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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030030 ID=TCONS_00030030|Name=TCONS_00030030|organism=Clytia hemisphaerica|type=transcript|length=753bp
TGCGGCAAGGTAGTATAAGGTAGTAGGTAActtgaaattgagtaaaaaat
gtttgccaaaattgttaaacatgcatgtacgtttattaagcACCCGAGAG
TAGCGATTTAGTATCTATTCGTTATCgttattaattttcttttaaacttt
TCGACATTTCGAATTGAATGTCTCTGCCACACCacctttttgttgtttta
actTCTCATAATCATGAGGGTGAGCCTTTGATGCCCTTTGCTCGATCCTA
CTCACGCGAGTAGGAGAAAGGGGTTGGTAAATTTTCCTTTGGCCATCTTT
GTTCGATTTTCTCGACTGATATGTGTAGCGATGGCATGCTAAATCAGTCT
CAGTGAAGACCCTCTCCAGttcttttttgataaatgtTTGGGCCCGGTTA
gctgttcttctttttttcgcaGGTGGGAGAGGGCTTTCATCTTCGAtttg
tagattttcattttcattattttgattatCTGAGAAAATTGATATgtcTG
GTGACAGTAATGGGCTCAAATTAATATCAATATCAAGAGGTGGGGTTTGA
CTTTCTACATCATCACGACATTCTACCAGGATATCTACATTAGCCATTGG
CTCCACTGGCTGCTGACTACCACTACCACTGCATACGGATTGGGAATGGT
TTTGATGGGGTTTGTTGTTCGGTTTTATTGgtgatgttgttttttgtttt
tgttttttaaccattattaaattttttatttctttcaccTCGCACCGAAT
GGG Run BLAST on NCBI transcript from alignment at sc0000788:83041..83856+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030030 ID=TCONS_00030030|Name=TCONS_00030030|organism=Clytia hemisphaerica|type=transcript|length=816bp|location=Sequence derived from alignment at sc0000788:83041..83856+ (Clytia hemisphaerica)
TGCGGCAAGGTAGTATAAGGTAGTAGGTAActtgaaattgagtaaaaaat
gtttgccaaaattgttaaacatgcatgtacgtttattaagcACCCGAGAG
TAGCGATTTAGTATCTATTCGTTATCgttattaattttcttttaaacttt
TCGACATTTCGAATTGAATGTCTCTGCCACACCacctttttgttgtttta
actTCTCATAATCATGAGGGTGAGCCTTTGATGCCCTTTGCTCGATCCTA
CTCACGCGAGTAGGAGAAAGGGGTTGGTAAATTTTCCTTTGGCCATCTTT
GTTCGATTTTCTCGACTGATATGTGTAGCGATGGCATGCTAAATCAGTCT
CAGTGAAGACCCTCTCCAGttcttttttgataaatgtTTGGGCCCGGTTA
gctgttcttctttttttcgcaGGTGGGAGAGGGCTTTCATCTTCGAtttg
tagattttcattttcattattttgattatCTGAGAAAATTGATATgtcat
tttcattgttattGTCATGTAAAATTTGATCTTCGAATAAAATGGGCATT
GTCTCTTCGACTGGTGACAGTAATGGGCTCAAATTAATATCAATATCAAG
AGGTGGGGTTTGACTTTCTACATCATCACGACATTCTACCAGGATATCTA
CATTAGCCATTGGCTCCACTGGCTGCTGACTACCACTACCACTGCATACG
GATTGGGAATGGTTTTGATGGGGTTTGTTGTTCGGTTTTATTGgtgatgt
tgttttttgtttttgttttttaaccattattaaattttttatttctttca
ccTCGCACCGAATGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030030-exon-sc0000788-1491911889:83041..83538 | TCONS_00030030-exon-sc0000788-1491911889:83041..83538 | Clytia hemisphaerica | exon |
| TCONS_00030030-exon-sc0000788-1510915933:83041..83538 | TCONS_00030030-exon-sc0000788-1510915933:83041..83538 | Clytia hemisphaerica | exon |
| TCONS_00030030-exon-sc0000788-1575043694:83041..83538 | TCONS_00030030-exon-sc0000788-1575043694:83041..83538 | Clytia hemisphaerica | exon |
| TCONS_00030030-exon-sc0000788-1491911889:83602..83856 | TCONS_00030030-exon-sc0000788-1491911889:83602..83856 | Clytia hemisphaerica | exon |
| TCONS_00030030-exon-sc0000788-1510915933:83602..83856 | TCONS_00030030-exon-sc0000788-1510915933:83602..83856 | Clytia hemisphaerica | exon |
| TCONS_00030030-exon-sc0000788-1575043694:83602..83856 | TCONS_00030030-exon-sc0000788-1575043694:83602..83856 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000788 | supercontig | sc0000788:83041..83856 + |
Blast
The following BLAST results are available for this feature:
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