TCONS_00034689 (transcript) - C. hemisphaerica

Overview
NameTCONS_00034689
Unique NameTCONS_00034689
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00034689 ID=TCONS_00034689|Name=TCONS_00034689|organism=Clytia hemisphaerica|type=transcript|length=143bp
ACACCTTACTTTCAGTGTTGACTATTTTGAGACATTTAGCTCCATTTATG
CATTCACTCAATCTGGCTATAGAGCTGAATAAAGATAATGCATCAAAGCT
GGAACTCTCACTTGCTCAGGTGATGATATTTTTTGAGAACGAA
Run BLAST on NCBI

transcript from alignment at sc0001206:15375..15755-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00034689 ID=TCONS_00034689|Name=TCONS_00034689|organism=Clytia hemisphaerica|type=transcript|length=381bp|location=Sequence derived from alignment at sc0001206:15375..15755- (Clytia hemisphaerica)
ACACCTTACTTTCAGTGTTGACTATTTTGAGACATTTAGCTCCATTTATG
CATTCACTCAATCTGGCTATAGAGCTGAATAAAGATAATGCATCAAAGCT
GGAACTCTCACTTGCTCAGGTGAGNTGAGCTGAATGGAGGTAATGCATCA
AAGCTGGAACTCTTACTTGTCCAGGTGAGTTGAATTATCATAGTCTTGAG
AACATAGAACAGTCATTTGTTGAGAAAAAAGTGTTGTAATACAAGACCTA
AAAAACATCATTGATATATAAATTTCTTTCGTTTGAATTTTAATTACATC
GCTAGGGCTGATGAGAGTAGTATTTGTAAAGTTATTACATTTGTATGTGT
TTTGCAGGTGATGATATTTTTTGAGAACGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020153XLOC_020153Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034689-exon-sc0001206-1575043694:15637..15755TCONS_00034689-exon-sc0001206-1575043694:15637..15755Clytia hemisphaericaexon
TCONS_00034689-exon-sc0001206-1575043694:15375..15398TCONS_00034689-exon-sc0001206-1575043694:15375..15398Clytia hemisphaericaexon
TCONS_00034689-exon-sc0001206-1510915933:15637..15755TCONS_00034689-exon-sc0001206-1510915933:15637..15755Clytia hemisphaericaexon
TCONS_00034689-exon-sc0001206-1510915933:15375..15398TCONS_00034689-exon-sc0001206-1510915933:15375..15398Clytia hemisphaericaexon
TCONS_00034689-exon-sc0001206-1491911889:15637..15755TCONS_00034689-exon-sc0001206-1491911889:15637..15755Clytia hemisphaericaexon
TCONS_00034689-exon-sc0001206-1491911889:15375..15398TCONS_00034689-exon-sc0001206-1491911889:15375..15398Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001206supercontigsc0001206:15375..15755 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00034689 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top