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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00034875 ID=TCONS_00034875|Name=TCONS_00034875|organism=Clytia hemisphaerica|type=transcript|length=381bp
CCGGCTTTGACGATGTCGAACTTCCAGATGCCACACTACAAGTGTTTCGT
CCTTACGTTAACAAACCACATTTTGCGCCTGGTTACCTGTCTACAAGAAC
TGGCAACACAGCTATTGGTTCTCTGGTTCTCTACGTCAGAGGAGCTGTCA
GATACAACTATATCATGCAGTCACACGTGAAACCACTTCATCAGAAAGTT
GAAAAGTTGGATATGGTGTCCGAAAAAAATCTGGCATGGAAAAGAAATTG
AAGgatttgaaagTACGCTTATGTGCACTTGGCGAGAATTTTGAGGACGC
ATGCGTTGAAAGGTCGCAACAAAAAGAATCCGTCGACCATTTGAATCAAT
TGCTGGATAAAGAAACGGAATTTGATAAGGT Run BLAST on NCBI transcript from alignment at sc0001229:69556..71558+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00034875 ID=TCONS_00034875|Name=TCONS_00034875|organism=Clytia hemisphaerica|type=transcript|length=2003bp|location=Sequence derived from alignment at sc0001229:69556..71558+ (Clytia hemisphaerica)
CCGGCTTTGACGATGTCGAACTTCCAGATGCCACACTACAAGTGTTTCGT
CCTTACGTTAACAAACCACATTTTGCGCCTGGTTACCTGTCTACAAGAAC
TGGCAACACAGCTATTGGTTCTCTGGTTCTCTACGTCAGAGGAGCTGTCA
GGTAAGGCCACGTGTCATTCGCGAgttaatagcgaggttaagcaagtgtt
tattttgaccgtaaagtgcgatatcgtaggcctgtatacataagatttca
ctttGTTTTGGCAAGTTTATGTCCAGGCCTACGGTATTGCACTctacggt
caaaataaacccgtgcttaacctcgctaatgtCAGGTACGTTTTCTGCGG
TAGAAACGGTtagcttttgatttttctgattcCTGACTGACTGAAGACGA
CGGAAAATTAGCCCCTTTTACTGGAGGATATTACAAACTAAGTCTCAAAT
AATCAAGTCCTCAAAAGAGATATTAAGCAACAAATAGACTAATAAATGTA
TGGATATTTATTTACTCTTCTCCTACTCGATCAACTTTTTTCTTATCAGC
TTTTAAATCACAAATATATGAAAAACTAGATAGAACTTTTCACAGCCCGA
GGCagctgaagcaaaataatgcaccATCTTTGCTAAAGTAGACTGCTGTT
GGTAGAAACCTTGGTTTTTACTGCtgaagtattttgtcactgcgcaagca
aaatttaaaatggtaCATATATTGTGCTTCAGTTAGGGCCTGGGGAGTGT
ATCTTGACGCTTCACCTAGTGTTCCATATAAGATATACGTGACTGTCATA
CCTCTGATATACACATTAAGCTCGAATtccttattttctttctttactaT
AGATACAACTATATCATGCAGTCACACGTGAAACCACTTCATCAGAAAGT
TGAAAAGTTGGATATGGTGTCCGAAAAAAATCTGGCATGGAAAAGAAATT
GAAGGTATGCgaataaacttttttaaattcccCTTCTGATAATCAGTTTT
TGAATAAAAGTTGATGTTTTGACCGTGTTTGTCAAATAACGGTTGTgata
cttaaaggttttgttttcaaataagagtgataacgtttgcttactcatca
tttttaatttacaagctttttcgcattggattgagacgaatgtggagcaa
aattggtcagaaagaggaatagaaaaacattttttgcttatatcagaaTA
GTAACAGTAGGAAGACTaccgatatgaaatatgtgtctgatatgaaacag
gaacacttatgtaaaaacaaacctttaattACACTAGTAAATACGACTTT
CATTTTTGTTGAgggttttcaaatatttctatgAGCAAGACATTATTCCT
AGTCTAATAGACAAATGATTATCAAACAGTTGGGTTTGGGCCCTGAATTa
agccaaataatttttttaaattacgtaaaggaaaaatgttttaaatagtC
TAACTACaataagcaaccaggttgctaaggctTCAAGCcctcaaattatt
attttttaaatcccgtaaagtaaaagctttttagataatctaaccatggc
aaacgatagcccttgacccaataaacataaatatggtataatattaggGG
TTTTCAAAGCAAATTATTTCAAagaatgagctagaatgctaagtaGTGCC
AAGCCCTGACCCaagccctgacccgaaaattgcagttgctaattaaaaaa
aaaatttctatggCAAATGATAGCTCTGGAACCAATAAGCATAAAATATG
ACATGACAATTAGTATTTGGGGTGGGCATTAACGAGCAACCTCAGAGCAA
AAGCTAATAAAccagttgcttataaaaaagattacgtACGATGTTTAgga
ttttgtgtttgttttattttggtaggatttgaaagTACGCTTATGTGCAC
TTGGCGAGAATTTTGAGGACGCATGCGTTGAAAGGTCGCAACAAAAAGAA
TCCGTCGACCATTTGAATCAATTGCTGGATAAAGAAACGGAATTTGATAA
GGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00034875-exon-sc0001229-1491911889:69556..69706 | TCONS_00034875-exon-sc0001229-1491911889:69556..69706 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1510915933:69556..69706 | TCONS_00034875-exon-sc0001229-1510915933:69556..69706 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1575043694:69556..69706 | TCONS_00034875-exon-sc0001229-1575043694:69556..69706 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1491911889:70408..70509 | TCONS_00034875-exon-sc0001229-1491911889:70408..70509 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1510915933:70408..70509 | TCONS_00034875-exon-sc0001229-1510915933:70408..70509 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1575043694:70408..70509 | TCONS_00034875-exon-sc0001229-1575043694:70408..70509 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1491911889:71431..71558 | TCONS_00034875-exon-sc0001229-1491911889:71431..71558 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1510915933:71431..71558 | TCONS_00034875-exon-sc0001229-1510915933:71431..71558 | Clytia hemisphaerica | exon |
| TCONS_00034875-exon-sc0001229-1575043694:71431..71558 | TCONS_00034875-exon-sc0001229-1575043694:71431..71558 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001229 | supercontig | sc0001229:69556..71558 + |
Blast
The following BLAST results are available for this feature:
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