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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00034764 ID=TCONS_00034764|Name=TCONS_00034764|organism=Clytia hemisphaerica|type=transcript|length=1673bp
ATTCACTAAGAAGAATTCTCTTGACCTCTTTACCACCCTGTTTACTTGAG
TTCGGTTGGAGTAAAGTAACCCCGATTTTGGGTTCAGGGCTCAATATAGC
GAGCCAGAGCATAGGGAAAAGCGAGGGCGAGATTACAcgctatttttata
agaatggtgtttttacattttattatgaatattcttaacttttttgaaaa
attatcttaaaatAATCTTAAGGCATTCTTAGGGAATTTTCAAGTCAAAT
AATATAATCCAACCTCAAATAATAAAATACGAAAGAGGGTTTATGGCAAT
ATCCGTAAATAATACTATTTCAGTGTGTTACAAAACCCAAAAACTCTTGA
AATGTTAGTGTAAATTAGGAGCAGAGTTAGACTCGAAGAAagtttaaaat
agaaattttgggCTAGCACAAAGAAATTCATGATGGCGCTATTCTTAGGA
TATTTTCAATCTTTgagccaatttcatcatgaatactTTTATAACATATA
TtcttgtaaaagaaaaaaaatcgtgtaGACAGACAATATACATCCTAAAT
CGGGGGTCATTTCTGGGAAATTTTGACAGATCGAATCGAATCAGATTATG
AGaagtaaaataaaatgatattCTTATTACCCCTATCTGTAGTGATTTCC
TTCACAATATTGAAGAGGCCCAGATGTGATTTACATGTCTCCTCCCTCCT
CTTATTCAAGAAGacgttttaaaacaaaagaatatatTCAGTTTATTATG
TAATAAAGAGATTACTGACATTTCTTTGGCGTTAATATGAACAGCTGCGT
TTTCAGTGTGATGTACGCTTTCAATAGAAGCAAAAGAAATAGAGAAAAAG
CAGATTAAAATTTTCCCACGGTTGTAAAGTTACgtatccattgttttaga
aaataattttgacactttttaaaatagttttataaattattttatagCAA
GAGGGGGAATTCCCTGCATATAAAAGAGTGAAAGATGGCAAAGAGTGAAA
GacagaaaagttgaaatttgagaTGAACTTCAAATAAATTAACTTTCTCA
AAACATGCATGACCTACCCATTACCTAATGAGGGTCTCCTAGGTCAGTTC
CCCAGAAATTTTAGACTGCCTGGTTGTCAAATCTCCcctctgaaaatgaa
aaaatcctttTCCCACCCCTTTTGCTCTTTCCCTCCCCAgataagttgaa
attttttctctCCCCCTTTTCACGATTCCGAGCAATTAATTTTTACACAC
CTTTGCACACCAAAATGGGCCAAAATGTACttctttagaaaataaattgt
taATCTAAATAAAAATCCTAGTTTAAATGTTATAAAAGATCGAAAGAATG
TCAAATGATAAAATAACGAGAGAAATATCAGCCATAATGCAAAAGTGAAA
CGACTTTAGCCATTTCACTTTTCTGCTAAAAGGTTGAAAAGTTCTTTCCC
CCAGAAAAATTTTGTTACCCCTTTTTAAAATCCCCCATGgatttccattt
tttcttttgcccccccccctttttggaaactttttgaaaaactcaCAGTA
AGCGAGGAGTAAATCACTacgcatttttttataagcattacaTAAATCAA
GATGAGCCTCgtgattcttaatttttcacgAATTTGATCCCTAAAAAATT
CTTAAGTTTCGAagactggaaaa Run BLAST on NCBI transcript from alignment at sc0001215:68681..70353 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00034764 ID=TCONS_00034764|Name=TCONS_00034764|organism=Clytia hemisphaerica|type=transcript|length=1673bp|location=Sequence derived from alignment at sc0001215:68681..70353 (Clytia hemisphaerica)
ttttccagtctTCGAAACTTAAGAATTTTTTAGGGATCAAATTcgtgaaa
aattaagaatcacGAGGCTCATCTTGATTTAtgtaatgcttataaaaaaa
tgcgtAGTGATTTACTCCTCGCTTACTGtgagtttttcaaaaagtttcca
aaaaggggggggggcaaaagaaaaaatggaaatcCATGGGGGATTTTAAA
AAGGGGTAACAAAATTTTTCTGGGGGAAAGAACTTTTCAACCTTTTAGCA
GAAAAGTGAAATGGCTAAAGTCGTTTCACTTTTGCATTATGGCTGATATT
TCTCTCGTTATTTTATCATTTGACATTCTTTCGATCTTTTATAACATTTA
AACTAGGATTTTTATTTAGATtaacaatttattttctaaagaaGTACATT
TTGGCCCATTTTGGTGTGCAAAGGTGTGTAAAAATTAATTGCTCGGAATC
GTGAAAAGGGGGagagaaaaaatttcaacttatcTGGGGAGGGAAAGAGC
AAAAGGGGTGGGAaaaggattttttcattttcagaggGGAGATTTGACAA
CCAGGCAGTCTAAAATTTCTGGGGAACTGACCTAGGAGACCCTCATTAGG
TAATGGGTAGGTCATGCATGTTTTGAGAAAGTTAATTTATTTGAAGTTCA
tctcaaatttcaacttttctgtCTTTCACTCTTTGCCATCTTTCACTCTT
TTATATGCAGGGAATTCCCCCTCTTGctataaaataatttataaaactat
tttaaaaagtgtcaaaattattttctaaaacaatggatacGTAACTTTAC
AACCGTGGGAAAATTTTAATCTGCTTTTTCTCTATTTCTTTTGCTTCTAT
TGAAAGCGTACATCACACTGAAAACGCAGCTGTTCATATTAACGCCAAAG
AAATGTCAGTAATCTCTTTATTACATAATAAACTGAatatattcttttgt
tttaaaacgtCTTCTTGAATAAGAGGAGGGAGGAGACATGTAAATCACAT
CTGGGCCTCTTCAATATTGTGAAGGAAATCACTACAGATAGGGGTAATAA
GaatatcattttattttacttCTCATAATCTGATTCGATTCGATCTGTCA
AAATTTCCCAGAAATGACCCCCGATTTAGGATGTATATTGTCTGTCtaca
cgattttttttcttttacaagaATATATGTTATAAAagtattcatgatga
aattggctcAAAGATTGAAAATATCCTAAGAATAGCGCCATCATGAATTT
CTTTGTGCTAGcccaaaatttctattttaaactTTCTTCGAGTCTAACTC
TGCTCCTAATTTACACTAACATTTCAAGAGTTTTTGGGTTTTGTAACACA
CTGAAATAGTATTATTTACGGATATTGCCATAAACCCTCTTTCGTATTTT
ATTATTTGAGGTTGGATTATATTATTTGACTTGAAAATTCCCTAAGAATG
CCTTAAGATTattttaagataatttttcaaaaaagttaagaatattcata
ataaaatgtaaaaacaccattcttataaaaatagcgTGTAATCTCGCCCT
CGCTTTTCCCTATGCTCTGGCTCGCTATATTGAGCCCTGAACCCAAAATC
GGGGTTACTTTACTCCAACCGAACTCAAGTAAACAGGGTGGTAAAGAGGT
CAAGAGAATTCTTCTTAGTGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00034764-exon-sc0001215-1491911889:68681..70353 | TCONS_00034764-exon-sc0001215-1491911889:68681..70353 | Clytia hemisphaerica | exon |
| TCONS_00034764-exon-sc0001215-1510915933:68681..70353 | TCONS_00034764-exon-sc0001215-1510915933:68681..70353 | Clytia hemisphaerica | exon |
| TCONS_00034764-exon-sc0001215-1575043694:68681..70353 | TCONS_00034764-exon-sc0001215-1575043694:68681..70353 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001215 | supercontig | sc0001215:68681..70353 . |
Blast
The following BLAST results are available for this feature:
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