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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00034752 ID=TCONS_00034752|Name=TCONS_00034752|organism=Clytia hemisphaerica|type=transcript|length=2546bp
CATCTCGCAGGAGGAGTTCATAATGGGGCGCGTAAAGCGCACGAATAAAT
GTTAACAAAAGGTAATCCACGAAGGAGTTTACGAATGGGGCGCGAAAGCa
ccaaaataacaaataaaataaacaacaacTGGCGATGGATGAAGACAACA
ATGAAACATACAATTGGGAACTTGATTAAAACCCATAATTTACCTCGTTG
TcgcattttctttaaaacacgGTCGATAACAATCCGCGATTTGATTAATA
ACACTTACGACTCGGCAGATTATTCAAGTGATCCTGATGATGACGACCTT
CCACCATCCCTTCCACCATCCCTTCCACCATCCCTTCCACCAAGGAGGAA
TATGTCAACATCATCTACATCCACACCACACTTTCCTGCTCCAACAACCT
CCACACCAAGCTCTACAACAACCCCCACCGTTAGTTCAATTGATTTGACA
AATATATCTTATAATAGAGAAGATGTTACACCAGTGGAACAAGAAACTAG
CATCTCATCAGAGAGAGAAGAAAACCCATCAGAAGAAAATGAGTATACAG
CCACCACACAACAAGAGCAACATGAAGAAATGAGATTAGCACGCTTGGCA
CGAGTTGAGCCAGACTTGTCATTAGAAGATGACCATATTGTAATTGCTGT
CAGACATATCGAATTGAATAAAACATTcacaagatttttcaaaccaacat
CCTTGATGTTAGCTGTCCATGATTGGGTTGGAAGCATATCTTCCACCCCA
GAGCATTTCCAATTAATCGATTGTAACAGAAATATTGTCGATTTGTCTCA
AGCTCTTGTTGCTGGTGTCTATAATATGAAAAGGGTCGCCCAACCTGTTA
TAATGTCGCCATCTGGCACCATCGCTTTCAGAGGTTTTGGTGTCAATAAC
AATATATCTTCTGTTGAGGATGAGAATGGAATCGACAGCAGTACACAAAG
AAATGGAAATCTCAATATTGTAGATCATGAAAAGGCTTATGAAAAAGTTA
ACGATTTCCGACAAGTTGCCCTATCAGAATTATCCAACGATTCAGTTAAA
TGTGAAGTAGGAATGCAAAGTATTGTTGACGATCTATTAACAATCTATAA
AGTAAATCAAATTGACAACTACAAAACAATTGATATGACTATTAAAGGAG
AGGAAGACGCAGTTGGCCATGGTGTTCTGAAAGACGCATTCTCGGAATTT
TTCGACAGGGTGAACGACTTGGATGTCTACGACCCTGATGAGCTTGAGAT
AATAGGTAAAGTCTTTACCCATGCATTTCTGTTGTTTGGAATGTTTCCTT
TTACAATTCCAAAAGCTTCCATCAAATACATGCTATTCAATTCGGTAACT
TCTTCAGTCATTTTTTCAATCTTTACCGGAAAAAGAAGAGCGGAtgataa
aagattttgaaatggGTCACAATGACATAGAAACTGATGCAATAGTAGAT
ATTTTGTGTTTACACAAGGTTACCGCAATTCCATCCAGCTCAAATGTTAT
GAGACTTTGTTTGAAAGCTGCACGCAAATGTCTTGTACAAGAAtgcttct
ttgtttttcaagcTTTAAAGGAAGGAATGAAATTTTTCTCCTCCTTTACT
ACTGAAATGCTTGATTCAATCTACACATGTACAACCCCAACtccatccaa
aattttgaaatcccTTGAggttaatgaaaaaaatcaaaccgAAGCAAAAG
TAGCCACCTTTTTGTATCGCTTTATTCGTATGTGTAATGTTGAAGAGTTG
CGCGTTTTTCTCCGTTTCTGCACTGCTTCATCATCATTTTTACCTAACAC
TGTCATAAAGGTCGCGTTTGTAAATGCTCCTGTTGACCATATGGCACCGG
CTTCAAAGACATGCTTTTCAATTTTGTATTTACCACGTCAGTACAccaaa
tttgatcaatttcGAAACAACTTAAATACCTACGTTTTGAATCCAAATAC
ACGAGAGGCATGGGCTTTGCATGATACAATGGACAGTTGATTTTGGTGAA
CATGTCctgtttataatttttctttattttatactGCCTGTTGCCTTTGG
AGATTCTTTGAATCTTGTCTAATGAAGTAGAGTTATGATCGAGGCGAAAA
AAAAGCTCTAGGTTAAATACTGACCACTGTTTCATCGGTTGAGCTATTTC
AATTCTACAATATGATAATTCGTTCTTTTGTTTACTAATTTTACAAGAAa
cttcttttgtatttttgccTTTTGATTTAGTACTTTAAATATGTTTAAAC
TTTatagttatttttttgtttttaacatCGAACCATTTGTTAAGCCGGAC
ATGCTCAAACCAGCCTATGCCATACCAGCCTATgtcatttttatttgtta
ataTATATTTACTTTGTTAGAAATTTATTTCATACATTTACTGTTTTTGA
CTCAGGGTAGGGTAAGCACTTGCAACATATTTTGAGACCATCATGTCAGT
TATTTGATTTTACGCTTTTATTTGCACGTGCTTAATACAAGAAGCTTCTT
TTGTATCCTTGCCTTTTGATTTACTTTAAATctgtttaaacttttt Run BLAST on NCBI protein sequence of TCONS_00034752-protein >TCONS_00034752-protein ID=TCONS_00034752-protein|Name=TCONS_00034752-protein|organism=Clytia hemisphaerica|type=polypeptide|length=453bp
MLTKGNPRRSLRMGRESTKITNKINNNWRWMKTTMKHTIGNLIKTHNLPR
CRIFFKTRSITIRDLINNTYDSADYSSDPDDDDLPPSLPPSLPPSLPPRR
NMSTSSTSTPHFPAPTTSTPSSTTTPTVSSIDLTNISYNREDVTPVEQET
SISSEREENPSEENEYTATTQQEQHEEMRLARLARVEPDLSLEDDHIVIA
VRHIELNKTFTRFFKPTSLMLAVHDWVGSISSTPEHFQLIDCNRNIVDLS
QALVAGVYNMKRVAQPVIMSPSGTIAFRGFGVNNNISSVEDENGIDSSTQ
RNGNLNIVDHEKAYEKVNDFRQVALSELSNDSVKCEVGMQSIVDDLLTIY
KVNQIDNYKTIDMTIKGEEDAVGHGVLKDAFSEFFDRVNDLDVYDPDELE
IIGKVFTHAFLLFGMFPFTIPKASIKYMLFNSVTSSVIFSIFTGKRRADD
KRF Run BLAST on NCBI transcript from alignment at sc0001213:63207..65752 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00034752 ID=TCONS_00034752|Name=TCONS_00034752|organism=Clytia hemisphaerica|type=transcript|length=2546bp|location=Sequence derived from alignment at sc0001213:63207..65752 (Clytia hemisphaerica)
aaaaagtttaaacagATTTAAAGTAAATCAAAAGGCAAGGATACAAAAGA
AGCTTCTTGTATTAAGCACGTGCAAATAAAAGCGTAAAATCAAATAACTG
ACATGATGGTCTCAAAATATGTTGCAAGTGCTTACCCTACCCTGAGTCAA
AAACAGTAAATGTATGAAATAAATTTCTAACAAAGTAAATATAtattaac
aaataaaaatgacATAGGCTGGTATGGCATAGGCTGGTTTGAGCATGTCC
GGCTTAACAAATGGTTCGatgttaaaaacaaaaaaataactatAAAGTTT
AAACATATTTAAAGTACTAAATCAAAAggcaaaaatacaaaagaagtTTC
TTGTAAAATTAGTAAACAAAAGAACGAATTATCATATTGTAGAATTGAAA
TAGCTCAACCGATGAAACAGTGGTCAGTATTTAACCTAGAGCTTTTTTTT
CGCCTCGATCATAACTCTACTTCATTAGACAAGATTCAAAGAATCTCCAA
AGGCAACAGGCagtataaaataaagaaaaattataaacagGACATGTTCA
CCAAAATCAACTGTCCATTGTATCATGCAAAGCCCATGCCTCTCGTGTAT
TTGGATTCAAAACGTAGGTATTTAAGTTGTTTCgaaattgatcaaatttg
gTGTACTGACGTGGTAAATACAAAATTGAAAAGCATGTCTTTGAAGCCGG
TGCCATATGGTCAACAGGAGCATTTACAAACGCGACCTTTATGACAGTGT
TAGGTAAAAATGATGATGAAGCAGTGCAGAAACGGAGAAAAACGCGCAAC
TCTTCAACATTACACATACGAATAAAGCGATACAAAAAGGTGGCTACTTT
TGCTTcggtttgatttttttcattaaccTCAAgggatttcaaaattttgg
atggaGTTGGGGTTGTACATGTGTAGATTGAATCAAGCATTTCAGTAGTA
AAGGAGGAGAAAAATTTCATTCCTTCCTTTAAAgcttgaaaaacaaagaa
gcaTTCTTGTACAAGACATTTGCGTGCAGCTTTCAAACAAAGTCTCATAA
CATTTGAGCTGGATGGAATTGCGGTAACCTTGTGTAAACACAAAATATCT
ACTATTGCATCAGTTTCTATGTCATTGTGACccatttcaaaatcttttat
caTCCGCTCTTCTTTTTCCGGTAAAGATTGAAAAAATGACTGAAGAAGTT
ACCGAATTGAATAGCATGTATTTGATGGAAGCTTTTGGAATTGTAAAAGG
AAACATTCCAAACAACAGAAATGCATGGGTAAAGACTTTACCTATTATCT
CAAGCTCATCAGGGTCGTAGACATCCAAGTCGTTCACCCTGTCGAAAAAT
TCCGAGAATGCGTCTTTCAGAACACCATGGCCAACTGCGTCTTCCTCTCC
TTTAATAGTCATATCAATTGTTTTGTAGTTGTCAATTTGATTTACTTTAT
AGATTGTTAATAGATCGTCAACAATACTTTGCATTCCTACTTCACATTTA
ACTGAATCGTTGGATAATTCTGATAGGGCAACTTGTCGGAAATCGTTAAC
TTTTTCATAAGCCTTTTCATGATCTACAATATTGAGATTTCCATTTCTTT
GTGTACTGCTGTCGATTCCATTCTCATCCTCAACAGAAGATATATTGTTA
TTGACACCAAAACCTCTGAAAGCGATGGTGCCAGATGGCGACATTATAAC
AGGTTGGGCGACCCTTTTCATATTATAGACACCAGCAACAAGAGCTTGAG
ACAAATCGACAATATTTCTGTTACAATCGATTAATTGGAAATGCTCTGGG
GTGGAAGATATGCTTCCAACCCAATCATGGACAGCTAACATCAAGGatgt
tggtttgaaaaatcttgtgAATGTTTTATTCAATTCGATATGTCTGACAG
CAATTACAATATGGTCATCTTCTAATGACAAGTCTGGCTCAACTCGTGCC
AAGCGTGCTAATCTCATTTCTTCATGTTGCTCTTGTTGTGTGGTGGCTGT
ATACTCATTTTCTTCTGATGGGTTTTCTTCTCTCTCTGATGAGATGCTAG
TTTCTTGTTCCACTGGTGTAACATCTTCTCTATTATAAGATATATTTGTC
AAATCAATTGAACTAACGGTGGGGGTTGTTGTAGAGCTTGGTGTGGAGGT
TGTTGGAGCAGGAAAGTGTGGTGTGGATGTAGATGATGTTGACATATTCC
TCCTTGGTGGAAGGGATGGTGGAAGGGATGGTGGAAGGGATGGTGGAAGG
TCGTCATCATCAGGATCACTTGAATAATCTGCCGAGTCGTAAGTGTTATT
AATCAAATCGCGGATTGTTATCGACcgtgttttaaagaaaatgcgACAAC
GAGGTAAATTATGGGTTTTAATCAAGTTCCCAATTGTATGTTTCATTGTT
GTCTTCATCCATCGCCAgttgttgtttattttatttgttattttggtGCT
TTCGCGCCCCATTCGTAAACTCCTTCGTGGATTACCTTTTGTTAACATTT
ATTCGTGCGCTTTACGCGCCCCATTATGAACTCCTCCTGCGAGATG Coding sequence (CDS) from alignment at sc0001213:63207..65752 >TCONS_00034752 ID=TCONS_00034752|Name=TCONS_00034752|organism=Clytia hemisphaerica|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0001213:63207..65752 (Clytia hemisphaerica)
tcaaaatcttttatcaTCCGCTCTTCTTTTTCCGGTAAAGATTGAAAAAA
TGACTGAAGAAGTTACCGAATTGAATAGCATGTATTTGATGGAAGCTTTT
GGAATTGTAAAAGGAAACATTCCAAACAACAGAAATGCATGGGTAAAGAC
TTTACCTATTATCTCAAGCTCATCAGGGTCGTAGACATCCAAGTCGTTCA
CCCTGTCGAAAAATTCCGAGAATGCGTCTTTCAGAACACCATGGCCAACT
GCGTCTTCCTCTCCTTTAATAGTCATATCAATTGTTTTGTAGTTGTCAAT
TTGATTTACTTTATAGATTGTTAATAGATCGTCAACAATACTTTGCATTC
CTACTTCACATTTAACTGAATCGTTGGATAATTCTGATAGGGCAACTTGT
CGGAAATCGTTAACTTTTTCATAAGCCTTTTCATGATCTACAATATTGAG
ATTTCCATTTCTTTGTGTACTGCTGTCGATTCCATTCTCATCCTCAACAG
AAGATATATTGTTATTGACACCAAAACCTCTGAAAGCGATGGTGCCAGAT
GGCGACATTATAACAGGTTGGGCGACCCTTTTCATATTATAGACACCAGC
AACAAGAGCTTGAGACAAATCGACAATATTTCTGTTACAATCGATTAATT
GGAAATGCTCTGGGGTGGAAGATATGCTTCCAACCCAATCATGGACAGCT
AACATCAAGGatgttggtttgaaaaatcttgtgAATGTTTTATTCAATTC
GATATGTCTGACAGCAATTACAATATGGTCATCTTCTAATGACAAGTCTG
GCTCAACTCGTGCCAAGCGTGCTAATCTCATTTCTTCATGTTGCTCTTGT
TGTGTGGTGGCTGTATACTCATTTTCTTCTGATGGGTTTTCTTCTCTCTC
TGATGAGATGCTAGTTTCTTGTTCCACTGGTGTAACATCTTCTCTATTAT
AAGATATATTTGTCAAATCAATTGAACTAACGGTGGGGGTTGTTGTAGAG
CTTGGTGTGGAGGTTGTTGGAGCAGGAAAGTGTGGTGTGGATGTAGATGA
TGTTGACATATTCCTCCTTGGTGGAAGGGATGGTGGAAGGGATGGTGGAA
GGGATGGTGGAAGGTCGTCATCATCAGGATCACTTGAATAATCTGCCGAG
TCGTAAGTGTTATTAATCAAATCGCGGATTGTTATCGACcgtgttttaaa
gaaaatgcgACAACGAGGTAAATTATGGGTTTTAATCAAGTTCCCAATTG
TATGTTTCATTGTTGTCTTCATCCATCGCCAgttgttgtttattttattt
gttattttggtGCTTTCGCGCCCCATTCGTAAACTCCTTCGTGGATTACC
TTTTGTTAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00034752-exon-sc0001213-1491911889:63207..65752 | TCONS_00034752-exon-sc0001213-1491911889:63207..65752 | Clytia hemisphaerica | exon |
| TCONS_00034752-exon-sc0001213-1510915933:63207..65752 | TCONS_00034752-exon-sc0001213-1510915933:63207..65752 | Clytia hemisphaerica | exon |
| TCONS_00034752-exon-sc0001213-1575043694:63207..65752 | TCONS_00034752-exon-sc0001213-1575043694:63207..65752 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0001213 | supercontig | sc0001213:63207..65752 . |
Blast
The following BLAST results are available for this feature:
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