|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00033027 ID=TCONS_00033027|Name=TCONS_00033027|organism=Clytia hemisphaerica|type=transcript|length=953bp
agaactatattccaagatgacaactttcctgtcagtttgaatgataaatt
ttgaaggtgctggcttgaaattttcacagtattatcttgatgtacttttt
cattgatttctaaaaagattttactaaaatattgtgaaggcatttcgggg
cactttattaatttttgatttctttcagccaagccattttgtgcttgttt
aaatttcttattgttgattttttctttacaatgattttataatgcaactg
tattatcaagggcatatcattaatgtttaaaacgcactgagaagtaagta
tcaacgacaaaataataaaatttaccattaaagatgctacataactgatt
tcttgatcaacaaatattAGAGCTAGGTTAATTTTAGGAAGACAAATTAA
CGCCCGCAATACACCCTTCCGCCATCATGCTACGCACTCTAGAAGCCATT
GCTCAAATCCCAGTATCACTATTTATACGGGAGTGAAACCATGCTTAGCC
TTTCTTATTCTTGTGTTTTCAATTTGTTGGGATCACATGTGCAGCAGACC
CAAGACCATGTTTTCAAGTGTCAAAGAAAAGTCCGGATAGTTAATTAAAT
AAATCAAGAACTCTCTATGGATGTTTGTTCTGCTGGTCCTTACCTTACAC
TCTATGATTGCTGTTGGCTACTCTACTGCTGAATTCCCTAAAAAACAATA
AACATTGCTGACTGATGACAATCAATCCAAGAAGCTCCCATCCACACACG
TTTGTTACTTGCGTACTTGTTCTCCTCGAAGTCACAGTCCCAGATGCACC
TGTCTTCACTCTCTTCCTTGGATGGTTATTCaacaaaatggaaagttaaG
TGAACAGTCTTGTAAGTTCAAATTTCTATTCTCATCCTCCCCCCTCCAAC
ATAATCAAATCTTGGTATCTTTATGGTCTACTTTGATGGTACGTGTACTT
CCC Run BLAST on NCBI transcript from alignment at sc0001016:93388..94340 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00033027 ID=TCONS_00033027|Name=TCONS_00033027|organism=Clytia hemisphaerica|type=transcript|length=953bp|location=Sequence derived from alignment at sc0001016:93388..94340 (Clytia hemisphaerica)
GGGAAGTACACGTACCATCAAAGTAGACCATAAAGATACCAAGATTTGAT
TATGTTGGAGGGGGGAGGATGAGAATAGAAATTTGAACTTACAAGACTGT
TCACttaactttccattttgttGAATAACCATCCAAGGAAGAGAGTGAAG
ACAGGTGCATCTGGGACTGTGACTTCGAGGAGAACAAGTACGCAAGTAAC
AAACGTGTGTGGATGGGAGCTTCTTGGATTGATTGTCATCAGTCAGCAAT
GTTTATTGTTTTTTAGGGAATTCAGCAGTAGAGTAGCCAACAGCAATCAT
AGAGTGTAAGGTAAGGACCAGCAGAACAAACATCCATAGAGAGTTCTTGA
TTTATTTAATTAACTATCCGGACTTTTCTTTGACACTTGAAAACATGGTC
TTGGGTCTGCTGCACATGTGATCCCAACAAATTGAAAACACAAGAATAAG
AAAGGCTAAGCATGGTTTCACTCCCGTATAAATAGTGATACTGGGATTTG
AGCAATGGCTTCTAGAGTGCGTAGCATGATGGCGGAAGGGTGTATTGCGG
GCGTTAATTTGTCTTCCTAAAATTAACCTAGCTCTaatatttgttgatca
agaaatcagttatgtagcatctttaatggtaaattttattattttgtcgt
tgatacttacttctcagtgcgttttaaacattaatgatatgcccttgata
atacagttgcattataaaatcattgtaaagaaaaaatcaacaataagaaa
tttaaacaagcacaaaatggcttggctgaaagaaatcaaaaattaataaa
gtgccccgaaatgccttcacaatattttagtaaaatctttttagaaatca
atgaaaaagtacatcaagataatactgtgaaaatttcaagccagcacctt
caaaatttatcattcaaactgacaggaaagttgtcatcttggaatatagt
tct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00033027-exon-sc0001016-1491911889:93388..94340 | TCONS_00033027-exon-sc0001016-1491911889:93388..94340 | Clytia hemisphaerica | exon |
| TCONS_00033027-exon-sc0001016-1510915933:93388..94340 | TCONS_00033027-exon-sc0001016-1510915933:93388..94340 | Clytia hemisphaerica | exon |
| TCONS_00033027-exon-sc0001016-1575043694:93388..94340 | TCONS_00033027-exon-sc0001016-1575043694:93388..94340 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001016 | supercontig | sc0001016:93388..94340 . |
Blast
The following BLAST results are available for this feature:
|
