|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029697 ID=TCONS_00029697|Name=TCONS_00029697|organism=Clytia hemisphaerica|type=transcript|length=1032bp
TTGGAAATTATTTCATCAAATTATATTTACACTTTTTTGGTTATAATCgt
tacaacaaaacaaaaattagtcTTTAAGTGATACttcatatcaaaatttc
ttttaaaaagctttACAACATTGCTAATAATAATACTATATAAttcatca
aatcaaaaaatatgaTATAACGTGTGAAAGATGTTCCAATAAACGTATTT
ATGTGAGAACTAAAATGGAGGGAACGGGAACCCTTTGGGCTACAGATAAA
GTCAAAGACCGATTAGGTTCAATTTAGTAAGGATGATGAACTAACACCTA
CTAGGTTAATAACAAATAAGGCAGAAAGCGACAAATATCCTAGCAGAAAG
AATATCCTAGCAGAAAGAATATCCTAGCAGAAAGAATATCATACTCGCGT
GCATACAGTGTTATACATAAGCATTACAGAGTAGCATTAGGGGTATTAGA
GTTATACAGGCATTGACCTGCACAGAATAGGCCCATTAAAGCTCGATGTG
TTTAGATTCGCACCATTAGTCAATAGTGAAGTTAAgcaaatcggtaaaat
cacgacgacgaacgaaaatttaacaggctagtgagtttcaaccaatcaaa
tttcgtattttcattagcctattacatttttcgtccgtcgtcgtcattat
cctggtatgcttaacctcagtaataaaaataccttaaggcaagaaatttt
tgcgggaacaaatttttgcggtttttcgacAAATCCGCGAAATACAAAAA
TTCTCATGATTTGAACAAAAAATCCtctgaaccgcgaaattaaattccgc
gaaaatctCTTCCCTCACGGTAGTATGTAGTATAAACACCATGTGTATTA
TTGAGTAACATAGCGATTATACGGTGTGCATTATAGAGGGTAATACGTAT
ATCATAATAATTTAATTGGTCATCATTcaataaaaatcttcaaatataaA
TCTAAACTAAACCATGCTAAAATCTAAAGCACAGAACAGAACGAATAGAA
CAATATGCTTGTTCCAAATATGCTAAGCTTAA Run BLAST on NCBI transcript from alignment at sc0000763:137261..138292 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029697 ID=TCONS_00029697|Name=TCONS_00029697|organism=Clytia hemisphaerica|type=transcript|length=1032bp|location=Sequence derived from alignment at sc0000763:137261..138292 (Clytia hemisphaerica)
TTAAGCTTAGCATATTTGGAACAAGCATATTGTTCTATTCGTTCTGTTCT
GTGCTTTAGATTTTAGCATGGTTTAGTTTAGATttatatttgaagatttt
tattgAATGATGACCAATTAAATTATTATGATATACGTATTACCCTCTAT
AATGCACACCGTATAATCGCTATGTTACTCAATAATACACATGGTGTTTA
TACTACATACTACCGTGAGGGAAGagattttcgcggaatttaatttcgcg
gttcagaGGATTTTTTGTTCAAATCATGAGAATTTTTGTATTTCGCGGAT
TTgtcgaaaaaccgcaaaaatttgttcccgcaaaaatttcttgccttaag
gtatttttattactgaggttaagcataccaggataatgacgacgacggac
gaaaaatgtaataggctaatgaaaatacgaaatttgattggttgaaactc
actagcctgttaaattttcgttcgtcgtcgtgattttaccgatttgcTTA
ACTTCACTATTGACTAATGGTGCGAATCTAAACACATCGAGCTTTAATGG
GCCTATTCTGTGCAGGTCAATGCCTGTATAACTCTAATACCCCTAATGCT
ACTCTGTAATGCTTATGTATAACACTGTATGCACGCGAGTATGATATTCT
TTCTGCTAGGATATTCTTTCTGCTAGGATATTCTTTCTGCTAGGATATTT
GTCGCTTTCTGCCTTATTTGTTATTAACCTAGTAGGTGTTAGTTCATCAT
CCTTACTAAATTGAACCTAATCGGTCTTTGACTTTATCTGTAGCCCAAAG
GGTTCCCGTTCCCTCCATTTTAGTTCTCACATAAATACGTTTATTGGAAC
ATCTTTCACACGTTATAtcatattttttgatttgatgaaTTATATAGTAT
TATTATTAGCAATGTTGTaaagctttttaaaagaaattttgatatgaaGT
ATCACTTAAAgactaatttttgttttgttgtaacGATTATAACCAAAAAA
GTGTAAATATAATTTGATGAAATAATTTCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029697-exon-sc0000763-1491911889:137261..138292 | TCONS_00029697-exon-sc0000763-1491911889:137261..138292 | Clytia hemisphaerica | exon |
| TCONS_00029697-exon-sc0000763-1510915933:137261..138292 | TCONS_00029697-exon-sc0000763-1510915933:137261..138292 | Clytia hemisphaerica | exon |
| TCONS_00029697-exon-sc0000763-1575043694:137261..138292 | TCONS_00029697-exon-sc0000763-1575043694:137261..138292 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000763 | supercontig | sc0000763:137261..138292 . |
Blast
The following BLAST results are available for this feature:
|
