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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030299 ID=TCONS_00030299|Name=TCONS_00030299|organism=Clytia hemisphaerica|type=transcript|length=825bp
NAAATGATTTGGTAAATTACCGCCAAGCTAAATATTTTACAGgtGATAAC
TATTGGAAACCTGTTGTCACTCATTGGGCCTGGGTACCAAACAGCCTGGG
TTACACGTGGGATCCAGAAGATGGTAAACTTTCAACAAGGTCATCAGTTC
TTAAAGAGGATAGACCcttcaaaaatgttgttatTGGAAATGATGGGAAA
CATTTTACGTTTTCTGATGACCAACCAAAACAATGTTTTGGAAACGTTTG
GGACTGGTTTAAGATTGAAGTTgtttgaaattctttaaaaacgtcaaaaa
acttACCAGAAACCATGTTTTCCACCTATGTATGACACAATGGTGAAAAA
CtagataaaaaacaaactttatatCAACAAAATAATCAACTGATGGCAGG
AGATGTGGATTCCACATATGTCAAAACATTTCGTAAAAAGATTAGATTGC
AggaacatttttttaaacgaGTACATATATTTAAAGTTGTTACAGTTTTA
AAGAAAACGGACACTACTGCCAGCTTCACGCTTAATGCGATCCTTTGGTT
CAGTACCGTGAACACCGAAGCTTCTCTGAAGTTAAGCTGTGGAGAcgtac
tgtaaaaattttatcgtGCATGTAATGAATCGAAGATGGAGAGTACatat
taaccctattcatactattatactaggcttttaggggtggTTCAAAACTA
GTGGAGGGGGGCTTTTcgtgtaccaccccttaacttttgttCTAGAGGGt
ctttttggttgaaatttggcacacaagatccttgtcacataaggtaactt
ttaacgaaaatttttttttgatgac Run BLAST on NCBI transcript from alignment at sc0000806:124201..126884+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030299 ID=TCONS_00030299|Name=TCONS_00030299|organism=Clytia hemisphaerica|type=transcript|length=2684bp|location=Sequence derived from alignment at sc0000806:124201..126884+ (Clytia hemisphaerica)
NAAATGATTTGGTAAATTACCGCCAAGCTAAATATTTTACAGGTAGAAAT
TCTTTAACAATCTGTAAACTATAACAGCTTGAAGGTATTTCATGGAGTTT
GGTAATTCGTTACAAGCTATATTCAGGGTTGGAGGGCGTAGTGGTGTGGT
GGTCATCGCTCTTAACTCCCAACTGGGAGGTCAGAGTTCGATCCCCACTG
TAGTACTACGGTTCATTTGGCAAATGAACATACCTTTACCCGGATCAACC
CATatcatgtgaggggaattggatACCACTACTCtcatacaagagtgtgg
gtgataTACCACTCATCCCGTTCTGCGCCTGCGACgagctattcatgata
ttcatgacgtaatgttttctacggaaatccccctgttttagccagtagtg
gcaaatttaagcaagacaaaagttgtataaaatttgccactactggcaaa
aaccggggtctttccgtagaaaacatNAagaagctctgtgtgcagtgcgt
gttatgcttttagctagattttgacacactttttgacatccactgaattg
atagaaaatttgaattattatttactgcaaatttcgaaatttttttcaNT
CATCCCGTTCTGCGCCTGCGACgagctattcatgatattcatgacgtaat
gttttctacggaaatccccctgttttagccagtagtggcaaatttaagca
agacaaaagttgtataaaatttgccactactggcaaaaaccggggtcttt
ccgtagaaaacatttcgtcatgaatatcatgaatatgctCTCTCCCGCGC
AGCTCACTATGCATCATGATATCTGTGTCTCGCGTGCACAGAACCAGCGG
TGTCCGGACAACACTAAGCGTTCCAACTTGAAAAAGGGGAAATTCTTACT
TCGTAAGGATAGTTGGACCCATTCCCCAGAAGGGAGGGCTCGTATCATAC
AGGGCAGGAATACATGAAGGGTTCCCCGGAAGCCATTATTCGTGatttat
attaatattttttatattttgcgaGTTGATAACTCACAAACCTATTCTTT
GGGACATATTCGGGAGTTAATATAACCCATGATGCCAGGGGAGGTACTAG
GGTCGGCAGATTAGTGGTATGTTCGGATGGAACCTCCGaaaaccaaccct
tagagagcctaaattttgctaaaaaggtgacccttagagagattttttta
caattttttctctcgaaatcaaaagaaatttcctaaaaatcgtgaatttt
ccgagctttagagagactttgaaaggtgaaaaaaccgacccttaccgtcc
gcacatacccagtaCCTATTTTTACCTAAGTAGCGGGCCATGATGTTATT
TCTAAGAATAATTTCACGAGCTATCAACTCACAAAAATACTCTTCGggat
gctccatcccaccaacacaagaaaaaagtgcgtgtctcatggtttctttt
ttgtttcatgggacaaaaagtgagggaaatacccaaaagacacgctgatt
ttGTTCTTGGGACAAAAGTGAGAGAAGCGCAAATGTTATTAAAAGAAAAA
TGGGGTGGAGACACGAGAAAGCGTTTCAGGTTGGTGGCATGGAGCATGTT
GCATTGCACCAATGCGAAAGAAAACTTCTAGTCTTCCCAAGCCTTAAGAC
GTGAAGTCCTTGTTTTTGTTATATCTGGAAGATGTTTTTCAGTTTAACTA
AGTTACGTAAAGTCCGTCTAGTTTCATCTAGATAACTTTTTTTCACAACT
ACTTTATTTTTATCGTCACAAACAAAGGTTTGTACTTATTTGAGGTTATC
GATTTTTTAGATGAAACTGAACGACACCACAGCAAAACATTTAACTTAAT
AGATCACGAATAGATCACGTTTTGAATATCCgacaattatttttttcata
ggtGATAACTATTGGAAACCTGTTGTCACTCATTGGGCCTGGGTACCAAA
CAGCCTGGGTTACACGTGGGATCCAGAAGATGGTAAACTTTCAACAAGGT
CATCAGTTCTTAAAGAGGATAGACCcttcaaaaatgttgttatTGGAAAT
GATGGGAAACATTTTACGTTTTCTGATGACCAACCAAAACAATGTTTTGG
AAACGTTTGGGACTGGTTTAAGATTGAAGTTgtttgaaattctttaaaaa
cgtcaaaaaacttACCAGAAACCATGTTTTCCACCTATGTATGACACAAT
GGTGAAAAACtagataaaaaacaaactttatatCAACAAAATAATCAACT
GATGGCAGGAGATGTGGATTCCACATATGTCAAAACATTTCGTAAAAAGA
TTAGATTGCAggaacatttttttaaacgaGTACATATATTTAAAGTTGTT
ACAGTTTTAAAGAAAACGGACACTACTGCCAGCTTCACGCTTAATGCGAT
CCTTTGGTTCAGTACCGTGAACACCGAAGCTTCTCTGAAGTTAAGCTGTG
GAGAcgtactgtaaaaattttatcgtGCATGTAATGAATCGAAGATGGAG
AGTACatattaaccctattcatactattatactaggcttttaggggtggT
TCAAAACTAGTGGAGGGGGGCTTTTcgtgtaccaccccttaacttttgtt
CTAGAGGGtctttttggttgaaatttggcacacaagatccttgtcacata
aggtaacttttaacgaaaatttttttttgatgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030299-exon-sc0000806-1491911889:124201..124242 | TCONS_00030299-exon-sc0000806-1491911889:124201..124242 | Clytia hemisphaerica | exon |
| TCONS_00030299-exon-sc0000806-1510915933:124201..124242 | TCONS_00030299-exon-sc0000806-1510915933:124201..124242 | Clytia hemisphaerica | exon |
| TCONS_00030299-exon-sc0000806-1575043694:124201..124242 | TCONS_00030299-exon-sc0000806-1575043694:124201..124242 | Clytia hemisphaerica | exon |
| TCONS_00030299-exon-sc0000806-1491911889:126102..126884 | TCONS_00030299-exon-sc0000806-1491911889:126102..126884 | Clytia hemisphaerica | exon |
| TCONS_00030299-exon-sc0000806-1510915933:126102..126884 | TCONS_00030299-exon-sc0000806-1510915933:126102..126884 | Clytia hemisphaerica | exon |
| TCONS_00030299-exon-sc0000806-1575043694:126102..126884 | TCONS_00030299-exon-sc0000806-1575043694:126102..126884 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000806 | supercontig | sc0000806:124201..126884 + |
Blast
The following BLAST results are available for this feature:
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