTTCAAAAAAATTCTAAAAATGAAGATGAAAATG
AAGAAGAAAATAATGAAGATCTTGTAGAAAAGTGCTATAACTTTTACTTT
CACTGGAGATATTCTTTGATCTTTGGAGGTCATCACTGTGAAGAAATTTC
ACAAAAATATTTATTCAATACAAAGTTATAATGATACAAAGTTAATAAGT
GAATAACCCCAAAAAACAGCAGAAAACAGCAGAAAACAGCGTTTTTAGAC
GTCAATTAGCTTATAACTTTGTTTGATATCTTTTGATTGAATGATTATTT
TTGAGAAATTTTTTCACAGTGATGACGTTCTATGATCAAGGTCTCACTTC
AGTGAAAATGATAGTTATAGCACTTTTCTACAAGATCTTCATTTTTTTCT
TCTTCATTTTCATCTTCATTTTCAGAATTATTTTGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCTTTCCAATGACACCAAATTTATAAAGATTGAATAATTCCTTCAAAAGT
TATAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAATT
ATCATAATCTTTGATGTATATACAAAATATAATTGTTTTGATTAGACAAT
CCTGCGTGCTTTCTGAAAATTGTTATTGTAGGTCATTTTTATAAATCTTA
TAGTTCAACGAATTCGTGACCACAACTCGCAACGTTGAAGACAATCATAC
TAACATACAATGCGCGTGTGAAACGTTTAAAGTGCTATCGACAACAATTG
GTTCATCGGATTGGGATGGTGAAAGTTGTATGCACGCTCGCTTGCTTGAA
AATATTATTGAAGAGGTTAGTCAATTGTTTTAGAATTATCGTTTATGAAT
TTTGATTTCAATACCAATAGTTTCCCGTGTCTCCACGATCATAAGTTGAA
AATTGAGAAAGTTGAAAATAAATTTAAAATATATATCTTTTGAGAAAATA
AATTCATATAATGAAGTTTGGTTTTTAATAGATCTTTTCTGTGTTAAGAT
GACATGTTATAATGTCCAGTATAAATTGTATTTATTTTCACCGGCTCACT
CTCCGTTCTTTCTTTTATTATATTTTCAGTTTAACATCGATTTCCACGAA
TCTAGCGAACATGGTTATTCAATTCCTCAGTCGAACATGGAAATGGGAAC
AGTTGTTGCTAGCAAAATTAAGATGTCATTAGAGGCTGTTACACAAGATG
TTATTCTGCTATCATCGGCCGAAACGATTGAAAAGTTTTCCGTTCGCTCA
ATTTCCAGTCACCAATTTGTGCACATCTTCGCTTCAAACGATAAGACACG
CGTGTATGTCAAATGCTCATCAGGCTTGTGTGTGCATGCTCATTCAAAGA
AAGTTTTGCTTCGGAACTTAGAGGAAGATGAACGCTGTGATCATTTGGAG
GTGTTCAAACGCTACAATGACGAGAACTGGCAAAATCATCCTTTGATGCA
ACTTCGCAGTGAGACGCCTGAACCTAATGTACCAAGTGATGGTGAAACTG
ACAGTGATACTGATGGAAATCAACAAGAGGACGATCACTCGCCACTAATT
GATGAAAACCCTTTTGAGAAGGTATAGAAATATTGAACAATATTTTTTGA
AAAGCTTTACTTTTCCATTTTTATTGTGGCTCTTCCAGGTTATCAGTGGA
ATAACTGTCAAAGTTTAGGACAGAAATGAGTAAAAAGGTTCTAAGAAATA
AAGAGAAGCTGCAACGACTTGTTTTTTCTCATCACTAAATTTTGAATGTT
GTTTTATAGACCAATGGTTTCGACTCATCGACCGGGAAGTGGTCCTTCTA
TTCACCATACGCTCGCGATGTCAACCTAAAACGTGAAGATTTAGAGGAAC
AGTTTCTTCAGCATTACGAATCCAGTCTTCAAGCATTACGTGACAAAGAC
TTCAAATTGTCTTTTTATCCAAAGCCTCTTCTGCCCACATGTGCCTGTGA
GGTATGTTTTTCAAGAGTTTACAAAAATGTGCCATTTTGTTTCTTTGACA
GTAATTACTGAAAATGGGATCTTCTAGAGCTTAAAAATCTTTCTATTGAC
TATTTGCCTATCATATTGTTCTGTTAATAAATGTTTATCGTTTTCTTGTT
TCCCGTGTTACCGTAATACTGAAAAGCACTTGCTTAAAATTCTTTGAGAC
AGGGTTAGTATATTATGGTATGAATTAGAGAGATCCCTCTGCACACGACT
TCTTTTGGGTAAAATAAAGAGCACCCAGGCCATGGAGCACCTATAAATTA
AAAACAGTACCCAGCAGTGCGATGTTAGCTTTTTTTGGAAATAGATGTAT
AGTAACTGATAGAAATACTAATAGAAAGAGTACCTTTTTATTCTTCTTCC
TTTACTTAAGCTTGAGAATTGGTGCTTATTTTAGATACCTTGGCCACAAG
ATGATGATGATGGATATTTGTTTACCAAAGAATGTTCCGCATCGTTTTCC
ACCAATTTAACGATGATACCGTGTGATGTTTACAAACTGTCTTGCTCGGA
GAATAAGTGCACGTTGAAATGGGATGGACAGCTTGATGGAGTGTATCGAA
TCTCGCAACAAACCTGCTTTACCGAAAAGCTCTGCTGGGACTTCGTTGAT
TCAGTGTCCACAATAAAGTCAAACTTTTCATCCTAATTTCCAACACATAC
ACATGTTTGGGAACACGTCCCTTTGTTTCTGCGAAAACCTTCTCGAAGTT
GTTTTTCTCTTGGGCCAGTCACCAACCCAGAGAATTTCGTAAAAGCTGTA
CTTGGTGTGGTTGAGATCCAAAAGTGTTGCCTTGTGATGGTACAAAGATC
AGCATTTTGCACCACAACATGTCANTGGTTGTGATCCCAAAGTGTTGGCT
TGTGATGGTACAAAGATCGGCATTTTGCACCACAACATGTCAATTACACC
CATTGAACAAACGAACCCCGAAGCAGTAACAGTACCAACCCCTAATCGCC
GCTTCGATCGATGTTTCTTGACCTACCCCAAAACGTCGCAGAATGAAAAT
GAAGATGAACACAAGAAGAAGTGCGAAAACGTTAGAAGTGCTCGAGATTT
TCTCAAACTATTTACGGCGAAAGTCCCGGACCAGAAACTTGCAGAAATGC
CTATAGCAGAACAAACTAAGCAAAAACAAAACGTCATTTCTTTGCTTTCA
GAAGACTGTAAACCCTTAGCAAAGAGATTTTTCCTGCAACATCTGATGAC
GGATCAGCTTGCAACAACAAAGCGCTGCCTTAACGTTTTAAGCTATGATA
CACCACTGCGCGCATTTTTGCCACATAACCTGATCAACGTGATAGCACCT
TTGTTAGAAATCGAGAACGGATTATCCTTAGACAAAGTCCAAAAAATCAT
CAGAGAAACAAGACAATACAGTCGGTACGTTGGCAACTGGATCAAGTCTT
TCTCAAGTAATACCACGATCGACAATGACTTGGTTTCTTTCTTGAAATGT
CTGGTTGACGAAATCTTGAAAGTTGAGGCACAGTGCGTAGCTCCGCCAGA
AACTGAAGAAGGAGCTGGTCAATATAATCCTGCTAAAACGGGTGCCTTTT
ACTACTTCAAAGAGGATGGAGCGCCGGTCCGTAGTAATCGTCTTTAAGAT
ATCGAAAAAAGAAGAAAATAAATCGAAATCAAACAAATCTACCCATGATC
CAATCCATCTACCCATGATCCAATCCATCTACCGGTGATCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020388XLOC_020388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035034-exon-sc0001242-1575043694:54198..54274TCONS_00035034-exon-sc0001242-1575043694:54198..54274Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:52214..52475TCONS_00035034-exon-sc0001242-1575043694:52214..52475Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:51529..51692TCONS_00035034-exon-sc0001242-1575043694:51529..51692Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:49558..49744TCONS_00035034-exon-sc0001242-1575043694:49558..49744Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:48938..49313TCONS_00035034-exon-sc0001242-1575043694:48938..49313Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:48395..48628TCONS_00035034-exon-sc0001242-1575043694:48395..48628Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:47260..47421TCONS_00035034-exon-sc0001242-1575043694:47260..47421Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:46504..46995TCONS_00035034-exon-sc0001242-1575043694:46504..46995Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:46124..46315TCONS_00035034-exon-sc0001242-1575043694:46124..46315Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1575043694:44383..45690TCONS_00035034-exon-sc0001242-1575043694:44383..45690Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:54198..54274TCONS_00035034-exon-sc0001242-1510915933:54198..54274Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:52214..52475TCONS_00035034-exon-sc0001242-1510915933:52214..52475Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:51529..51692TCONS_00035034-exon-sc0001242-1510915933:51529..51692Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:49558..49744TCONS_00035034-exon-sc0001242-1510915933:49558..49744Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:48938..49313TCONS_00035034-exon-sc0001242-1510915933:48938..49313Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:48395..48628TCONS_00035034-exon-sc0001242-1510915933:48395..48628Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:47260..47421TCONS_00035034-exon-sc0001242-1510915933:47260..47421Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:46504..46995TCONS_00035034-exon-sc0001242-1510915933:46504..46995Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:46124..46315TCONS_00035034-exon-sc0001242-1510915933:46124..46315Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1510915933:44383..45690TCONS_00035034-exon-sc0001242-1510915933:44383..45690Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:54198..54274TCONS_00035034-exon-sc0001242-1491911889:54198..54274Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:52214..52475TCONS_00035034-exon-sc0001242-1491911889:52214..52475Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:51529..51692TCONS_00035034-exon-sc0001242-1491911889:51529..51692Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:49558..49744TCONS_00035034-exon-sc0001242-1491911889:49558..49744Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:48938..49313TCONS_00035034-exon-sc0001242-1491911889:48938..49313Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:48395..48628TCONS_00035034-exon-sc0001242-1491911889:48395..48628Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:47260..47421TCONS_00035034-exon-sc0001242-1491911889:47260..47421Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:46504..46995TCONS_00035034-exon-sc0001242-1491911889:46504..46995Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:46124..46315TCONS_00035034-exon-sc0001242-1491911889:46124..46315Clytia hemisphaericaexon
TCONS_00035034-exon-sc0001242-1491911889:44383..45690TCONS_00035034-exon-sc0001242-1491911889:44383..45690Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001242supercontigsc0001242:44383..54274 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000273288	0.500371	6.38585e-05	5.43389e-07	1.86706	5.53566	3.2152	11.9253	6.59288	12.3284	0.0222161	6.83937	9.91816	0.0903979	1.95834	0.00210819	0.89865	4.45558	0.00309307	0.00251756	1.90316	4.20813	2.07347	1.09485	6.04403	12.4256	6.24827	2.72186	1.77866	0.0376873
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035034 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top