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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00034971 ID=TCONS_00034971|Name=TCONS_00034971|organism=Clytia hemisphaerica|type=transcript|length=1320bp
ATAAAATAAGATATTGGGTTAAGTCAGAGCTTTTCAAGACGAGAGGAGTA
CCGCCATTCTAACGCCCGATTTAATTACGCTATGTTTAAGCGTGCGTCAA
CAATTACGTAACCCAGACATCAGCCCAAGTAGCCTTAACAGTAAAACAAT
TTAAAGCTAATCAGAGGGACTAAAGAATTTCCGTGTTGAGCAGGTTATCC
ATTCCGGAGAGTTATACAGGCTGTTATCCATCTAATTcatcaataatttt
caaaaatcacccAAATTCGGAAGCCAATTAAGAGATTTCAAGCATGTCTC
TCATTTTAATATCAACGATATCCTAAATTTCCACCGAGTTAATTAATCAA
TATTCTAAGACCTTTGTTTTGCCTCGTCACGACCGGTATTTAAATTTCCG
TGTCAATTTTCGTCTAACGAATCATTATTCTACCAATTTAGAAACTACAT
TAACATTTTTGATTGTATGCTACACAGTGTTGTATAGTAGCCAGGAGAGG
CGTAACTACAAAATATGAATATACCTATATTATATATATCTCTAGCTTGT
TCTTCACCCATTTAATTCTCAGATTCAGCAGTTGATGCTAAAGTATATAT
ATGCTAAGCATTGTAAAATTTTCACTAAGTCAAGTTTGACAAAAATAGAA
GTTTCGAAGTTTTAAGTCTACGACATAAGACTTCTATGCAACGGCGGCTA
CAAAAGTTCCTCAAGATTAATGTCTGagaatatttcttttcttattgTCC
CTCTTATGGGAGTAATTGCTCTCTGTAATGAACATATTTAAATACCTTTC
GTAAATGTCGTATGTGTGGGTCATCAGTCAGACTCAGAATCATTCATTCG
GTCTACCATTCAAGAGCCCCCCAGCGGTAAGGCAATTTTTTGgcaatcac
gatcacgaaaatcagcaaaaaaattggataatcacgcatccctttaAAAA
AGTCTAAATCACGCATCAAGATCATGTtttgatcacgcaatcacggaaaa
aaattccaaatcacgtaatcacgctagaACAAAGTCACGAGAACCGCTTA
GGGGACTCATTCAAAACCATTAAATCTGCAATGCCATGGTTCTTTTATAT
CCTGACATGAAGTATATATGTTACATTTATTAAATTGTGATGAGATTTCC
TGGTCCCTTTTGTGCAATGATATATATATAACCTACTTCTGCATGCCCAA
TATAGGGAAGGAAGTTTGTAGGAGTTCAAAATACTgtcaaaattttggcc
aaatcccggaatcccgaaaattgaaaaaataatgacaCGGTCACATCGGC
ttgtagaggttaaaatacTG Run BLAST on NCBI transcript from alignment at sc0001236:50962..52281 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00034971 ID=TCONS_00034971|Name=TCONS_00034971|organism=Clytia hemisphaerica|type=transcript|length=1320bp|location=Sequence derived from alignment at sc0001236:50962..52281 (Clytia hemisphaerica)
CAgtattttaacctctacaaGCCGATGTGACCGtgtcattattttttcaa
ttttcgggattccgggatttggccaaaattttgacAGTATTTTGAACTCC
TACAAACTTCCTTCCCTATATTGGGCATGCAGAAGTAGGTTATATATATA
TCATTGCACAAAAGGGACCAGGAAATCTCATCACAATTTAATAAATGTAA
CATATATACTTCATGTCAGGATATAAAAGAACCATGGCATTGCAGATTTA
ATGGTTTTGAATGAGTCCCCTAAGCGGTTCTCGTGACTTTGTtctagcgt
gattacgtgatttggaatttttttccgtgattgcgtgatcaaaACATGAT
CTTGATGCGTGATTTAGACTTTTTtaaagggatgcgtgattatccaattt
ttttgctgattttcgtgatcgtgattgcCAAAAAATTGCCTTACCGCTGG
GGGGCTCTTGAATGGTAGACCGAATGAATGATTCTGAGTCTGACTGATGA
CCCACACATACGACATTTACGAAAGGTATTTAAATATGTTCATTACAGAG
AGCAATTACTCCCATAAGAGGGAcaataagaaaagaaatattctCAGACA
TTAATCTTGAGGAACTTTTGTAGCCGCCGTTGCATAGAAGTCTTATGTCG
TAGACTTAAAACTTCGAAACTTCTATTTTTGTCAAACTTGACTTAGTGAA
AATTTTACAATGCTTAGCATATATATACTTTAGCATCAACTGCTGAATCT
GAGAATTAAATGGGTGAAGAACAAGCTAGAGATATATATAATATAGGTAT
ATTCATATTTTGTAGTTACGCCTCTCCTGGCTACTATACAACACTGTGTA
GCATACAATCAAAAATGTTAATGTAGTTTCTAAATTGGTAGAATAATGAT
TCGTTAGACGAAAATTGACACGGAAATTTAAATACCGGTCGTGACGAGGC
AAAACAAAGGTCTTAGAATATTGATTAATTAACTCGGTGGAAATTTAGGA
TATCGTTGATATTAAAATGAGAGACATGCTTGAAATCTCTTAATTGGCTT
CCGAATTTgggtgatttttgaaaattattgatgAATTAGATGGATAACAG
CCTGTATAACTCTCCGGAATGGATAACCTGCTCAACACGGAAATTCTTTA
GTCCCTCTGATTAGCTTTAAATTGTTTTACTGTTAAGGCTACTTGGGCTG
ATGTCTGGGTTACGTAATTGTTGACGCACGCTTAAACATAGCGTAATTAA
ATCGGGCGTTAGAATGGCGGTACTCCTCTCGTCTTGAAAAGCTCTGACTT
AACCCAATATCTTATTTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00034971-exon-sc0001236-1491911889:50962..52281 | TCONS_00034971-exon-sc0001236-1491911889:50962..52281 | Clytia hemisphaerica | exon |
| TCONS_00034971-exon-sc0001236-1510915933:50962..52281 | TCONS_00034971-exon-sc0001236-1510915933:50962..52281 | Clytia hemisphaerica | exon |
| TCONS_00034971-exon-sc0001236-1575043694:50962..52281 | TCONS_00034971-exon-sc0001236-1575043694:50962..52281 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001236 | supercontig | sc0001236:50962..52281 . |
Blast
The following BLAST results are available for this feature:
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