TCONS_00034761 (transcript) - C. hemisphaerica

Overview
NameTCONS_00034761
Unique NameTCONS_00034761
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00034761 ID=TCONS_00034761|Name=TCONS_00034761|organism=Clytia hemisphaerica|type=transcript|length=287bp
NTATCAGATTTTAAAGGAACCACTTTCAGAGGACCATAAATCACATCAGC
TAAGTCAAACAGTGACACATCTGGCAAATGAGCTGGTGTATCTTCAAGAA
TGGTACCAGAGCCTACTTTGGGCTTCAAGCAACTAACTTCCAATTTCTCA
ACAAGCCCGTTTTCATCAGCCAAGAAACGTTTGAAGATTTTACCAACATA
CAGCTTGCTAATGCGCTTTGTACAATACACTACACCATACCACTTCCCCA
AGAGAGAATCCTCAGTCACTGGAGGGCTGAGTGTTTT
Run BLAST on NCBI

transcript from alignment at sc0001215:7930..8216

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00034761 ID=TCONS_00034761|Name=TCONS_00034761|organism=Clytia hemisphaerica|type=transcript|length=287bp|location=Sequence derived from alignment at sc0001215:7930..8216 (Clytia hemisphaerica)
AAAACACTCAGCCCTCCAGTGACTGAGGATTCTCTCTTGGGGAAGTGGTA
TGGTGTAGTGTATTGTACAAAGCGCATTAGCAAGCTGTATGTTGGTAAAA
TCTTCAAACGTTTCTTGGCTGATGAAAACGGGCTTGTTGAGAAATTGGAA
GTTAGTTGCTTGAAGCCCAAAGTAGGCTCTGGTACCATTCTTGAAGATAC
ACCAGCTCATTTGCCAGATGTGTCACTGTTTGACTTAGCTGATGTGATTT
ATGGTCCTCTGAAAGTGGTTCCTTTAAAATCTGATAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020206XLOC_020206Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034761-exon-sc0001215-1491911889:7930..8216TCONS_00034761-exon-sc0001215-1491911889:7930..8216Clytia hemisphaericaexon
TCONS_00034761-exon-sc0001215-1510915933:7930..8216TCONS_00034761-exon-sc0001215-1510915933:7930..8216Clytia hemisphaericaexon
TCONS_00034761-exon-sc0001215-1575043694:7930..8216TCONS_00034761-exon-sc0001215-1575043694:7930..8216Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001215supercontigsc0001215:7930..8216 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.943914	0.793538	4.16417	4.70266	1.5803	0.889332	0.795645	0	1.52362	3.42241	1.91239	1.29069	1.44047	1.02642	3.08443	0.990826	3.92178	1.90137	0.664191	2.31457	2.56833	0.361077	0.750278	1.09767	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00034761 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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