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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030225 ID=TCONS_00030225|Name=TCONS_00030225|organism=Clytia hemisphaerica|type=transcript|length=1138bp
GGCAGCCGtgattgatatcgaaagtgaatttttttttctttctaaaatcg
agaattttgttattttttataagcacttttttacTTTGGACAAGACTTTC
CTCGGTTGCGAGCCTTAAATAGTTTCTCAgctttatttgtaaaaaatatt
ttccttgctGGATAATTTAGAtaccaaaataattgaaatgtgTTGCGTTA
GAATACAaacgaagctggtaaaactagtttatcGTTATTCTCGGGCTAAA
GTTTCTAAGAAACAATACCATAAAGGCCTCTTCAGTAGGGATAGCGaggt
tgaaaataaaaccttggaggacaaaaaaacaacaacaaatgtcaaagaaa
gaaaaggaaaaaagaaacgATGGCCATTCATGATATTAATGCCAGGAGGT
CATAAATACCATGAAAGCTTTCTTGTAAGAACTTTATGAGTTCTAGACAA
CAAACCATAAAATAATCTTACAATACcattgaaaaaatacaaaaattata
cCGAAGACATCACCAGGGGATTTCCCCAGAtatgttagaaaaaatattta
taaaaacatcgTAAAAATGAGGTAAAAAAAACTATGCATTTCCATCCAAC
CCAGCAAATAATAGTgtataaaaattaaatattcttcCACAGTGTATATC
ATGTATATTTGAATTACAGATTGTCATTgttagtttgtattttttttcag
tgcATGATATGACTTCGCTATTTCTCTGAATATAAATCTTCTTTGCAACT
GCTgcaaaagattaagaacaaaaagacttttcagTATAATTTAACTTCAT
TTATAGGCCTTTAAAACACCTCAAATCAATGTGTATTGCAGAGCATGATG
AAAAATAGATCACCGTTGACTTTACTTGAAGTAAAAAGTTGGATATACAA
TAAAAACGACCAAAGCCTTTCAAACTATGTTCTTGAGTAGTACATCTCAT
ACAGATTTTAAGACTTCAAAGCTGattaaaaattggattattGCTCCATG
AACACTAAATGCAAAAGGTGTTATGACTCCatgctaaaaaaatttaaatc
taaatttgaaaaatatagtttAAAGATAACATCAGACTGAAAATATGaat
ataaatttaaattatagAAGCATTTCTGGCTCTTCCTN Run BLAST on NCBI transcript from alignment at sc0000800:114821..115958 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030225 ID=TCONS_00030225|Name=TCONS_00030225|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at sc0000800:114821..115958 (Clytia hemisphaerica)
NAGGAAGAGCCAGAAATGCTTctataatttaaatttatattCATATTTTC
AGTCTGATGTTATCTTTaaactatatttttcaaatttagatttaaatttt
tttagcatGGAGTCATAACACCTTTTGCATTTAGTGTTCATGGAGCaata
atccaatttttaatCAGCTTTGAAGTCTTAAAATCTGTATGAGATGTACT
ACTCAAGAACATAGTTTGAAAGGCTTTGGTCGTTTTTATTGTATATCCAA
CTTTTTACTTCAAGTAAAGTCAACGGTGATCTATTTTTCATCATGCTCTG
CAATACACATTGATTTGAGGTGTTTTAAAGGCCTATAAATGAAGTTAAAT
TATActgaaaagtctttttgttcttaatcttttgcAGCAGTTGCAAAGAA
GATTTATATTCAGAGAAATAGCGAAGTCATATCATgcactgaaaaaaaat
acaaactaacAATGACAATCTGTAATTCAAATATACATGATATACACTGT
GgaagaatatttaatttttatacACTATTATTTGCTGGGTTGGATGGAAA
TGCATAGTTTTTTTTACCTCATTTTTAcgatgtttttataaatatttttt
ctaacataTCTGGGGAAATCCCCTGGTGATGTCTTCGgtataatttttgt
attttttcaatgGTATTGTAAGATTATTTTATGGTTTGTTGTCTAGAACT
CATAAAGTTCTTACAAGAAAGCTTTCATGGTATTTATGACCTCCTGGCAT
TAATATCATGAATGGCCATcgtttcttttttccttttctttctttgacat
ttgttgttgtttttttgtcctccaaggttttattttcaacctCGCTATCC
CTACTGAAGAGGCCTTTATGGTATTGTTTCTTAGAAACTTTAGCCCGAGA
ATAACgataaactagttttaccagcttcgttTGTATTCTAACGCAAcaca
tttcaattattttggtaTCTAAATTATCCagcaaggaaaatattttttac
aaataaagcTGAGAAACTATTTAAGGCTCGCAACCGAGGAAAGTCTTGTC
CAAAgtaaaaaagtgcttataaaaaataacaaaattctcgattttagaaa
gaaaaaaaaattcactttcgatatcaatcaCGGCTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030225-exon-sc0000800-1491911889:114821..115958 | TCONS_00030225-exon-sc0000800-1491911889:114821..115958 | Clytia hemisphaerica | exon |
| TCONS_00030225-exon-sc0000800-1510915933:114821..115958 | TCONS_00030225-exon-sc0000800-1510915933:114821..115958 | Clytia hemisphaerica | exon |
| TCONS_00030225-exon-sc0000800-1575043694:114821..115958 | TCONS_00030225-exon-sc0000800-1575043694:114821..115958 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000800 | supercontig | sc0000800:114821..115958 . |
Blast
The following BLAST results are available for this feature:
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