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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030200 ID=TCONS_00030200|Name=TCONS_00030200|organism=Clytia hemisphaerica|type=transcript|length=1133bp
AACTCTTATGGGGAACTTTATAAAAATCGCTTCACAGAAGATATTGATTT
GAAAGCTCTTTCTTTGGACATTTCATTGATTCGGAATGAACGAAAACGAG
TTTCAATGAATGAGGGACCTTCTGGTCGAGTTGATATTCCATGGCTTGAG
CTTGAAGATCGTGAATTCGTAGCAGGAGGGGACAGCGAAAAAACTATATC
AGATCTGAGGCAGGAGTATCAGAAACTGATTCGAACTCCAAGACTAGATA
ATGTTGTATTTTTGCTGGATGATCGCATCGTGTTGAACGAAGACCAATTA
ATAGCTGATTTGCTTCTCGATTGTGAATACTTGACCTTAGGTCTTATAGA
GAAGTATTATGAATTAGACCGCGAAGGAAGGCGTTTTTACACTCTACCAC
ATGTTCAATTACTTATTCCACAGATTGACGTAGATACTAACGCTGTTGAG
TATCCTCTATTAGACGTTGGTCACATCAGTTTATCTACCATGAAATCGTG
GATTGAAAGTATCCATCAAATTCCCTGCCAAGAACAAGAGTTGGTATGCA
ATGGGAAGGTCATTTCAAGTGAAAACTTCCCTGGTAAAATGCGTTACCAT
TCACCCGAGCCTAAGATTGTCCAATTGCGCGTCTTTCCAACGCAAGATGA
GAACTTGAACTCTTTTTACCTTCAGAACAATATAAGAACAATGCCAACAG
TCCATTTGACCAGTTTCGACAATGAACGTGAAGCGGAATACTTTTATCAT
GAAGAAGTGGGGAAGACTGTAAACGAGTTCATCGAAGATTCTTTAGAAAT
ACCACAATCAAAACAATATCTCACTATCGACAACAGGAGAGTCTTTCACA
ATGAGCTGGCAAAACTGTTGAGGGAACACAATCTTTCAGCTCCGTTCAAA
GTTAATCTATCCGTGCAAGTGGACGATGGGGCAACGGGGTTGCTATGGAC
ACCGGAGCAATATCGTATCCGTCGAATGCGCCCCGTCATTGTGAAACATC
CGCACACCGACGCCGTCCTTTTCGATATCTCTTTATCCAAATTCAACGAA
AGGCAACCACTTATTAAAGTAATTTCCGATCGCTGCCCAAATTTAGCGGC
AGATTGTATCAGTCTTTTTCACAAGCAGAAAAA Run BLAST on NCBI protein sequence of TCONS_00030200-protein >TCONS_00030200-protein ID=TCONS_00030200-protein|Name=TCONS_00030200-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
NSYGELYKNRFTEDIDLKALSLDISLIRNERKRVSMNEGPSGRVDIPWLE
LEDREFVAGGDSEKTISDLRQEYQKLIRTPRLDNVVFLLDDRIVLNEDQL
IADLLLDCEYLTLGLIEKYYELDREGRRFYTLPHVQLLIPQIDVDTNAVE
YPLLDVGHISLSTMKSWIESIHQIPCQEQELVCNGKVISSENFPGKMRYH
SPEPKIVQLRVFPTQDENLNSFYLQNNIRTMPTVHLTSFDNEREAEYFYH
EEVGKTVNEFIEDSLEIPQSKQYLTIDNRRVFHNELAKLLREHNLSAPFK
VNLSVQVDDGATGLLWTPEQYRIRRMRPVIVKHPHTDAVLFDISLSKFNE
RQPLIKVISDRCPNLAADCISLFHKQK Run BLAST on NCBI transcript from alignment at sc0000797:103970..105102 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030200 ID=TCONS_00030200|Name=TCONS_00030200|organism=Clytia hemisphaerica|type=transcript|length=1133bp|location=Sequence derived from alignment at sc0000797:103970..105102 (Clytia hemisphaerica)
TTTTTCTGCTTGTGAAAAAGACTGATACAATCTGCCGCTAAATTTGGGCA
GCGATCGGAAATTACTTTAATAAGTGGTTGCCTTTCGTTGAATTTGGATA
AAGAGATATCGAAAAGGACGGCGTCGGTGTGCGGATGTTTCACAATGACG
GGGCGCATTCGACGGATACGATATTGCTCCGGTGTCCATAGCAACCCCGT
TGCCCCATCGTCCACTTGCACGGATAGATTAACTTTGAACGGAGCTGAAA
GATTGTGTTCCCTCAACAGTTTTGCCAGCTCATTGTGAAAGACTCTCCTG
TTGTCGATAGTGAGATATTGTTTTGATTGTGGTATTTCTAAAGAATCTTC
GATGAACTCGTTTACAGTCTTCCCCACTTCTTCATGATAAAAGTATTCCG
CTTCACGTTCATTGTCGAAACTGGTCAAATGGACTGTTGGCATTGTTCTT
ATATTGTTCTGAAGGTAAAAAGAGTTCAAGTTCTCATCTTGCGTTGGAAA
GACGCGCAATTGGACAATCTTAGGCTCGGGTGAATGGTAACGCATTTTAC
CAGGGAAGTTTTCACTTGAAATGACCTTCCCATTGCATACCAACTCTTGT
TCTTGGCAGGGAATTTGATGGATACTTTCAATCCACGATTTCATGGTAGA
TAAACTGATGTGACCAACGTCTAATAGAGGATACTCAACAGCGTTAGTAT
CTACGTCAATCTGTGGAATAAGTAATTGAACATGTGGTAGAGTGTAAAAA
CGCCTTCCTTCGCGGTCTAATTCATAATACTTCTCTATAAGACCTAAGGT
CAAGTATTCACAATCGAGAAGCAAATCAGCTATTAATTGGTCTTCGTTCA
ACACGATGCGATCATCCAGCAAAAATACAACATTATCTAGTCTTGGAGTT
CGAATCAGTTTCTGATACTCCTGCCTCAGATCTGATATAGTTTTTTCGCT
GTCCCCTCCTGCTACGAATTCACGATCTTCAAGCTCAAGCCATGGAATAT
CAACTCGACCAGAAGGTCCCTCATTCATTGAAACTCGTTTTCGTTCATTC
CGAATCAATGAAATGTCCAAAGAAAGAGCTTTCAAATCAATATCTTCTGT
GAAGCGATTTTTATAAAGTTCCCCATAAGAGTT Coding sequence (CDS) from alignment at sc0000797:103970..105102 >TCONS_00030200 ID=TCONS_00030200|Name=TCONS_00030200|organism=Clytia hemisphaerica|type=CDS|length=1131bp|location=Sequence derived from alignment at sc0000797:103970..105102 (Clytia hemisphaerica)
TTTCTGCTTGTGAAAAAGACTGATACAATCTGCCGCTAAATTTGGGCAGC
GATCGGAAATTACTTTAATAAGTGGTTGCCTTTCGTTGAATTTGGATAAA
GAGATATCGAAAAGGACGGCGTCGGTGTGCGGATGTTTCACAATGACGGG
GCGCATTCGACGGATACGATATTGCTCCGGTGTCCATAGCAACCCCGTTG
CCCCATCGTCCACTTGCACGGATAGATTAACTTTGAACGGAGCTGAAAGA
TTGTGTTCCCTCAACAGTTTTGCCAGCTCATTGTGAAAGACTCTCCTGTT
GTCGATAGTGAGATATTGTTTTGATTGTGGTATTTCTAAAGAATCTTCGA
TGAACTCGTTTACAGTCTTCCCCACTTCTTCATGATAAAAGTATTCCGCT
TCACGTTCATTGTCGAAACTGGTCAAATGGACTGTTGGCATTGTTCTTAT
ATTGTTCTGAAGGTAAAAAGAGTTCAAGTTCTCATCTTGCGTTGGAAAGA
CGCGCAATTGGACAATCTTAGGCTCGGGTGAATGGTAACGCATTTTACCA
GGGAAGTTTTCACTTGAAATGACCTTCCCATTGCATACCAACTCTTGTTC
TTGGCAGGGAATTTGATGGATACTTTCAATCCACGATTTCATGGTAGATA
AACTGATGTGACCAACGTCTAATAGAGGATACTCAACAGCGTTAGTATCT
ACGTCAATCTGTGGAATAAGTAATTGAACATGTGGTAGAGTGTAAAAACG
CCTTCCTTCGCGGTCTAATTCATAATACTTCTCTATAAGACCTAAGGTCA
AGTATTCACAATCGAGAAGCAAATCAGCTATTAATTGGTCTTCGTTCAAC
ACGATGCGATCATCCAGCAAAAATACAACATTATCTAGTCTTGGAGTTCG
AATCAGTTTCTGATACTCCTGCCTCAGATCTGATATAGTTTTTTCGCTGT
CCCCTCCTGCTACGAATTCACGATCTTCAAGCTCAAGCCATGGAATATCA
ACTCGACCAGAAGGTCCCTCATTCATTGAAACTCGTTTTCGTTCATTCCG
AATCAATGAAATGTCCAAAGAAAGAGCTTTCAAATCAATATCTTCTGTGA
AGCGATTTTTATAAAGTTCCCCATAAGAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030200-exon-sc0000797-1491911889:103970..105102 | TCONS_00030200-exon-sc0000797-1491911889:103970..105102 | Clytia hemisphaerica | exon |
| TCONS_00030200-exon-sc0000797-1510915933:103970..105102 | TCONS_00030200-exon-sc0000797-1510915933:103970..105102 | Clytia hemisphaerica | exon |
| TCONS_00030200-exon-sc0000797-1575043694:103970..105102 | TCONS_00030200-exon-sc0000797-1575043694:103970..105102 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000797 | supercontig | sc0000797:103970..105102 . |
Blast
The following BLAST results are available for this feature:
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