TCONS_00034768 (transcript) - C. hemisphaerica

Overview
NameTCONS_00034768
Unique NameTCONS_00034768
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length448

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00034768 ID=TCONS_00034768|Name=TCONS_00034768|organism=Clytia hemisphaerica|type=transcript|length=448bp
ttagaaaatataatacAGAAAGATATTGATTATTGTTATCTTTACGtgta
tgaaaatgtaaaaataataaattcttaTATTATCTTAATTGATTATTGCT
CCGTGTAAGAGGGCCTTAAGAGTTATAAGTTTGTTTCtcataaagaaaac
aattacaAAAGTAATATATATGTTCCTGATATACATTGTAAAACTGTCAA
TACCAATCACTAAGTTTCATTCAAGAGTTATAAGCTTGTTTCTTATGAAG
AAAAAGCttactaaaattcaaaatgttgatTATCTGTATTGCCCCGATTT
GACTGTCAATACCGATCACCAAAAGtagacccacgcaaaaattttgaccc
acgcaaagaATATGACCcatgcaaaaaatatgacccacgcaaaaaataat
gacccacgcaaaaaagatgacccacgcaaaaaatattttgacccacgc
Run BLAST on NCBI

transcript from alignment at sc0001216:307..754

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00034768 ID=TCONS_00034768|Name=TCONS_00034768|organism=Clytia hemisphaerica|type=transcript|length=448bp|location=Sequence derived from alignment at sc0001216:307..754 (Clytia hemisphaerica)
gcgtgggtcaaaatattttttgcgtgggtcatcttttttgcgtgggtcat
tattttttgcgtgggtcatattttttgcatgGGTCATATtctttgcgtgg
gtcaaaatttttgcgtgggtctaCTTTTGGTGATCGGTATTGACAGTCAA
ATCGGGGCAATACAGATAatcaacattttgaattttagtaaGCTTTTTCT
TCATAAGAAACAAGCTTATAACTCTTGAATGAAACTTAGTGATTGGTATT
GACAGTTTTACAATGTATATCAGGAACATATATATTACTTTtgtaattgt
tttctttatgaGAAACAAACTTATAACTCTTAAGGCCCTCTTACACGGAG
CAATAATCAATTAAGATAATAtaagaatttattatttttacattttcata
caCGTAAAGATAACAATAATCAATATCTTTCTgtattatattttctaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020213XLOC_020213Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034768-exon-sc0001216-1491911889:307..754TCONS_00034768-exon-sc0001216-1491911889:307..754Clytia hemisphaericaexon
TCONS_00034768-exon-sc0001216-1510915933:307..754TCONS_00034768-exon-sc0001216-1510915933:307..754Clytia hemisphaericaexon
TCONS_00034768-exon-sc0001216-1575043694:307..754TCONS_00034768-exon-sc0001216-1575043694:307..754Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001216supercontigsc0001216:307..754 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.965309	0.579019	0.567083	0.493303	0.90148	1.03505	9.48523	10.157	10.4681	14.6862	8.68673	6.42602	0.0987244	0.543585	0.689536	0.188442	0.22287	0.698364	0	0	1.44401	0.906634	0.988067	1.06066	0.675345	1.05688	1.45927	1.13133	1.01428	0.8886
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00034768 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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