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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029557 ID=TCONS_00029557|Name=TCONS_00029557|organism=Clytia hemisphaerica|type=transcript|length=1381bp
ttcgaaggggccgtttattcaaagtaatacggtataacaatcaaaattta
ttcttcaaaactttttgaaaatcttgtttgcactggaaaatgacgtcatc
atataTATAATGAACTAAAAATGGTCGAAAACTTTTCGAATCGAATGCGG
TTGTTTTTTGGTGGTTCTTGAACCCAAAAGGAacctctgtgccaaatttc
agccacatATGATTTATTTAAAAGGTTAGGGGCTTTTGTGAGCTAATTCT
CCCTAACTCGGTTACGGTTACAGTATTTATCGGGGAAACTTCGGGTATGT
ATGTGTTCTGTGAAATAAACACATAAGACGTATAAGCTGGAAACAACTTG
AATATTAATTTCTTGCAAGCCTTTTATAGAACCCATCTTTAATTAATTCT
GAGGTGccttaaaaaataaattgttgTGCGACAGATTGcacaaagttttc
ttttaattatCAGCAGGTACAAAATCATTGACAACACTTGCGATCTTGGG
AACGATCAACTCCATCAAATCGCGGATGTCTTGACCGGTCAGTCCTCGCC
TCGGCAGATACCGGATCACATCTTTAGAGGAAGAGCTGAAAAAGTTGCTC
TTGGTGCTCCGAACGATGACCATGTCAGCAGCCAATCGGAAGCGGCCGTT
GAATAAGACATGTTTGTAGTCGAATTTCCCGTCCTCACGTTGATTAAAGT
GAATGAAAATGGCGTGAACTTTTCCGTCAGCTTTTTGCGAAATGATGCTG
AAAAGTTGATGAGTGTCTGATTCCACGCCCCAATCCAAGAATTCCTCGAA
CTCTTTTACAATCTGTCTAATTTCTGGCTTCTCACTTTTCGCAGCGAAAG
GTTTCAAATATCTCTTGATGATTCTTTTTAGAATGTCTTTGCGCGGAATG
CCACGAGCGCGACGTGTGTAAGAAGTCATGTCTAAGAACTCGAAGCCGGA
CGTTTTCTCGCGTTTCTGTACGTGACTTGAAGAGGAGGAGTGGATGAGAT
CTTTCAGTTTCTTGGCTGCTTCGACAGCTGCAGCAAGTTTGGGGTTGGTG
AAGTAATCGAGCGGTGAttttacgtcttttgcatcGTCCTCGCCGCAACA
AACACTGATGACCTTCGCCAATAAACATTAAGAAAGTTATGAATATCTAT
CCATCAATCAGAAATATCAAGAAGGACTAAATGAAGATGGAGCAAGGAGA
ATGCTTTTGGAGAGGGGAAGAGTTGGTTCAATAGAAATGTCAACTACACA
ACAATTATCAGAGTTATAACCATGACAAAGGAATTAAGTCAACTTACCAT
CAGCAgtaataaaaatacaaaattcttCATCGTAAGTTGTTTGATGTCCA
AAATGTTCAGAACTTATCTGTTTTGTTTTAT Run BLAST on NCBI transcript from alignment at sc0000754:23837..25784- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029557 ID=TCONS_00029557|Name=TCONS_00029557|organism=Clytia hemisphaerica|type=transcript|length=1948bp|location=Sequence derived from alignment at sc0000754:23837..25784- (Clytia hemisphaerica)
TTCGAAGGGGCCGTTTATTCAAAGTAATACGGTATAACAATCAAAATTTA
TTCTTCAAAACTTTTTGAAAATCTTGTTTGCACTGGAAAATGACGTCATC
ATATATATAATGAACTAAAAATGGTCGAAAACTTTTCGAATCGAATGCGG
TTGTTTTTTGGTGGTTCTTGAACCCAAAAGGAACCTCTGTGCCAAATTTC
AGCCACATATGATTTATTTAAAAGGTTAGGGGCTTTTGTGAGCTAATTCT
CCCTAACTCGGTTACGGTTACAGTATTTATCGGGGAAACTTCGGGTATGT
ATGTGTTCTGTGAAATAAACACATAAGACGTATAAGCTGGAAACAACTTG
AATATTAATTTCTTGCAAGCCTTTTATAGAACCCATCTTTAATTAATTCT
GAGGTGCCTTAAAAAATAAATTGTTGTGCGACAGATTGCACAAAGTTTTC
TTTTAATTATCAGCAGGTACAAAATCATTGACAACACTTGCGATCTTGGG
AACGATCAACTCCATCAAATCGCGGATGTCTTGACCGGTCAGTCCTCGCC
TCGGCAGATACCGGATCACATCTTTAGAGGAAGAGCTGAAAAAGTTGCTC
TTGGTGCTCCGAACGATGACCATGTCAGCAGCCAATCGGAAGCGGCCGTT
GAATAAGACATGTTTGTAGTCGAATTTCCCGTCCTCACGTTGATTAAAGT
GAATGAAAATGGCGTGAACTTTTCCGTCAGCTTTTTGCGAAATGATGCTG
AAAAGTTGATGAGTGTCTGATTCCACGCCCCAATCCAAGAATTCCTCGAA
CTCTTTTACAATCTGTCTAATTTCTGGCTTCTCACTTTTCGCAGCGAAAG
GTTTTAAATATCTCTTGATGATTCTTTTTAGAATGTCTTTGCGCGGAATG
CCACGAGCGCGACGTGTGTAAGAAGTCATGTCTAAGAACTCGAAGCCGGA
CGTTTTCTCGCGTTTCTGTACGTGACTTGAAGAGGAGGAGTGGATGAGAT
CTTTCAGTTTCTTGGCTGCTTCGACAGCTGCAGCAAGTTTGGGGTTGGTG
AAGTAATCGAGCGGTGATTTTACGTCTTTTGCATCGTCCTCGCCGCAACA
AACACTGATGACCTTCGCCAATAAACATTAAGAAAGTTATGAATATCTAT
CCATCAATCAGAAATATCAAGAAGGACTAAATGAAGATGGAGCAAGGAGA
ATGCTTTTGGAGAGGGGAAGAGTTGGTTCAATAGAAATGTCAACTACACA
ACAGTTATCAGAGTTATAACCATGACAAAGGAATTAAGTCAACTTACCAT
CAACAGTAATAAAAATACAAAATTCTTCATCTTTAGTTGTTTGATGTCCA
AAATGTTCAGAACTTATCTGTTTTGCTTTATGATCGATTTTCATCCGCTA
ATTTATNGCAGCGAAAGGTTTCAAATATCTCTTGATGATTCTTTTTAGAA
TGTCTTTGCGCGGAATGCCACGAGCGCGACGTGTGTAAGAAGTCATGTCT
AAGAACTCGAAGCCGGACGTTTTCTCGCGTTTCTGTACGTGACTTGAAGA
GGAGGAGTGGATGAGATCTTTCAGTTTCTTGGCTGCTTCGACAGCTGCAG
CAAGTTTGGGGTTGGTGAAGTAATCGAGCGGTGATTTTACGTCTTTTGCA
TCGTCCTCGCCGCAACAAACACTGATGACCTTCGCCAATAAACATTAAGA
AAGTTATGAATATCTATCCATCAATCAGAAATATCAAGAAGGACTAAATG
AAGATGGAGCAAGGAGAATGCTTTTGGAGAGGGGAAGAGTTGGTTCAATA
GAAATGTCAACTACACAACAATTATCAGAGTTATAACCATGACAAAGGAA
TTAAGTCAACTTACCATCAGCAGTAATAAAAATACAAAATTCTTCATCGT
AAGTTGTTTGATGTCCAAAATGTTCAGAACTTATCTGTTTTGTTTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029557-exon-sc0000754-1575043694:24935..25784 | TCONS_00029557-exon-sc0000754-1575043694:24935..25784 | Clytia hemisphaerica | exon |
| TCONS_00029557-exon-sc0000754-1575043694:23837..24367 | TCONS_00029557-exon-sc0000754-1575043694:23837..24367 | Clytia hemisphaerica | exon |
| TCONS_00029557-exon-sc0000754-1510915933:24935..25784 | TCONS_00029557-exon-sc0000754-1510915933:24935..25784 | Clytia hemisphaerica | exon |
| TCONS_00029557-exon-sc0000754-1510915933:23837..24367 | TCONS_00029557-exon-sc0000754-1510915933:23837..24367 | Clytia hemisphaerica | exon |
| TCONS_00029557-exon-sc0000754-1491911889:24935..25784 | TCONS_00029557-exon-sc0000754-1491911889:24935..25784 | Clytia hemisphaerica | exon |
| TCONS_00029557-exon-sc0000754-1491911889:23837..24367 | TCONS_00029557-exon-sc0000754-1491911889:23837..24367 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000754 | supercontig | sc0000754:23837..25784 - |
Blast
The following BLAST results are available for this feature:
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