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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030370 ID=TCONS_00030370|Name=TCONS_00030370|organism=Clytia hemisphaerica|type=transcript|length=1913bp
GGGCTTAAATTTgttttgtaacaaaatttatgAAACCAGGCTTTGTGCAC
ATAAAATACCAACTAGGATTAAAAAATGTACCATCGTTTTAacctgaaaa
tttattttttttaaattattattcCTGTACAcgatataaatattttttac
taaatttctgaatatttcttataaaatacGTTTTTACAGTAAAATTTTGT
GTTAAGAAAGTTCTCTCTTCTCATAGACCCGGTAGGGTTTTtaagccagt
gggggtaaaaataacggagtGAATCTCGATggaattgatattcccatatt
tattaaggctggggatttaaatttcattttttccaagTTAGAATATTTAG
TGGGGATggggaaaatagcataatattttgcagtaaggattagtttattt
gattattttcagcgaggATAAAAATTGGGGTAAGATGTTTCAAtgggaac
gatattttggccaatttttccagtgggaagggatcccagtgggtctgtga
gaagggggtgtaaagtTAGTTAAAAGTCCCAATAAattaaagtctgttcc
aaaatGATTTTAAGCAGTCCGCACACTTTGATACATAGCTCTTGAAGTCG
AGAATATATGTAATTAATAATACTTCGTTGATAAGGTATTTTCAAGCGGA
TAATTTGAAAACTTTAAGACTTTTTATCAAGAAAATTATAAAGTTAGAAG
TCACACAAAATGAGCAAAGCTATATTATTATAAAGTTTGATTGTTTACAT
TTCCGAGCTCATAGACAGCGTACTAAGCTTATGTCGAAAGTAATCAGCAA
CACCGATTTCGGTTTTTGACCCACTGTTATTGTTGTAAGCCGTCCTACAG
CAAATCCATCCCTTGAAAATATCTCGAAAAGCTTTCCTAATTTCTTCATC
TTTAATTCCATAGCAAATGACATTCAATGAAGCTGCGCAGAAGCATGGAA
TCATCACCAATCGCAGTATCCTGATACTCTGGTAAACCTGTGCTGGGTTT
GATGAGTCTCCAAAGTAACCAATCATGGTCAAGATGAAATAGACTCCGAA
GGGAATCCAACAGAAAATGAAGACACCAATAACAATCCCCAAAAAGATCA
TGATTTTTCGCCTATACATCAGTTTGACTGGACTCTCACGATCACCCGGT
AACTCCatctttgatttcttataaaaCTGACGCAAAATCAAAGCATAAGT
GACCATCATTGTTACAATGGGGATGCATAACCCAGTTAAAAATAAAACAG
TTTTGTAGAGCTCTGATTCCACTCCTAAATTATCGCGACGTAAACAATAA
CCATATTGTGCATCCCatacaaatgaaaacaaatttggTATCACCATTAA
GATTGCAACACACCAGAACCCTAATATGATGTAGGTAAGTTTTCTTTTGC
TGTCATCTCTGTGGAGAGGCTTCTTAATGATAGAATACCATTTAAATGAC
ATCAACGAAATATTGTAAACTGTCACAAAAGCTCCCACGAAGAATATAGA
GCTCCTAGTTAATATTGCACAAGCCATACTGCTCAATTTGAGCGAGACTC
TCGATTTAGGAGATCTCGATTCAGCAGACTCGGTCAATAATGCGAGAAGC
AACGGTAAAGCGCCAACGttttggaaaatgttcgaaataCAGAGGTTCAT
GagaaaataattgaataatGTTCTTGCGATTTTTCCATGATGATAAAGAT
AGATTGTGATCGCACTTGCAATGATTCCAAATGTTATAATCATTAAACTA
ACAATTATGTAAAACAACGAAAATGATGTACTGAAGATTTTTTCGACATG
TGAGTTTCCTGttgttgtgttgttgttttCAACCATGGCGTTGAGAATCT
TTTCGAATATTTATTTAGCTTACCAATGTTTCCAATTCACTGAGATACGA
CTTTTAACATGAC Run BLAST on NCBI transcript from alignment at sc0000812:91689..93661+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030370 ID=TCONS_00030370|Name=TCONS_00030370|organism=Clytia hemisphaerica|type=transcript|length=1973bp|location=Sequence derived from alignment at sc0000812:91689..93661+ (Clytia hemisphaerica)
GGGCTTAAATTTgttttgtaacaaaatttatgAAACCAGGCTTTGTGCAC
ATAAAATACCAACTAGGATTAAAAAATGTACCATCGTTTTAacctgaaaa
tttattttttttaaattattattcCTGTACAcgatataaatattttttac
taaatttctgaatatttcttataaaatacGTTTTTACAGTAAAATTTTGT
GTTAAGAAAGTTCTCTCTTCTCATAGACCCGGTAGGGTTTTtaagccagt
gggggtaaaaataacggagtGAATCTCGATggaattgatattcccatatt
tattaaggctggggatttaaatttcattttttccaagTTAGAATATTTAG
TGGGGATggggaaaatagcataatattttgcagtaaggattagtttattt
gattattttcagcgaggATAAAAATTGGGGTAAGATGTTTCAAtgggaac
gatattttggccaatttttccagtgggaagggatcccagtgggtctgtga
gaagggggtgtaaagtTAGTTAAAAGTCCCAATAAattaaagtctgttcc
aaaatGATTTTAAGCAGTCCGCACACTTTGATACATAGCTCTTGAAGTCG
AGAATATATGTAATTAATAATACTTCGTTGATAAGGTATTTTCAAGCGGA
TAGTTTGAAAACTTTAGACTTTTTATCAAGAAAATTATAAAGTTAGAAGT
CACACAAAATNGATTTGAAAACTTTAAGACTTTTTATCAAGAAAATTATA
AAGTTAGAAGTCACACAAAATGAGCAAAGCTATATTATTATAAAGTTTGA
TTGTTTACATTTCCGAGCTCATAGACAGCGTACTAAGCTTATGTCGAAAG
TAATCAGCAACACCGATTTCGGTTTTTGACCCACTGTTATTGTTGTAAGC
CGTCCTACAGCAAATCCATCCCTTGAAAATATCTCGAAAAGCTTTCCTAA
TTTCTTCATCTTTAATTCCATAGCAAATGACATTCAATGAAGCTGCGCAG
AAGCATGGAATCATCACCAATCGCAGTATCCTGATACTCTGGTAAACCTG
TGCTGGGTTTGATGAGTCTCCAAAGTAACCAATCATGGTCAAGATGAAAT
AGACTCCGAAGGGAATCCAACAGAAAATGAAGACACCAATAACAATCCCC
AAAAAGATCATGATTTTTCGCCTATACATCAGTTTGACTGGACTCTCACG
ATCACCCGGTAACTCCatctttgatttcttataaaaCTGACGCAAAATCA
AAGCATAAGTGACCATCATTGTTACAATGGGGATGCATAACCCAGTTAAA
AATAAAACAGTTTTGTAGAGCTCTGATTCCACTCCTAAATTATCGCGACG
TAAACAATAACCATATTGTGCATCCCatacaaatgaaaacaaatttggTA
TCACCATTAAGATTGCAACACACCAGAACCCTAATATGATGTAGGTAAGT
TTTCTTTTGCTGTCATCTCTGTGGAGAGGCTTCTTAATGATAGAATACCA
TTTAAATGACATCAACGAAATATTGTAAACTGTCACAAAAGCTCCCACGA
AGAATATAGAGCTCCTAGTTAATATTGCACAAGCCATACTGCTCAATTTG
AGCGAGACTCTCGATTTAGGAGATCTCGATTCAGCAGACTCGGTCAATAA
TGCGAGAAGCAACGGTAAAGCGCCAACGttttggaaaatgttcgaaataC
AGAGGTTCATGagaaaataattgaataatGTTCTTGCGATTTTTCCATGA
TGATAAAGATAGATTGTGATCGCACTTGCAATGATTCCAAATGTTATAAT
CATTAAACTAACAATTATGTAAAACAACGAAAATGATGTACTGAAGATTT
TTTCGACATGTGAGTTTCCTGttgttgtgttgttgttttCAACCATGGCG
TTGAGAATCTTTTCGAATATTTATTTAGCTTACCAATGTTTCCAATTCAC
TGAGATACGACTTTTAACATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030370-exon-sc0000812-1491911889:91689..92340 | TCONS_00030370-exon-sc0000812-1491911889:91689..92340 | Clytia hemisphaerica | exon |
| TCONS_00030370-exon-sc0000812-1510915933:91689..92340 | TCONS_00030370-exon-sc0000812-1510915933:91689..92340 | Clytia hemisphaerica | exon |
| TCONS_00030370-exon-sc0000812-1575043694:91689..92340 | TCONS_00030370-exon-sc0000812-1575043694:91689..92340 | Clytia hemisphaerica | exon |
| TCONS_00030370-exon-sc0000812-1491911889:92401..93661 | TCONS_00030370-exon-sc0000812-1491911889:92401..93661 | Clytia hemisphaerica | exon |
| TCONS_00030370-exon-sc0000812-1510915933:92401..93661 | TCONS_00030370-exon-sc0000812-1510915933:92401..93661 | Clytia hemisphaerica | exon |
| TCONS_00030370-exon-sc0000812-1575043694:92401..93661 | TCONS_00030370-exon-sc0000812-1575043694:92401..93661 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000812 | supercontig | sc0000812:91689..93661 + |
Blast
The following BLAST results are available for this feature:
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