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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030537 ID=TCONS_00030537|Name=TCONS_00030537|organism=Clytia hemisphaerica|type=transcript|length=487bp
NCCAAAGAAACATTCAGCATACCAGTTAGAAAATAATAGGTCACATTCTG
AAGATATAAAAGATGGTGAAATAAacgaagaaaacgaaagtgaaagtaat
gataatgatattttttcaacaaaGACCCAAACAGACGGAGGAGGCTTTTC
GAAAAAGGGTGACAAACACAATGGGTTTGACGTGCTTCAACAGAACTTCA
AATTGGGTCTCAATGCGAGCAAAGAATTTGCAGACTTTTTGAAAGAAAGG
AGTAACATAGAAGAAAGttattcaaaaagtttgttaaaacTAGCTCACAA
GTGTGCAGCAGCAAATAACAATGTTGGAATATTTGAACCCTGTTGGAAGT
TTCTTCAAAGCTCAACTGAAAAGCTGGCCAATGTTCACAGTCAAGTTATA
CTACACTTAAACGATGTCAGCAAAGCTGTTAGAGAATATGGGgaacaaca
aaaagaaaaacaaaaacatATGAAAGATGATTTTTCT Run BLAST on NCBI transcript from alignment at sc0000826:53379..67122+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030537 ID=TCONS_00030537|Name=TCONS_00030537|organism=Clytia hemisphaerica|type=transcript|length=13744bp|location=Sequence derived from alignment at sc0000826:53379..67122+ (Clytia hemisphaerica)
NCCAAAGAAACATTCAGCATACCAGTTAGAAAATAATAGGTCACATTCTG
AAGATATAAAAGATGGTGAAATAAacgaagaaaacgaaagtgaaagtaat
gataatgatattttttcaacaaaGACCCAAACAGACGGAGGAGGCTTTTC
GAAAAAGGtaagataaaatttatatttttcaaactttctaacgtattaag
gccggtctccatttTCGtacgacatgagcgaaaactttttgacgtttttt
aaggtcattggttggttgaaaatgaagcaattccattggtcgaaattgac
gtaacggatggacaaagtagaacttcctttaacttttttttgttcgcgcg
aaaaaGGTTAAGAGAAAAACTGTCgtccatttcgcgcgaaagcctttatc
agcttttttttgcTTACTGATAGGCTCCAAATAATACCCTGacgtcaata
gacctttttataaattacgtcacgagcaacgaTTACCTCgtcttcaaaat
attgctaaaaCGTTCACtctatttaaaaagtaatatttAAAGTCTCAAGG
GATAAAGTCACCTTGGTaatgatttcaaaacgaggcagtcgttgcactTA
AAATGATTTACGAAAAGGCCTACCAGCAAAGGCTCATTTCTCCCTTCCCA
AAAGTAGGAGCGGACACCTTACTCTTTTTATCTAGATAGCTCAGCTTACC
ATTGATCCTTCCTCCATTGTAGTCAAACCcagaattttttcttcaaatac
aTTGCTTTTTACATACAGATAGTCAAAAATTCAAggtttagaattttcaa
aacccTAATTGTGCAggtcttttctttcaaaactaaTTTTGAATACAAGC
TAGAGAGCTACAATAAAAAGCAACGAAAGCAAGACATATGCAAGTTAAAC
AGTTTTGATTTAGCTAATTAAAGTGGTTTTAATCGCTTCCTGGGAGATCT
CAATGAGAAAGTCTTGTTTTTCAATTACTTACCggtaaataaatttattt
tgcatgagTGATGAGATGGTTCAAggtttagaattttcaaaacccTAATT
GTGCAggtcttttctttcaaaactaaTTTTGAATACAAGCTAGAGAGTTA
CAATAAAAAGCAACGAAAGCAAGACATATGCAAGTTAAACAGTTTTGATT
TAGCTAATTTAAAGTGGTTTTAATCGCTTCCTGGGAGATCTCAATGAGAA
AGTCTTGTTTTTCAATTACTTACCggtaaataaatttattttgcatgagT
GATGAGATGAGTGAATCAGAACTCAAAAAGCTCAGAAATGGAAACTGTTA
AGTGTGTGACTAGGTGGAGACTTTTCCGGGGTGTGTAGACGTAGAGCGGC
GAATAGAATTATGATAAAttacaaaaacttttcaaacaaCTTCCTATACT
GGAATAACTACTACGTACTATCGGTTATTATGTAATCAATGAGCGATATC
GATCAGGCAAGTAAATGCCATagtatttttcttaatttgatataacctcg
ttccctgcgcatcatcagcttttttatgctttaactgTATTCTTTTTTCC
TCTCAAtactcacaaaagttgtcaaaataaagttttttaagTTCTCAGAA
TATTCTCCAGTAGTGCATATCACGAATTGTCAAATATACGGGGGCGAGAG
GTTGGTCTATCGTAACTTTGTAACACACACTCGTGTAACAAAGTTAAGAT
AGACCAACCTTGATAGTACTATCAAGGTGGACCTAGTATACCTTGATAGT
ACTATCAAGCAAGGTGAACGTACTTGCTCAAGCTTTGTTCCATTTTCAGT
AGTGGCATGAACTTgcatttctattttttttttgccgggAAAGGTAGTAG
GCAGAATAGGCCCAAAAGTCAGTCAATAGGGCCCCTCAATAGCGCGTGGG
ATGggatcccgggggggggtacttagggtATGtttgctgggtatgtgcgg
acggtaagggtcgggtttttcacctctcaaagtctctctaagggttacaa
aaatcaggaaatttcaaagtagtctctctaagggtgggaaaatcacgatt
tttagaaaaaaaaaattgattttgagagaaaaaattacaaaaaagtctca
ctaagggtaggaaacttttgaaaatcagagaaaatttttcgaaaaagtct
ctctaagggtcactttttcactaaaatttggtctctctaagggtcagttt
tcggaggtcccgtccgcacataccccccATTCCCcaaccctagtcccccc
ccccccgggatggGATGGGATGGGATGGGATGGGATGGGATGAGATGGGA
TGGAACTGtagcgaaaaaaaaagaagaaggcgGGCAGATTCCTATCTAAC
GCCCTTCTTTTCATGTTTCACGCCCTTCCGCCAAAAATCGATCTTGGTCt
cactcaaaaatcaaaatattgtacTTGGTCACACTTATCTTGATTTGTGT
CGAGAAAATAACCGCAAAGTGTCTATTGAGTGAGTCAACCATTATCTGTT
GAAGGTCCCTCTTCGGCAAAAAGTGACATGTTTTGAGATTTTCATGGAGT
CATGAGTGACAAATTGTCAGGATGCATGATGTTTGGGGAAGTCAATTtta
tttgtattgttttttttttgtgttctCAGAAGTCTGAAGTAACTTTCAGT
CTAATCATCAAGTTTAACTTTGCACGGCTCATATTCTTTCAGCAGGTTTA
TAgtcaaacaaaaagaatttgtattttgacttttttatcttctcttttAT
AATGTCTGGAGGATGTTTCACTGGTCTTTTGAGGTTAATCATGGCAAGAT
AGATGAGCATTGATCTTGCCCGGGAAGGGTCCTAGCTGATGATTTGTTTG
CTTCAGTCAGGAATATCCTTGCAAATCAGGTTAGGCGGCAATCaccacaa
atatcttcatttcgcgtcttCGTtggtagcgactccagaagtcacgcaac
tttcgttgacgtcaaaccaaatgtttcatttttccgtgaactttgaaccc
ttcgaacTTCTTTTCTATGTATGCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttccag
cggtatataacactgtggacacgggctagacggcaaattggtaaaatgcc
gaacgttttgcaacattttgaaaattgtttgctgacgggagaaaaacatt
ttgcaacTTTCGATGAATAAAtatgtctggaaacggaggaaaatgtgttt
gaaggctgaaactttgtatgtttatcagaaaaagggtgaggaattcaaaa
atcacaatcgctaattctaatTCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNgtagtttttttcacttttttgcttct
tttgcatgggaatgtcccaaaaaaaagtttttatttctgccgaaatggat
tttctattcatttggggtttctccttcagtgtagacctaactcttcatac
aaaagttacgggaaacgcatatttggactttgtaccctatgctgcactca
agcacttgagccaaaatcctgcaaaggcgggacaaaaatcagttttNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNgcactatcgtaaagctagaatcgct
tcgcgtactcttcgcttgagaaaatgattgacagattgaagtttttcatc
cccgtGGAGCGCGCCGCGTAGGAGCTCGGGCGCCatgcgagagttctcgg
ctcaatcctcggaccgcgctaaaaatggtagactgagctgcgatagatca
tttcgatggaagttgttggaatgtttacaaggctcttgacagaatattgt
ttgatttatagtcatctggggtaattacgggacgattttgacttatttgg
gcatcactctgaaagtattaatcctagagatctgatcttttgatatttta
tttgtcAAAGTATGACCTTTACATAAGATGTAttacttttccttgaaatt
tagtaGATGTTCCTAAAATTTATTTNCCAAGTTTgtacttttcttataaa
aaataaacacttgAAACTCAAACTTTAGTGTCCCATAATTACCCCAAAAT
TAAGATTTGACTACAGGGTAAATATGGGACACTCTTTTTAGAGATAAGGT
GCTTTGTTTGACAATGGGACTATTATAATCTCAAACCATAGTATCTTGAT
GCCAGAATTCAGTCACAATATAATCAAAGTGATTGCAGCTCTTCCTGACA
CTAAAGCTTGAAAAGTTCCTTCTAAAActacgaaaattgatttttatggt
gACATATGAAACTTTTGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNctttttttgacatttttagtcaaatttttgaca
ctaaaatttgaatatctttacaaccacttatcctctagaggcctatgacc
cctcattttctttctttttaaaagctctacaagataggataggttttgag
aaaaaaattaaaatttgaaaaatcttctggagttgctatcgttgggtcta
aaaaatgagtcggtcggtcgtaaaaattttcgggtttacATAACgaccca
aaatggcgcatgtaatgatcactgacctttatataccctggaccaagcat
ctcagtcccagccaagcaaaatctttgatcgcagttttttgaaaagtggt
accctaaggccgatgaaatttacatatgagtttaccgtcgtgaacttacc
caaaaatagatgcggcatgatttcattattcattattcattattttccca
acNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCTTCAAC
CCGACGCATGTTttgcgaacgaaaaataaagatcgattgctacagtggcg
ctagatttggcaaaaaactaaaatggctgcCAGGGCGGTTAGGCAGATAG
ATGGGCGTGACGCCCGCTGTagttgtaggattgagggcggtcacattttc
tttaaaaaatcttctttgtttacccgtgTTTACTCTGGGAAAAAGGTCAT
GCGTAGAGGGAATCCTGcgtagagacgattttaacaacgatggaggttgt
agttgtaaagaaatatagaaataatgaaaattttaggaattttgaagata
atgaaatttcaatgcgggtgctttttagagatgcgggcggccgacggtaa
actcatatgtaaatttcatcggcctaaaTGCTAATGGCGACACTACTCgt
tagcggtgtaaatgcatcgagagcgctaggtctactttttctcaaattct
tttgatgtagcggcgttagacgttaatttttaacattgcaatggcttctt
ctcgggtaccaattccaaaaaaactcaaatcaaagatggcggatattgct
tggtccagggatatataaaggtcagtggtaatgataaacaaagtcaaaat
gccgcGAATGCAGCAGCAGGGAGAAACTTGAGAGAAATGGAGAAAAAGAA
AGGCTACACGTTCAATGTTGGGGAAGCCAAAACACAATAACAATCAAGAG
AGGACAAAAAACCAAAGGAACCAAATATAACATTATCACaagaatgcgct
agaaatcgctcgcaaaaaatcggcattaataaaatttttgaacgaaggaa
acgtcattgacagaaaaagtccgacaaatttaccgactcaccgactcaat
tctactcaattttcgagagtcggtcgggcgacgcgaaacgaagatatttg
tgattgccgccttaggGGTACCACtcacaaaatttattttagGTTACAGA
GTAGAAAATCATCAATAATTGTCTTTCAAATCCATCCAGAAATATTAATT
TTCCATGTCAAATGTTGTCATgtttcttttttgtcacttCTCAGCTGTtt
cgaaaatcaaaacaaagggCCCCATGTTtatcgtaagttggtctaaatgg
gccattccaaaaattttttgttggattttcgattgaaaattgaaatattg
cattttagcaagaatttcaatttcaaaatggtggatatacccaaattcCC
CAAGCCCagatttgattttcctgcagtatttccagaatagaCCTTTtagc
ctttccatccgccatcttgaattgtatgcaaaaatacaggaacgaaaatg
ccgtggttggatttagttggaaagtatgcaaaacatatgcaaatttacac
aaagattaaaaagacaacaacgCATCTTACAAATAAATATAATAAtcctt
agaacaataaaagatggaattttttaatccaaaaagaaatatttacagaa
taacaaaagccttttagaaatttgttcttaaagacatagcatattttgtt
ttcatgccattaaaaaactatacaaagacggagtacacacatcaaacttt
cataacacgcaaactgaaagcagtaattatgaagTCACACatcatcaatg
ttttgattttatcatttggcagctctattcccaggagaataaattaccgt
cagccgaataaggattattttttacctttgcgggtgatttttcagtttga
gtttatgtctaatgttatggtcttttgaagtgcttgttctaagagatagG
GAATATAATTGTtcttagttttcaagagaagcaaatttaatcttctacaa
gattacactttaatataatgccaattatgcatgtaagttttgtattaata
ctttctttttgcatatgttttgtaTACTTTCTAGATAAATGTGGGACATG
AGGCTTTCCAAGACTTTTTGACCTAAATTAAAGACTTAAGGCTGCTTATG
GTTGACCTAGTAATGGAAGATTCAAAAAtccttatattttattttgaatt
acaAAAACTTGTGGACTTGGGCCATTTTCTAAAAGAGGACATGCTGAAAT
AGGGGATAGTcttaactcaattttcaaaaaagtggaCTGAAAGTCTGTTA
CATTGATACTGTGACATGCAATGTGAGAACACAAAAGTAGCCTGTATGAA
ACCCTGTGAAATTCCATTgggtaaaaaaaaacatcctATTGCATTAACAC
TAAGTCTGGAAAACCTGTTGTGAATGCACACCCCACACAATTGCAAGAAT
GTGCTAGACTGTGCGATTGAAGCTAGAAAAACCAAGTATTTGCTATTTTT
GTGTAGTGCTGAAAAGTATTATTGAGTTACACCTGATACTAGACACCACT
GTCCAGTATTTGCAGTTTTTGGGGAATCCCCCAAATTCTTCATAATTGAT
GCACAACAAAGGCATTTTTAATGattaatcaaatttaaaagaaagCCTAG
TTTAGAAATGGCTGATGCGCCAGATAATTAGAAATATATTTTAGGATTAG
CTCGAGTGAAACACAGAGTTTGTGAAATTTCAAACTGGaataattttatc
aaattctatGCCAGAGCGAGAGTGTGATAAGGGGGATGTGACAAGCCATG
AAAACATCAGAAGTCTTTTTTAAATGTGATCCAAGTTTCTCAAAATGAGT
CAGCaagtttacaattttcttagaTTTGTGTTGTATTTTGTCTTCCTACC
TGTTTTAAAAAGTGATTCTTTTTACACAGCACAAATGATAGACTAaagta
aacaaaataatttaaaacaCAGCACTtctgtttgtttactttttaaaagt
CTTATAACAAAAGGTTTTGACAGAGGTAAATTTTAGGATTAATGAAAGTG
CTTGTTTTGTCATAGCTTTTGTAGTATTTTCTCTTATCTGTAAATCGAAA
CATGCATGTTTTAAAcagaaaaacatgtttttcatACCCTGTCTTTTTTA
CAATATGTGCATTCATATGCAAAATTAAGCTATCATAACGTCTATAATAA
CTAAAAGTTTCTTTCAGGGAAAATACCtgattcatttttggaaaatgttt
ttatattgaCCAGTATTGACTGAAAAAAATGGCTTCAAATATGAAATATA
GATTTAAAAAGTTATCAAGTGGTGTTCAAAGATGTATTAATCCTTATAAa
gtttgttatattttaaaGCAAAACTAACAAAAAAATTTGTACTTCTTGGA
ATTCCGCAATTCTTTATGGAGCTACCAAATACAATAATGATTACCTaaca
atttcttcaaaacatcTATGATAAACATACTTCATATGTATTATCATGTT
TTGTTCTATATAAATTATTTGGATTGCTGTTTGATATGTTCAGATACTGT
TGGTAAATAATGGTGAATTTTTCAGAACATTTTTGGGTGAGTATTAAGTT
GAGTGTTAGATTgaatatttaattttcttttcagttCGTTGGCTACTTTT
TTtacaatgtttttttaaatttaaagtatTTGTTCCAGCCAACTGCAGCT
CATCTAGAACTGTAATTGAATTAATTACTCGTGTACCTTTCCAAACATCT
TTCGACTATAGTCTGCGCACCAGCCGTTAGAATATTTGTCAGTTTTTCAT
GTCCTGTTATAGTCCATTTAGCCTAGGAGCTGTTAGCGGCACTAGCGAGA
CCTCAACGAATGAGGGAGTCTTTAAGATGCATATGAATTTGTTTCGTTTG
ATAGATAAGATACTATACTCTTTTTTCGAACTTTACTGTCTCACtattat
ttttaagaattgCTAAGTAAGCACCTGCATTATCACAAGTAGGTTGCatt
aaatttattgaaatttcttGTTCTTAGGGTGACAAACACAATGGGTTTGA
CGTGCTTCAACAGAACTTCAAATTGGGTCTCAATGCGAGCAAAGAATTTG
CAGACTTTTTGAAAGAAAGGTAAAATAGATATTCTTGTAAACTTTGTTCA
AATTGTGTGAGTATCTCAGGGCTTGAAATGACCGTCAGACATTGGAAATG
GTTCAGCATGGTTCCATAGAAATTGCTACAGGCAATAATCATAATTTTCA
TACAAAATTAATTAACCCTGATCAAACATTTTGTGTGACAGAAATTGTTA
TTTATGGCTTGAACAGCTACTTAAATTACTCCTTGCTTAGgttttctgaa
aaaagttttgttaaCTATTATTAAAATTTAATACTTGTCTATTACCGTCT
CTTTTCAGGAGTAACATAGAAGAAAGttattcaaaaagtttgttaaaacT
AGCTCACAAGTGTGCAGCAGCAAATAACAATGTTGGGTGAGTGTCACAAC
ATTATCAATTTCAAGTGTTTGATTCTAACTAATTTAAAGTTTTTGTATGT
GCTGATTTATTTACTACTATTTGATAAAATTATGGAATTTGGATAACCCA
CTCCGACAGCtaatttgctaatttttttgattttttttacaatgaACTTT
TCATAATACAGAATAGAATGATGAgggatattttatatttttattttttc
tcagatttctcaaattttccacACTTTTTTCAGAATAGAATCACATtttg
attctatttatttcactttattatattatttcaaggtattagGAATagaa
aattgctttgagttGCAATCACAATCCTATTAATATACTAATCTGTACTA
ATACCAACTTTCTTTTGAACAGAATATTTGAACCCTGTTGGAAGTTTCTT
CAAAGCTCAACTGAAAAGCTGGCCAATGTTCACAGTCAAGTTATACTACA
CTTAAACGATGTCAGCAAAGCTGTTAGAGAATATGGGgaacaacaaaaag
aaaaacaaaaacatgtaATTATTCAGTTCTCTGTCGCAGCAAAGTAAATA
AAGAGACTTTTTCTGTCGCAATTTTCTCTATGAAGCTGCAGTTTCACACG
ATTTAGTTAATGAAAGTGTGTAATTGTTATCAGTANTTGACCACAGATTA
TTATGATAATTATTGTAGTTTTGTTCCATTCACACTCTATGAAGCTGCAG
TTTCACACGATTTAGTTAGTGAAAGTGTGTAATTGTTAACACCATTATCT
TTCAGCccatttcaaattaaaaatatatattcaacAATATATTCAACACT
AAAAGCCTTGAAGCCATGTGACCAATTATCAGTaatgaaggcttcaaaat
tctTCAGCCTTTCAGCTGCAGATTCTGATACTCTGACAGATATATGTTGA
AAATTCGAGGAacttgaatttgaaatgttggtgaaatttttgcttttttg
agtTTCTTATTTTCTCTTATGTTTTAACCATAGATGAAAGATGATTTTTC
TTCAACAAACGAGGCTGTCCAAAATCTACAACAACTAAGTGTTGCACTAT
TAAAGGTGAGGAATCATGCAGATTTGTATGAAAACAAACGGCATAACCAA
AAAATAATCATCTCTTTGGATTTCAAGTAAAAATAACCATGAAATAAATT
TGTGCATGACTTGATTTTCCAACATTATGTTTGTTGCTGTAGATCCTAAA
TAGGTGTGCCATTTTGACTTatgttatacacgttttttttttattagaac
acctaaaatttggctgagcctggatgtgcttattttttttagaaattttc
agcctaaaatgttcttaaatgtgttcttaatttttcagactactctaaat
cgataatatcatgcaaaataaagagcacgtaaaattggtaaaatttggac
aatatttgattttagaaaattcatcactaagttcagttaaaactgcttga
aaagaggaaacaattgtagtttcttgtcatttttttccaaactgaggctg
ggcatgttcttaagatgttcttaatttttcgacgaagtTCAGACTCaacg
ttcttataaactgggttctaataaaaaaaaacgtgtatacctTATTGTGG
TAGTGTCATTTCTAAATTAGGATGGCTCTTTGGCATCTAAAAATATCTAT
TAAAGCCTTTTCTTATCCTAAAATTAGACCAGACCTCTACCATTCTCATG
CCTAAATATTTTTAATCACTTTCCAGACAAAAGAAGCCTATCACCAGCGT
TCACAAGAGGTTGAAAAGTATCGGAAAGAAATGACCAATCTAAAAGATAT
CAAAACCGTAATAACATTTTCAGATTAATGAATAAGGAACTTCTGTAGCT
TTCATCCATATATTTTGTTGCNGAACATTTTCAGATTAATGAATACGGAA
CTTCTGTAGCTTTCATCCATATATTTTGTTGCTGGACTGTAGATTTTCCt
agaatttttcgaaatttgtgtTTTGCCCTTTATAGTTTTGTACTTCGAGG
TAATTTGATTTTGGACATTATGAGCTTtcacttttcaattttattatctt
tattttcgccatatcaattttttttatggtattttgtgttttttttgtag
GCGGAAACTAAATACAAAAAGTCAAGTAAGTTgggttattttaaattttt
atttgtttggtAATTAGGCTTTTAAAGATGAATAATCAGGTCGCCCTGTC
CAGTAGGGAtctaaatgataaaaaataagtACNTATTTGTTTGGTAATTA
GGCTATTGAACTTGAATAATCAGGTCGCCCTGTCCAGTAGGGATcgaaat
gataaaaatgataaataccTATATTTTGTTTGGTAGACTATTATCACAAG
GACAATATGTTATAAAGTTTCATTTCAACGTGTTTATGAATTTGGTATTT
TGTTTTCCAGCTGAGGAATATAAACAAATGGTGGAGAGAAGAGAGATTGC
TCGGAAAGAGTTCCAAGAGAAAATAACTGAAATGTCACAGGTAAAAACAC
AAGAATCTCTTTACTTGACCTGTAACTTATAGTTTTCCCCCCGAATGTTA
TTCAAAAAGAATACTCCTAAAGGTATACATATATTTTGTTAATGTAAACA
ATTCATGCTTTGACCTTGTTTGAGGGAAGACAGTATCTGAGTATTatatg
aaatcttttataataaTCACAACATCATTATGtgaaaatttttctcagaa
acTTCAAACTGTTGAAGAGTCCCACCTGAAGCAGATGTTAGAGTTATTGT
CGAAATATGGAGAATCTATCAAAGTTGAAAGATTTCTTCTGGAACAAGTA
AGTTGATGCCATTGGGATTTATTTGACTTCTCACTTGAACAGAGGAAGAT
CAAAACTCGATACTAATTCACTCAATACTATTGGACTTTCTTCGACTCAA
CTGCTAGTTGAAAAAACCTCAGAATCGTAGTCAGCTACTTAAAAGTTGGT
TCCAAACGGTAAAGATTGGGCACAAAAATTCATAGATATtggtttttgat
taaaaaacaacaaaaaagtttaaatgagAACCACAAATAGATTATTAGGT
CTAAAGTTGCTGCTACTTTTGGTTGGCTACTTTACCTAAAAAAAAAGGCC
CGAACCTTAAGGAACCTAAGAATAGTCacattttattacattttaaaacC
ATAGATCATTGATGAATTTGGACGGAACATGGTAGCACTCACAGTTGACA
AACTATTACAACAGTTCATCAATTTAAAACAAACTGGAAAAGATGTACCA
GGTATGCCAGTGTTCTTATACCGTAGATGAAAGATGATTTTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030537-exon-sc0000826-1491911889:53379..53535 | TCONS_00030537-exon-sc0000826-1491911889:53379..53535 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1510915933:53379..53535 | TCONS_00030537-exon-sc0000826-1510915933:53379..53535 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1575043694:53379..53535 | TCONS_00030537-exon-sc0000826-1575043694:53379..53535 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1491911889:63356..63447 | TCONS_00030537-exon-sc0000826-1491911889:63356..63447 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1510915933:63356..63447 | TCONS_00030537-exon-sc0000826-1510915933:63356..63447 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1575043694:63356..63447 | TCONS_00030537-exon-sc0000826-1575043694:63356..63447 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1491911889:63737..63814 | TCONS_00030537-exon-sc0000826-1491911889:63737..63814 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1510915933:63737..63814 | TCONS_00030537-exon-sc0000826-1510915933:63737..63814 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1575043694:63737..63814 | TCONS_00030537-exon-sc0000826-1575043694:63737..63814 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1491911889:64201..64342 | TCONS_00030537-exon-sc0000826-1491911889:64201..64342 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1510915933:64201..64342 | TCONS_00030537-exon-sc0000826-1510915933:64201..64342 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1575043694:64201..64342 | TCONS_00030537-exon-sc0000826-1575043694:64201..64342 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1491911889:67105..67122 | TCONS_00030537-exon-sc0000826-1491911889:67105..67122 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1510915933:67105..67122 | TCONS_00030537-exon-sc0000826-1510915933:67105..67122 | Clytia hemisphaerica | exon |
| TCONS_00030537-exon-sc0000826-1575043694:67105..67122 | TCONS_00030537-exon-sc0000826-1575043694:67105..67122 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000826 | supercontig | sc0000826:53379..67122 + |
Blast
BLAST of TCONS_00030537 vs. Swiss-Prot (Human)
Match: FCHO2 (F-BAR domain only protein 2 OS=Homo sapiens GN=FCHO2 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 2.284e-24 Identity = 49/110 (44.55%), Postives = 76/110 (69.09%), Query Frame = 2
Query: 158 GDKHNGFDVLQQNFKLGLNASKEFADFLKERSNIEESYSKSLLKLAHKCAAANNNVGIFEPCWKFLQSSTEKLANVHSQVILHLNDVSKAVREYGEQQKEKQKHMKDDFS 487
G+K++GFDVL N K G ++KE ADF++ER+ IEE+YS+S+ KLA K A+ + +G F P W ++STEKLAN H ++ L ++ K V++YGE+Q + K K++ +
Sbjct: 12 GEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLA-KSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVA 120
The following BLAST results are available for this feature:
|
