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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00034955 ID=TCONS_00034955|Name=TCONS_00034955|organism=Clytia hemisphaerica|type=transcript|length=718bp
TTCGCCTTCCAACTCTTTGATTCTAGACTTGAGAAGATCCACTTCTGTTT
GTTTAAGCGGACAGAAGTAACAAGGTTTAGgtttttgtccaaaatatcTG
CTAGATTTTGCTGGTTTAGGTAAAAGGGAGTTCTCGTCATCACTTACATC
CTCACTAGTTCTAATTGGGCTACTGCTTGGTCCATGGTAGCATGGACGCT
TGGCGGGTTGCTTACCAGAGCAACGTTGGGACTTGCCAGAATTTGAATCA
GAATTGGGTGTAGAACTTTGTTCATCAGCAGGCTGTTTACTACTTGTTGT
TCCGGAGCGACGTTCCTTGGACTTAACATTGGAATCAGAATTGGGTGTAA
AAGTTTGTTCATCAGCAGGCTGTTTACTACTTGTTGTTCCAGAGCGACGT
TCCTTGGACTTAACATTGGAATAGGAATTGGGTGTAGAAGTTTGTTCATC
AGCAGGCTGTTTACTACTTGTTGTTCCAGAGCGACGTTCTTTGGACTTAA
CATTGGAATAGGAATTGGGTGTAGAAGTTTGTTCATCAGCAGGCTGTTTA
CCTGTTGTTCCATGGGACCATGGACGCTTATCTGGTTGTTCTATAGAATT
GCCATCATCAGAATCATCAGAATCAATCTTGCTAACACTGCATTCAGAAT
TATCATCAATGTGAAAATCGGCCGAATCattaaatctttgaaaaaataca
gtTTCTTTCTTTCGCAAT Run BLAST on NCBI protein sequence of TCONS_00034955-protein >TCONS_00034955-protein ID=TCONS_00034955-protein|Name=TCONS_00034955-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
LRKKETVFFQRFNDSADFHIDDNSECSVSKIDSDDSDDGNSIEQPDKRPW
SHGTTGKQPADEQTSTPNSYSNVKSKERRSGTTSSKQPADEQTSTPNSYS
NVKSKERRSGTTSSKQPADEQTFTPNSDSNVKSKERRSGTTSSKQPADEQ
SSTPNSDSNSGKSQRCSGKQPAKRPCYHGPSSSPIRTSEDVSDDENSLLP
KPAKSSRYFGQKPKPCYFCPLKQTEVDLLKSRIKELEGE Run BLAST on NCBI transcript from alignment at sc0001235:27671..28388 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00034955 ID=TCONS_00034955|Name=TCONS_00034955|organism=Clytia hemisphaerica|type=transcript|length=718bp|location=Sequence derived from alignment at sc0001235:27671..28388 (Clytia hemisphaerica)
ATTGCGAAAGAAAGAAactgtattttttcaaagatttaatGATTCGGCCG
ATTTTCACATTGATGATAATTCTGAATGCAGTGTTAGCAAGATTGATTCT
GATGATTCTGATGATGGCAATTCTATAGAACAACCAGATAAGCGTCCATG
GTCCCATGGAACAACAGGTAAACAGCCTGCTGATGAACAAACTTCTACAC
CCAATTCCTATTCCAATGTTAAGTCCAAAGAACGTCGCTCTGGAACAACA
AGTAGTAAACAGCCTGCTGATGAACAAACTTCTACACCCAATTCCTATTC
CAATGTTAAGTCCAAGGAACGTCGCTCTGGAACAACAAGTAGTAAACAGC
CTGCTGATGAACAAACTTTTACACCCAATTCTGATTCCAATGTTAAGTCC
AAGGAACGTCGCTCCGGAACAACAAGTAGTAAACAGCCTGCTGATGAACA
AAGTTCTACACCCAATTCTGATTCAAATTCTGGCAAGTCCCAACGTTGCT
CTGGTAAGCAACCCGCCAAGCGTCCATGCTACCATGGACCAAGCAGTAGC
CCAATTAGAACTAGTGAGGATGTAAGTGATGACGAGAACTCCCTTTTACC
TAAACCAGCAAAATCTAGCAgatattttggacaaaaacCTAAACCTTGTT
ACTTCTGTCCGCTTAAACAAACAGAAGTGGATCTTCTCAAGTCTAGAATC
AAAGAGTTGGAAGGCGAA Coding sequence (CDS) from alignment at sc0001235:27671..28388 >TCONS_00034955 ID=TCONS_00034955|Name=TCONS_00034955|organism=Clytia hemisphaerica|type=CDS|length=717bp|location=Sequence derived from alignment at sc0001235:27671..28388 (Clytia hemisphaerica)
TTGCGAAAGAAAGAAactgtattttttcaaagatttaatGATTCGGCCGA
TTTTCACATTGATGATAATTCTGAATGCAGTGTTAGCAAGATTGATTCTG
ATGATTCTGATGATGGCAATTCTATAGAACAACCAGATAAGCGTCCATGG
TCCCATGGAACAACAGGTAAACAGCCTGCTGATGAACAAACTTCTACACC
CAATTCCTATTCCAATGTTAAGTCCAAAGAACGTCGCTCTGGAACAACAA
GTAGTAAACAGCCTGCTGATGAACAAACTTCTACACCCAATTCCTATTCC
AATGTTAAGTCCAAGGAACGTCGCTCTGGAACAACAAGTAGTAAACAGCC
TGCTGATGAACAAACTTTTACACCCAATTCTGATTCCAATGTTAAGTCCA
AGGAACGTCGCTCCGGAACAACAAGTAGTAAACAGCCTGCTGATGAACAA
AGTTCTACACCCAATTCTGATTCAAATTCTGGCAAGTCCCAACGTTGCTC
TGGTAAGCAACCCGCCAAGCGTCCATGCTACCATGGACCAAGCAGTAGCC
CAATTAGAACTAGTGAGGATGTAAGTGATGACGAGAACTCCCTTTTACCT
AAACCAGCAAAATCTAGCAgatattttggacaaaaacCTAAACCTTGTTA
CTTCTGTCCGCTTAAACAAACAGAAGTGGATCTTCTCAAGTCTAGAATCA
AAGAGTTGGAAGGCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00034955-exon-sc0001235-1491911889:27671..28388 | TCONS_00034955-exon-sc0001235-1491911889:27671..28388 | Clytia hemisphaerica | exon |
| TCONS_00034955-exon-sc0001235-1510915933:27671..28388 | TCONS_00034955-exon-sc0001235-1510915933:27671..28388 | Clytia hemisphaerica | exon |
| TCONS_00034955-exon-sc0001235-1575043694:27671..28388 | TCONS_00034955-exon-sc0001235-1575043694:27671..28388 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001235 | supercontig | sc0001235:27671..28388 . |
Blast
The following BLAST results are available for this feature:
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