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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030110 ID=TCONS_00030110|Name=TCONS_00030110|organism=Clytia hemisphaerica|type=transcript|length=962bp
TGTCTTGGCATTATCTATCTGAGATACTTTATTCATACATTGTTTCTGGC
TTGGTTGGGACGTTGATTtattcacaaaaacaaacaaactcatATATGGA
TTATACTCTCACTTTCTCATGTGATTGTTgtgattgaaagattttttgat
tatGTATATGGTTATAAACATTCATGacatgttttaacactgggatcttt
taaattttgttggctTGATACGCTGGTAAATCTCTAGTACAAGTGCAATA
CTTATGACATTATGACACAGCTGAGATTCCATGACTATATATGCAGGATA
CTTTTTGCAGGGAATGTTCAATATGTTAATATGCTCACATTCATTGGGTA
ACAGATCACTGCTTTTTTCTATGGGTATATACAAGTTAAACCTGATAACC
TTATCCCAGAGAATGTAACTCCAAAATATGGCTACAGAAATCCTCAAAAA
TTATAACGGAAAGTATGGTATTTATATAACATTTTCGGTGGTGGCAATAC
TGTGCAATATTTTgtggaaatgatgaaaagtgaagtggtaatttggaatt
taaaaattgaCTGCTTTTTATGCGGAAACAATATTCTGACAAGCTGACCA
CTGAGACACATCTTGGTTCTATTTGTGAATGAAAATAACATTGAGATGAC
TGGTTTCCTGGGCTTTCGGATGCCCGTCGTTTAGCTGCAATTCACTACCT
TTGACTCTAAATGTTAGATGTACGAGGAGTTTTGGGTTTTCACTACTGGC
AGACTTCCAGGGGGgagcacttaggcaaaattaagTACGGGGACATGCCG
CtgatcagggtccctttttcagacTCTAGATATATCTGATAGGGTCCCAA
AATTTACCGTgcgattgggtaacttgcatcagtggaggctaacatgcata
gccctcaaatgaaacaCCTGACTGgtcatcaaaatacaaagttaaatcaa
aacaaaaatgNN Run BLAST on NCBI transcript from alignment at sc0000794:140449..141410 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030110 ID=TCONS_00030110|Name=TCONS_00030110|organism=Clytia hemisphaerica|type=transcript|length=962bp|location=Sequence derived from alignment at sc0000794:140449..141410 (Clytia hemisphaerica)
NNcatttttgttttgatttaactttgtattttgatgacCAGTCAGGtgtt
tcatttgagggctatgcatgttagcctccactgatgcaagttacccaatc
gcACGGTAAATTTTGGGACCCTATCAGATATATCTAGAgtctgaaaaagg
gaccctgatcaGCGGCATGTCCCCGTActtaattttgcctaagtgctcCC
CCCTGGAAGTCTGCCAGTAGTGAAAACCCAAAACTCCTCGTACATCTAAC
ATTTAGAGTCAAAGGTAGTGAATTGCAGCTAAACGACGGGCATCCGAAAG
CCCAGGAAACCAGTCATCTCAATGTTATTTTCATTCACAAATAGAACCAA
GATGTGTCTCAGTGGTCAGCTTGTCAGAATATTGTTTCCGCATAAAAAGC
AGtcaatttttaaattccaaattaccacttcacttttcatcatttccacA
AAATATTGCACAGTATTGCCACCACCGAAAATGTTATATAAATACCATAC
TTTCCGTTATAATTTTTGAGGATTTCTGTAGCCATATTTTGGAGTTACAT
TCTCTGGGATAAGGTTATCAGGTTTAACTTGTATATACCCATAGAAAAAA
GCAGTGATCTGTTACCCAATGAATGTGAGCATATTAACATATTGAACATT
CCCTGCAAAAAGTATCCTGCATATATAGTCATGGAATCTCAGCTGTGTCA
TAATGTCATAAGTATTGCACTTGTACTAGAGATTTACCAGCGTATCAagc
caacaaaatttaaaagatcccagtgttaaaacatgtCATGAATGTTTATA
ACCATATACataatcaaaaaatctttcaatcacAACAATCACATGAGAAA
GTGAGAGTATAATCCATATatgagtttgtttgtttttgtgaataAATCAA
CGTCCCAACCAAGCCAGAAACAATGTATGAATAAAGTATCTCAGATAGAT
AATGCCAAGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030110-exon-sc0000794-1491911889:140449..141410 | TCONS_00030110-exon-sc0000794-1491911889:140449..141410 | Clytia hemisphaerica | exon |
| TCONS_00030110-exon-sc0000794-1510915933:140449..141410 | TCONS_00030110-exon-sc0000794-1510915933:140449..141410 | Clytia hemisphaerica | exon |
| TCONS_00030110-exon-sc0000794-1575043694:140449..141410 | TCONS_00030110-exon-sc0000794-1575043694:140449..141410 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000794 | supercontig | sc0000794:140449..141410 . |
Blast
The following BLAST results are available for this feature:
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