TCONS_00029686 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029686
Unique NameTCONS_00029686
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2904

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029686 ID=TCONS_00029686|Name=TCONS_00029686|organism=Clytia hemisphaerica|type=transcript|length=2904bp
ATGATGTTTCAAATTATGATGATCAAAGATCAGACAGGCAGGGCAGGATC
ACAATTCATGtgaattttaatgttttatagCAGGTGGCCTCCTCAGCACA
AAACTCTGTGGAAAAAAATAGCACCTCAAAACTGATGTATTAAGTCATTG
ATTTGAAACGTAGAACATATGTAAGAGAGCAAATGGGTAGAAATATTCGT
TATTGACTTACCATTTTgacttgatttttttgaaagtgtcagCAAATGTG
CCCAATCTTTTACGTTTGCCCTCTCGCGGCAATCATATGAGCTGTTCTTC
GCAGAGGCTCTTTCCGAAGCTGGACAAGATGATGTAATAAAGTAACACCG
AAAAGCTCTGCGGTGAAGTTTGTTTGTGAATATTATGataaactttgaaa
atggtAGATGAAGCCGTGAAACATTTTTGTCAAGGTTGATCGATTGCAGT
AAGTCGGGGTCAacttgaatatatttttagatcCGTTAAATTGTACTACA
TTTTTCGATAACCAGATATAACAAGGGCACAATGGGACATCTGTTATATT
GGTGTAGGATGATTTACAACCTTTGAAGTTCTTACTAGTTGAACCCAACT
GCACTCGATTAGAGGAGACGAAAACGAAAGCCATTTTACACTGACTAGGT
TCTGGGAGATCGTGTTGTGCCAATGTTTTTTAGATGAAGTCATCATTGTA
CCAgtatattttttcaatctttataCTTAATTTGAGACTTGTTATCTTGT
CTGCCTCAAGCAATCAGGTTCAAGAAAAGCAAAGTGTGACGAACTacttg
aattttcaaaacaaagctgCTTATTTTAGCGAGATCTGCCAAGAAAATAT
CCATCTACCTGGAAGTACTTGTTCCCAGTTGAAACCGGACTGTCTACAGT
GTATCTATGATAAGGATTGTGTTTATGGTAACAGCACTATAGGAAATTGT
ACTGTTCCCCAAGAAATTGATTGCAAGggaGAAAGAAAGTTTTCTGTGGA
ACTGAATTGTCGCTATTGCTATCAACTACCACCCGAATATCATAATTGTG
GACCAAGAGCCTTTTGCCAGGTCACTTCAACAGGACGAGAGAGGCAGATT
GTCAATTGCACCGTAAATCGAGAAACACACTGTCTAGGACGGAGGACATT
TTCGAAATCATTTCGTTGTAATTGGACTTCAGGAAAACGTTGGTCTACTA
GTCTTCTACTGAGtatcACAGTTGGTGGCTTCGGCGTTGATCGATTCTAT
CTTGGTCATTGGCAAGAAGGTCTTGGGAAACTTTTCAGTTTCGGTGGTCT
CGGCGTATGGACTTTAGTTGATATCGTATTGATCGCTGTTGGTTACATAA
CACCAGCTGATGGCTCATTATATATTTTCTAATGTTTCGTTTGCATTCGT
AGTGTTTTTAGCGACCGCCCGCTTGAGCTTAGCGGACGAACAATCTAGCC
TAGTAGATGAACACATTGATGAGGGAGTGATAGACTTACTGGAAAAAGAA
ATGGACAAGCTAGTAAAGGAAggcaatcaaaatcaaaaggtAGAGGAGAG
CGTTGGTAATTATTTCGAATCTTATGTTGATGGTTATCAGATGCCAGAGG
AGATTGCACAGTCAGCAAATAAGGAAGATGATACTAAAGATCCTTCTCTA
GAGGGAACCAAACAAAATATCGATAATGAAACTTCGGCGAACATGAACGA
TTCTTCAAACGTACCATCACATCGATGGCCATGCAAGCCGTTCAATATAA
CAGTTCGAAATGAAAATAACACTAATACGACTTTTACCGGCCATTCAAGT
GCCGTTATCATAAATAATGAAACTGAATTTTCAAGTATCTTTGCTCGCAT
GAATTCGACGCATGGGTGTGGTTTATTGTTGTTTTACAGTCCACATTGTG
AGTTCTGCACCAATTTGGCGCCTCTTTATAACGCTGTTGGCCGGTCGTAT
CCAGATCTCGCGGTGATGGCGGTCAACGTTCAAGAAACCATGCGAATGGC
TGCAGGTTATGGAGTAGTTGGTATTCCCACTATCTTCTTCTTTTACAGTG
GCCGACCGGTATCTAAATTCAATCAAAGCCGGAACACGGCCAGTTTCCGT
AAATTCGTCCGGGACTTGTCGGGTTTTGAACCGATCACATCAGATTTGAA
TATTACAGATGCTGATCGAGAGGGGCCTATTGAAACTAGAGTTGTCGAGA
CACGTGACTATTATCTGATGTTTTCAGTGTGTTTTCTTGTTTTGTATTTA
GTGTTTCGGTTTTTGGGACAGAAGTTACTGGCGATTTGTATGTATGCTTA
TGATAGCATCAAATCGATCGATTTTTGGACACGACCCACATCGCCTGAAG
AGGAAAAGGAGAAAACTGATTAGTTTTTTTAATGTAGTGTAAACAGGTCT
TTCAGGTTTGGCAAAACCGTGTAACTTTGTAGGTCCGAAAAgacatttga
tttttaaaaagagattcCTCGTGCAAATCCAATGACGAAAACTATGTTAC
TTTCTCAAACCTGAAAGAACTTCTTGTTTTTACAATTACTATTAAAAGTA
CGAGATTTGTGACATTTTCGATATTCGATAACTCACTTCTTACCCATACA
AGAATTACCTTTTCAGTCACTCAGATGGAAGTTTGATAAattactcatca
atttttttgacctttttctctttaaagacaaaaatatgttttttttccct
ctttctgatcatcttgctccacatccgtgtcaatcctggtcaatccaatg
tgaaaaagcttgtgaattaaaattgatgagttttttaaattgaacgatat
cactcttattctcaacttcagttgagctacaatctgacaatgtctgtctg
tctgtgtgtgtgtctgtctgtctgtcacaaaaactttagggcagcctgga
gact
Run BLAST on NCBI

protein sequence of TCONS_00029686-protein

>TCONS_00029686-protein ID=TCONS_00029686-protein|Name=TCONS_00029686-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MAHYIFSNVSFAFVVFLATARLSLADEQSSLVDEHIDEGVIDLLEKEMDK
LVKEGNQNQKVEESVGNYFESYVDGYQMPEEIAQSANKEDDTKDPSLEGT
KQNIDNETSANMNDSSNVPSHRWPCKPFNITVRNENNTNTTFTGHSSAVI
INNETEFSSIFARMNSTHGCGLLLFYSPHCEFCTNLAPLYNAVGRSYPDL
AVMAVNVQETMRMAAGYGVVGIPTIFFFYSGRPVSKFNQSRNTASFRKFV
RDLSGFEPITSDLNITDADREGPIETRVVETRDYYLMFSVCFLVLYLVFR
FLGQKLLAICMYAYDSIKSIDFWTRPTSPEEEKEKTD
Run BLAST on NCBI

transcript from alignment at sc0000763:31250..44720-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029686 ID=TCONS_00029686|Name=TCONS_00029686|organism=Clytia hemisphaerica|type=transcript|length=13471bp|location=Sequence derived from alignment at sc0000763:31250..44720- (Clytia hemisphaerica)
ATGATGTTTCAAATTATGATGATCAAAGATCAGACAGGCAGGGCAGGATC
ACAATTCATGTGAATTTTAATGTTTTATAGCAGGTGGCCTCCTCAGCACA
AAACTCTGTGGAAAAAAATAGCACCTCAAAACTGATGTATTAAGTCATTG
ATTTGAAACGTAGAACATATGTAAGAGAGCAAATGGGTAGAAATATTCGT
TATTGACTTACCATTTTGACTTGATTTTTTTGAAAGTGTCAGCAAATGTG
CCCAATCTTTTACGTTTGCCCTCTCGCGGCAATCATATGAGCTGTTCTTC
GCAGAGGCTCTTTCCGAAGCTGGACAAGATGATGTAATAAAGTAACACCG
AAAAGCTCTGCGGTGAAGTTTGTTTGTGAATATTATGATAAACTTTGAAA
ATGGTAGATGAAGCCGTGAAACATTTTTGTCAAGGTTGATCGATTGCAGT
AAGTCGGGGTCAACTTGAATATATTTTTAGATCCGTTAAATTGTACTACA
TTTTTCGATAACCAGATATAACAAGGGCACAATGGGACATCTGTTATATT
GGTGTAGGATGATTTACAACCTTTGAAGTTCTTACTAGTTGAACCCAACT
GCACTCGATTAGAGGAGACGAAAACGAAAGCCATTTTACACTGACTAGGT
TCTGGGAGATCGTGTTGTGCCAATGTTTTTTAGATGAAGTCATCATTGTA
CCAGTATATTTTTTCAATCTTTATACTTAATTTGAGACTTGTTATCTTGT
CTGCCTCAAGCAATCAGGTTCAAGAAAAGCAAAGTGTGACGAACTACTTG
AATTTTCAAAACAAAGCTGCTTATTTTAGCGAGATCTGCCAAGAAAATAT
CCATCTACCTGGAAGTACTTGTTCCCAGTTGAAACCGGACTGTCTACAGT
GTATCTATGATAAGGATTGTGTTTATGGTAACAGCACTATAGGAAATTGT
ACTGTTCCCCAAGAAATTGATTGCAAGGTGAGCTTTTCCTGATCCATGAT
CCTGTTGTTCTGTTGTTGATTAATAAAGTTTCATCATCCATGCGTGTTAT
GTGAGTGACGTCCATACTCATTCACTTTGCAAGGACAATTTGACATGCTG
ACTTTTTACCCATTCACCTTCCTAAAAGGCCTAACTATAACATCTTGGTG
GCAATGAACAAATTTACTACATAAATAAAAGCAAGAACCATTTGGTTTGC
TGCCTAAATTGTTGGCTACAATGGAATGTCTTCAGTCCTCTAGCCCTAGT
TTCTAATCCTGATATAGGAGATCAAGCTTTTAGACTGCAATGGCAAACAG
TCTAAGCTTAAACTCTTGTATCAGGATTAGAGGGCTTGTCTTGATGCAAG
AAGTTGGATTGTCAACAAAGTGCTGTAAAAAATCATTGAATATATAAAAG
AAGAACTTTAAATCTTATAAAATATTTTCATTTTGAAGAATTGGTGCAAA
AAAGTGAAACATGGGGAAAAGTTTCATTTTTTATTGGTTCAATCAAAATA
GGGGATTTGGAAAACTTTCTATGTTTGGCTTTTTGCACAAACCCCTGTAA
CTATGGGCGAGCACTCCGTTAAACTGCATAGCCCTAATTTCACACCAAAT
TCTCCAATGAACCAAAATATTATATTTTTTGGTCAAAAACCGACATAGTT
TTTTAAAGCATTTTGAGCTGAAAATTCTATAAAGTATTAAAAAGCCCCTT
TTTCCTAACCCGATAACAGCTGTTTGTAATTTTTTTACGCACACGGTAAA
CCTCTGAAGGCGCTTGAAAATTATACATCTGAGGAAAATAGTCCTCCCGC
GGAAAATTCTACAACAAGAATCTTGTTGTGTGCCGGAAAGTTAAAAACTT
GATACGGCACCCTATTCATAAACACAATCACGCAACTTTGTTGTCGTTCC
TAGTCCTTTTAGATAAACGCGGTCCTTACGATTTCGAGGTTGCATATTCG
TCAGATTGTCAGTTTTCACACATCCCTTTAGAGCTTCAGCGTGGTGTGCA
GAAAACATTCACAATCTGCAGGCAATATTTTAGAAAAGCAAGACAGCGTC
CGTCGGTGGCCAAAAAGGGCACTTTTTCCAGAAAAAAAGGCTGTTTTTAC
GAATATTCTAGTAATTTCAAGATGGGCAGCGTCTGATAACCGGCCGCTTA
AAAGGCATGAAAAATGGCCTGATCTGATCTCAGGTTACTTTTTCCTGATT
TTATGTCCTGAAAATACTCCCAGAACTGTACCAAAAAAATATAAAAGCCC
CATCCAACTTTGCGTCTTTCTTTTAAAATGGCCTCAAAAATGCAACATTT
ACGACAAAAAACTCCAAAATTCCAACTTTGCGCTGCCATTTTGAAAAATC
AGAAAGGTTGATGGTTCCCATTTTCTGTTTTCCAGCAGTAAACTGAGGAT
ACTTTTGGGAACTGAAAAGCTCTTTTCAATTTTGATTTTCTCCATTTTGA
GATTTTTGCAAAAATGGCTCAAACTTTGTAGCGCAGTTTAAAAACCTGGT
TTTGAGCCATGGTTTTTAAACAACCAGTTATCTGTTTGTTATGATTTTTA
CATTTTTCTATTAAAAGTTGTACATATTTTCAGATTCTCAAGTTGAGAAT
ATTGTTTCTGTTATCATTCAAGCACAATTTGAGGTCAAAATCCCAATATA
TTTAGCAAAAGTTGTGATTTTTTGTTGGCTGACACCGCTCAACTTTGAAA
TTTTAAACCACCAATCTGAACCACTGGGATAATTCATTGAGGAACTTTTA
CAACATTCCTCAATATTTCTCTCAAATGTGACAAGTCTAACAAGCCAGTC
TCAAGTATCTGATTCCTGGGTAACTGAAGGTTGTTCTAAAGATCTTGTAG
ATTTTTGGCTATGCAAGGCTTTCTTAGTGCTTGTAGATGGATATAGAAAT
TTAGGGGGGAGTCAATTTCTGAATCTCAGTAACATGTCAGTATACAATGC
CAACTGTAGAAAAAAATATATTTTGATACAGAATTTGGGAACTGGAAAAA
AGTCAGGAAAGTAATCAGGGATGTTCAAATCTTATCAAACTTGTTTTTTT
TTTCATTTTAGGGAGAAAGAAAGTTTTCTGTGGAACTGAATTGTCGCTAT
TGCTATCAACTACCACCCGAATATCATAATTGTGGACCAAGAGCCTTTTG
CCAGGTGATTACTAGACAAGCAAAGCGAAATTCACAGTATATAAAAATTG
TTTAGAACTTGTAATTTCATGTATTTCATGTGCCTGAAAAGGAAAATAAG
TTTTTATCCCCCTGGGCTAGATATGGCTAACCCATGATACATATTTTGAC
AAAAAATATTTTTGCCTTTAATTCAGTATCCAAAGCTCTACCGTTTCAGA
AAGGTTTTTCCGTCTCCAAATTAAACTAAATTCTGCAAAATTTGAAGGAT
CTATGTCTAATCTGTTGTTTATTTTGTCTGAGACAAAAAACTTCGCTTTA
GCCACTGTTTATTGGATCTCCTCCTCCCCTAAAAGCTCAATTCAGGAAAA
TCTTTAATCCCTTTATAAAAGGCCTTTCTTGAAAGGTCTGATCCTCCTTT
TATAAAGACTATGACTATAAGACTACTACTTGTTTATGTCAGATCTGTCT
CAAAATTCAAATAGTCTGATTGGGTGAAATCCTTCTTCTGGCTTTAAAAA
TGAAAATTCTGTTTTGAATTTTGTTTATAATTTTTTATACTGTCAGGTCA
CTTCAACAGGACGAGAGAGGCAGATTGTCAATTGCACCGTAAATCGAGAA
ACACACTGTCTAGGTATACATTTTCAGTTAAGTTTTCTGCACTGATCATC
TTTTGTAAAGTATGCCTCTCTGAATAAACTGCCTAACCGCAGGGATCCCA
CTCCTCCTAAAATTCCTAAAAATCCTAAAATAAGTCAAAACTCCTAAAAT
CCTCCTAAAACTCAACAAATTCTCCTAATATCCTAAAATCTGAAAACTTT
ATCAAGCACGACGGTAGCTGATTATGTTTGTATATTTGTATAATCAGACA
AGAAACTAAGATTTTTTTTCTCATTAAAGTCAAAACAAACTGGGAGTAGT
CAGCTACCTGACCTTGAAACAACATGTTTAAAATATATTTTTGCACTGAA
ATATTTGGAACAAAAGCCTATGTTTATTGAAAGAGTGCAGACTTTATTCA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAACAAAGAGGGCTCAAATGTTTAA
GAGCAAGGTTTGGTGGTTTGCGCCCTCATCTGTGAATTTTTTACTTGAGC
ATAGAATGCACCCCCCTGAACTTAGGGGGGGGGCTAAATCATTTTTGCTT
GATTGGGGGCTGTATTAAAAAAAAAAATACTGGGGCTAGCTTGCTAGGGG
GTTGAGTGTTAAGTAATAGAACTGGGGTCAGAGCTGATAGGTTACAAATA
TTTTAAATTATGCTAAAAATCTATGCTGTGGGGAAGGTTTTGACCCGTCT
TAAAAAATGCCTGCGGCGCAATAAATTTATTAACAATTTGCATATAAATT
TCTATGATATTTTGTTTTGTGAAAGTGGAGGCTAAGTTTTAAGAGTTTTT
CTGGGGCCTTTTTTCCTTAGCCTCCCCCTGAAAAATGCTGGGGGCCGGAC
CCCTCTGCACACTATGGCATAGGCTTTGTTAGAACGAATAATATGATACG
TAAAGTAATTTTATTTCAGTCTTCCTGTGGGTGATTTTTTTTCGGTAGAA
CATCTTTCTAATGGCTGACTTCAGGTCGATTTTAGAAATTTATTTCTTAA
ATTTTCCTAAAATCCTCCTAAAAAATTGATTATTCTCCTAAAATTCTCCT
AAAATTTGTCCTAAAATTAAGATAGTCAGGCGTGGGATCCCTGCTAACCG
AGTCTTTTGTAAAGAAGTAAAGCTTTTTCCCCTCCATCAATCTGCATTTA
TGTCAAATCTCTTCATTTGAAAAATATTTCCAGGTCTACCTCCCAGAAAT
TTGAAGTTATCTAGAAAAAAATTGTTAAAAAAGCCAGGTACCTTTCCTGG
AAGTATTCTTAAATTTAGGGAACACCTGATATGTTTAAAGTTCATTAATG
GGGACGGGGGCTGTTGTTTTTGTATGAAGTATTTTCCTTGGCTAACCAAA
TTTTCCAATTTTGAATTGAACCATTTCATTCAGAAGACTTTATAAAAAGG
GGGTAAGTCAAAGTTGGGGGGGGGGGGGCTACTTTAGAATTCTAAAAATT
TTGGGGGTACCTGAACCCATGGAGGACCCTATCATTTGTCGAATAAAGCA
ACAGCTTTGAAGCTGAAAATTAGACAATTTTTTTATGAACGAATGAAATA
TTTATATTTTCTACACTTGTTTTACAGGACGGAGGACATTTTCGAAATCA
TTTCGTTGTAATTGGACTTCAGGAAAACGTTGGTCTACTAGTCTTCTACT
GAGGTATGACGTCTGACCGTTTTTATTTTTGATACGTCGTTTGATCCGTC
AAATGGCAGTTCTTTTGGCCCGTCAAATGGCAAAATCCGTCGGCCCAACA
TTTAGAATCAACAATCATTTGATACAGAAATTTTCATGAAAAAGCGGAGG
GATGGAAAGGAGAGGGTACAATCATTGACAAAACCTATGGCACAAAGCCC
AAAAATGAGTTCCCTTCCCCTCTCCCCCCAAACAATGTTGTCGGAGGGGG
CTGAAGACCGACCAAGCAATATTTCTTTCCCAGCAACATTGTTCGGAGGG
GAGGGGGAGTTTATTGCCCTGTGTCTAAATTTGACGGCCAGAAATGTGTC
ACAATATATTGGCAACGATTGTAGTTTAAATAAACCAGCTGCGCTGGAAG
CTCCGGCTTAAGAGATTAAAAGATGTGAAGAATGAGTTTGTTGAGTTGTG
TTAGAACGTTGCCCACAAACTAATNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTGTTGGGATAATCCTTGGT
GGAGGAGAGTAGGATAATCCAAATAAAATGGTACAATAGTGTGTATGTAA
TAAATAGTGGTATATTTGGAAAAAAACCTGTCTCGGGTTTGAAAAATCTT
CAAAAGGAACGGTCACCCGCAACCAATGAAATTACGACAAAGTCCAAAAA
ATATCATTTTCAGTTATAACACTGTGAAAATTTCTCCGATCTTGTTAAAG
TTTACACAGGAATTGTGTTTTAGTATCCTTTACTGAATTCTCATAGTGAT
ATAATTTTAAAAAATCTGTGTCGGGTTTGAAAAATCAAAAGGAACGGTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNCTAGCAGTCCACTTTCGGCAGCCATGTTTTTCTAAA
TACTTTTCGGCCAATCAAATCACAGTATTATCGGAATCAGTGATCCGTTT
TTGTTAAATCGGAATAGATTATCGGATTAGATAAACAGACAAAAAATGTC
TTAACCCTTGTCGGAAGAGAGAATTAAAGGCTCCTAGGCCGGAGCAAAAA
GGGGATAGTTTAAGAAGGGGGGCTTACATATATATTGTAGATTATTTTCA
AGCACTGCTATGAAATTTGTTCTTCGTGAAAGGAAGTTTTCTGTCAGAGT
AGTCTGAGTCAAAAAGAAGAAAGAAGTTTATTATTTCGCTATCTCTCTCT
AAAGATATTTCACATATATTTGTTAGCTATTTTTGTCTAAAATCCTTGGG
GGATAGGTATTTTTAAAGGATGGGGGATGCCAAGAAGGGGGAGGGGGGTC
AAACCTCTTTCCACACTATGTAAACTTTCCTCTCGGGTCATAATTTACAA
GGTAAAAACAAATTTTGGCTTTTTAGGCTGCTTTTAATATTCTAATAAAG
ACATGTCATTAAACCTTTTTTTCTTTTTAGTATCACAGTTGGTGGCTTCG
GCGTTGATCGATTCTATCTTGGTCATTGGCAAGAAGGTCTTGGGAAACTT
TTCAGTTTCGGTGGTCTCGGCGTATGGACTTTAGTTGATATCGTATTGAT
CGCTGTTGGTTACATAACACCAGCTGATGGCTCATTATATATTTTCTAAT
GTTTCGTTTGCATTCGTAGTGTTTTTAGCGACCGCCCGCTTGAGCTTAGC
GGACGAACAATCTAGCCTAGTAGATGAACACATTGATGAGGGAGTGATAG
ACTTACTGGAAAAAGAAATGGACAAGCTAGTAAAGGAAGGCAATCAAAAT
CAAAAGGTAGAGGAGAGCGTTGGTAATTATTTCGAATCTTATGTTGATGG
TTATCAGATGCCAGAGGAGATTGCACAGTCAGCAAATAAGGAAGATGATA
CTAAAGATCCTTCTCTAGAGGGAACCAAACAAAATATCGATAATGAAACT
TCGGCGAACATGAACGATTCTTCAAACGTACCATCACATCGATGGCCATG
CAAGCCGTTCAATATAACAGTTCGAAATGAAAATAACACTAATACGACTT
TTACCGGCCATTCAAGTGCCGTTATCATAAATAATGAAACTGAATTTTCA
AGTATCTTTGCTCGCATGAATTCGACGCATGGGTGTGGTTTATTGTTGTT
TTACAGTCCACATTGTGAGTTCTGCACCAATTTGGCGCCTCTTTATAACG
CTGTTGGCCGGTCGTATCCAGATCTCGCGGTGATGGCGGTCAACGTTCAA
GAAACCATGCGAATGGCTGCAGGTTATGGAGTAGTTGGTATTCCCACTAT
CTTCTTCTTTTACAGTGGCCGACCGGTATCTAAATTCAATCAAAGCCGGA
ACACGGCCAGTTTCCGTAAATTCGTCCGGGACTTGTCGGGTTTTGAACCG
ATCACATCAGATTTGAATATTACAGATGCTGATCGAGAGGGGCCTATTGA
AACTAGAGTTGTCGAGACACGTGACTATTATCTGATGTTTTCAGTGTGTT
TTCTTGTTTTGTATTTAGTGTTTCGGTTTTTGGGACAGAAGTTACTGGCG
ATTTGTATGTATGCTTATGATAGCATCAAATCGATCGATTTTTGGACACG
ACCCACATCGCCTGAAGAGGAAAAGGAGAAAACTGATTAGTTTTTTTAAT
GTAGTGTAAACAGGTCTTTCAGGTTTGGCAAAACCGTGTAACTTTGTAGG
TCCGAAAAGACATTTGATTTTTAAAAAGAGATTCCTCGTGCAAATCCAAT
GACGAAAACTATGTTACTTTCTCAAACCTGAAAGAACTTCTTGTTTTTAC
AATTACTATTAAAAGTACGAGATTTGTGACATTTTCGATATTCGATAACT
CACTTCTTACCCATACAAGAATTACCTTTTCAGTCACTCAGATGGAAGTT
TGATAAATTACTCATCAATTTTTTTGACCTTTTTCTCTTTAAAGACAAAA
ATATGTTTTTTTTCCCTCTTTCTGATCATCTTGCTCCACATCCGTGTCAA
TCCTGGTCAATCCAATGTGAAAAAGCTTGTGAATTAAAATTGATGAGTTT
TTTAAATTGAACGATATCACTCTTATTCTCAACTTCAGTTGAGCTACAAT
CTGACAATGTCTGTCTGTCTGTGTGTGTGTCTGTCTGTCTGTCACAAAAA
CTTTAGGGCAGCCTGGAGACT

Coding sequence (CDS) from alignment at sc0000763:31250..44720-

>TCONS_00029686 ID=TCONS_00029686|Name=TCONS_00029686|organism=Clytia hemisphaerica|type=CDS|length=1014bp|location=Sequence derived from alignment at sc0000763:31250..44720- (Clytia hemisphaerica)
ATGGCTCATTATATATTTTCTAATGTTTCGTTTGCATTCGTAGTGTTTTT
AGCGACCGCCCGCTTGAGCTTAGCGGACGAACAATCTAGCCTAGTAGATG
AACACATTGATGAGGGAGTGATAGACTTACTGGAAAAAGAAATGGACAAG
CTAGTAAAGGAAGGCAATCAAAATCAAAAGGTAGAGGAGAGCGTTGGTAA
TTATTTCGAATCTTATGTTGATGGTTATCAGATGCCAGAGGAGATTGCAC
AGTCAGCAAATAAGGAAGATGATACTAAAGATCCTTCTCTAGAGGGAACC
AAACAAAATATCGATAATGAAACTTCGGCGAACATGAACGATTCTTCAAA
CGTACCATCACATCGATGGCCATGCAAGCCGTTCAATATAACAGTTCGAA
ATGAAAATAACACTAATACGACTTTTACCGGCCATTCAAGTGCCGTTATC
ATAAATAATGAAACTGAATTTTCAAGTATCTTTGCTCGCATGAATTCGAC
GCATGGGTGTGGTTTATTGTTGTTTTACAGTCCACATTGTGAGTTCTGCA
CCAATTTGGCGCCTCTTTATAACGCTGTTGGCCGGTCGTATCCAGATCTC
GCGGTGATGGCGGTCAACGTTCAAGAAACCATGCGAATGGCTGCAGGTTA
TGGAGTAGTTGGTATTCCCACTATCTTCTTCTTTTACAGTGGCCGACCGG
TATCTAAATTCAATCAAAGCCGGAACACGGCCAGTTTCCGTAAATTCGTC
CGGGACTTGTCGGGTTTTGAACCGATCACATCAGATTTGAATATTACAGA
TGCTGATCGAGAGGGGCCTATTGAAACTAGAGTTGTCGAGACACGTGACT
ATTATCTGATGTTTTCAGTGTGTTTTCTTGTTTTGTATTTAGTGTTTCGG
TTTTTGGGACAGAAGTTACTGGCGATTTGTATGTATGCTTATGATAGCAT
CAAATCGATCGATTTTTGGACACGACCCACATCGCCTGAAGAGGAAAAGG
AGAAAACTGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016962XLOC_016962Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029686-exon-sc0000763-1575043694:43744..44720TCONS_00029686-exon-sc0000763-1575043694:43744..44720Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1575043694:41567..41659TCONS_00029686-exon-sc0000763-1575043694:41567..41659Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1575043694:40958..41024TCONS_00029686-exon-sc0000763-1575043694:40958..41024Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1575043694:39218..39293TCONS_00029686-exon-sc0000763-1575043694:39218..39293Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1575043694:31250..32940TCONS_00029686-exon-sc0000763-1575043694:31250..32940Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1510915933:43744..44720TCONS_00029686-exon-sc0000763-1510915933:43744..44720Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1510915933:41567..41659TCONS_00029686-exon-sc0000763-1510915933:41567..41659Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1510915933:40958..41024TCONS_00029686-exon-sc0000763-1510915933:40958..41024Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1510915933:39218..39293TCONS_00029686-exon-sc0000763-1510915933:39218..39293Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1510915933:31250..32940TCONS_00029686-exon-sc0000763-1510915933:31250..32940Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1491911889:43744..44720TCONS_00029686-exon-sc0000763-1491911889:43744..44720Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1491911889:41567..41659TCONS_00029686-exon-sc0000763-1491911889:41567..41659Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1491911889:40958..41024TCONS_00029686-exon-sc0000763-1491911889:40958..41024Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1491911889:39218..39293TCONS_00029686-exon-sc0000763-1491911889:39218..39293Clytia hemisphaericaexon
TCONS_00029686-exon-sc0000763-1491911889:31250..32940TCONS_00029686-exon-sc0000763-1491911889:31250..32940Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029686-proteinTCONS_00029686-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000763supercontigsc0000763:31250..44720 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.7732	25.3821	17.3032	15.5669	23.7417	18.446	19.7308	19.1824	15.7498	16.4475	22.7442	19.4254	25.3793	29.2926	22.9848	21.4076	18.8589	22.9018	25.8586	24.3702	20.3805	21.2114	24.4801	24.0995	25.8855	26.675	15.2934	19.82	18.6786	20.4362
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
Blast
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BLAST of TCONS_00029686 vs. Swiss-Prot (Human)
Match: TM2D3 (TM2 domain-containing protein 3 OS=Homo sapiens GN=TM2D3 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 7.719e-48
Identity = 102/231 (44.16%), Postives = 132/231 (57.14%), Query Frame = 3 
Query:  717 IFILNLRLVILSASSNQVQEKQSV-----TNYLNFQNKAAYFSEICQENIHLPGS-TCSQLKPDCLQCIYDKDCVYGNSTIGNCTVPQEIDC-----KGERKFSVELNCRYCYQLPPEYHNCGPRAFCQVTSTGRERQIVNCTVNRETHCLGRRTFSKSFRCNWTSGKRWSTSLLLSITVGGFGVDRFYLGHWQEXXXXXXXXXXXXVWTLVDIVLIAVGYITPADGSLYI 1376
            + +   +  ILS         QS+     T       +AA  +EI    +  P +  CS+L  DC+ C  +  C YG     +C V   + C     K ++ F + + CR+C+QLP   + C     C   S  R+R   NCTV    HCLG RTF K   CNWT G +WST+L LSIT+GGFG DRFYLG W+EGLGKLFSFGGLG+WTL+D++LI VGY+ PADGSLYI
Sbjct:   17 VLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAESTEIPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFIINMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 247
The following BLAST results are available for this feature:
BLAST of TCONS_00029686 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM2D37.719e-4844.16TM2 domain-containing protein 3 OS=Homo sapiens GN... [more]
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