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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029552 ID=TCONS_00029552|Name=TCONS_00029552|organism=Clytia hemisphaerica|type=transcript|length=1808bp
ctaaagtctattcacgataagtgtgcactcttttttcttttacctataac
ttttgaagggattcttcaatctttataaaNGTTCGCCTAAAAGCATTCAT
CACATTTACGAGTTGGTAGAGTTACGTAAAATCACAGGGCGTGTTTATGA
CAAGATGTTACAGATCGCTCCATTACGGGGAGTGCCTGTTGATTTTTTAG
CTCAAAATACGATCAAAATTATCTATCTGATGGGTCAGCGGAAACCTTAC
CCTGGCTCAATAAACACATACAAATCCTTTGTCAAAGACCGAAAAGCGAT
GAATGAATATCGTGAACAGCTGAAACATCTGGAAGATGTTGAGACTGTTT
CTATTTCGACGGAAATTTGTCGGAAAGTTCCACNcgatcttaggagatca
tcactgtgaagaaatttcattaaaatatttattcaatataaagttatgat
acaaagttaataagtgattgaacccaacagcaaaaaactgcagaaaacag
cgtttttagacgtcaatcagcttataactttgtttgatatcttttgactg
aatgttATCATTCCNTTCACAGATATTTGAGAAAGCATATGAGCAATTCG
TGGGTCGCGTTGAAGCTCATCTTCCATATTGTTATGAAGTAACGTTCCAA
GTGAATTACAAAACCATCATGAGGTATGTTGAAGGGAAcaaccattttca
aaattatcagGATGAGTATTGGCACTCCTCAAGGTTATCTCGTCTCGCTG
AACATTTTTACGAGTCGATTGTTGTTAAACCATCAAAAGCAAACTCAGAT
CTCGATCAAAACAAACTAAAGCAGATGATTCTGATAGTGGAGTTCCTCAC
TGAAGGATATTATCGAGATTCCACATTACAAAATGGACCGAAATATTTTG
GCATGTATCACAGAAACTTTGAAGGATGGAAAGGGAGAATAGTCAATAGT
GCTTGCCCTCTCACGCCAGCTTACGATTTGTTGGCCATGGTTGCCATGGT
GAAGGAGATCAATGAAGAAGACCTCAGATCTTCCGATCCCGCTCAACTCT
CCAAAATGGTTGAACACGAGTTTCGGTGAGTCATCTTTTTTGATACATGT
AGCGTTGCGTAATCACTGACGAACGACTTCTCTGGCATCCAATGCGGTTG
CAATTGCCCTGCTCGAGAGCTTTGGTGTGGGCGCCCGTAAATCCACTGCT
ATATGAATAACAAATAAAGATAAACAAAGGACTGCACTTGAGGATAATGG
GTTGATTCCTGATATTTTACTTCATATATCTTCGTAAAATGAATGTTAAA
TAGAGTAACTCTGTAACTAGAACGCACATGGAGAGAACATTTTTTCGCTT
AGTATTTAAATCCTTTATGGAAAACTTGCTCTGAACACCCTTGATATTAT
ACCAAATATTTATGCTTATATTGGATCAAGGGGTATTATTTACCATGGTt
ggattatctaaaaagctttttagtggaagatgaaaaaaatcggCTAATTC
GAGCGCTCGAGCCTCCTGGTGGCttataaaacaatgaaatagcAAGCTTT
CTTGAAtttaagtctgtctcaaaagcaTGTTGACACATTacctttttaac
aatttctAAGAACCAAATTTATGCCATGTTAAAAAGTTATTCACGACCGT
TAAAAGTGTACGGGGCGTACGGCATTttggaattgcggaaatcgaccctt
ttttcttcggaatttcgaaaatctggcaaaattccttcggtatttcggaa
tgctgaaattgttttggtatcggaaatccatgaatttttgaatttcggta
ttgtaaag Run BLAST on NCBI transcript from alignment at sc0000754:75524..77331+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029552 ID=TCONS_00029552|Name=TCONS_00029552|organism=Clytia hemisphaerica|type=transcript|length=1808bp|location=Sequence derived from alignment at sc0000754:75524..77331+ (Clytia hemisphaerica)
ctaaagtctattcacgataagtgtgcactcttttttcttttacctataac
ttttgaagggattcttcaatctttataaaNGTTCGCCTAAAAGCATTCAT
CACATTTACGAGTTGGTAGAGTTACGTAAAATCACAGGGCGTGTTTATGA
CAAGATGTTACAGATCGCTCCATTACGGGGAGTGCCTGTTGATTTTTTAG
CTCAAAATACGATCAAAATTATCTATCTGATGGGTCAGCGGAAACCTTAC
CCTGGCTCAATAAACACATACAAATCCTTTGTCAAAGACCGAAAAGCGAT
GAATGAATATCGTGAACAGCTGAAACATCTGGAAGATGTTGAGACTGTTT
CTATTTCGACGGAAATTTGTCGGAAAGTTCCACNcgatcttaggagatca
tcactgtgaagaaatttcattaaaatatttattcaatataaagttatgat
acaaagttaataagtgattgaacccaacagcaaaaaactgcagaaaacag
cgtttttagacgtcaatcagcttataactttgtttgatatcttttgactg
aatgttATCATTCCNTTCACAGATATTTGAGAAAGCATATGAGCAATTCG
TGGGTCGCGTTGAAGCTCATCTTCCATATTGTTATGAAGTAACGTTCCAA
GTGAATTACAAAACCATCATGAGGTATGTTGAAGGGAAcaaccattttca
aaattatcagGATGAGTATTGGCACTCCTCAAGGTTATCTCGTCTCGCTG
AACATTTTTACGAGTCGATTGTTGTTAAACCATCAAAAGCAAACTCAGAT
CTCGATCAAAACAAACTAAAGCAGATGATTCTGATAGTGGAGTTCCTCAC
TGAAGGATATTATCGAGATTCCACATTACAAAATGGACCGAAATATTTTG
GCATGTATCACAGAAACTTTGAAGGATGGAAAGGGAGAATAGTCAATAGT
GCTTGCCCTCTCACGCCAGCTTACGATTTGTTGGCCATGGTTGCCATGGT
GAAGGAGATCAATGAAGAAGACCTCAGATCTTCCGATCCCGCTCAACTCT
CCAAAATGGTTGAACACGAGTTTCGGTGAGTCATCTTTTTTGATACATGT
AGCGTTGCGTAATCACTGACGAACGACTTCTCTGGCATCCAATGCGGTTG
CAATTGCCCTGCTCGAGAGCTTTGGTGTGGGCGCCCGTAAATCCACTGCT
ATATGAATAACAAATAAAGATAAACAAAGGACTGCACTTGAGGATAATGG
GTTGATTCCTGATATTTTACTTCATATATCTTCGTAAAATGAATGTTAAA
TAGAGTAACTCTGTAACTAGAACGCACATGGAGAGAACATTTTTTCGCTT
AGTATTTAAATCCTTTATGGAAAACTTGCTCTGAACACCCTTGATATTAT
ACCAAATATTTATGCTTATATTGGATCAAGGGGTATTATTTACCATGGTt
ggattatctaaaaagctttttagtggaagatgaaaaaaatcggCTAATTC
GAGCGCTCGAGCCTCCTGGTGGCttataaaacaatgaaatagcAAGCTTT
CTTGAAtttaagtctgtctcaaaagcaTGTTGACACATTacctttttaac
aatttctAAGAACCAAATTTATGCCATGTTAAAAAGTTATTCACGACCGT
TAAAAGTGTACGGGGCGTACGGCATTttggaattgcggaaatcgaccctt
ttttcttcggaatttcgaaaatctggcaaaattccttcggtatttcggaa
tgctgaaattgttttggtatcggaaatccatgaatttttgaatttcggta
ttgtaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029552-exon-sc0000754-1491911889:75524..77331 | TCONS_00029552-exon-sc0000754-1491911889:75524..77331 | Clytia hemisphaerica | exon |
| TCONS_00029552-exon-sc0000754-1510915933:75524..77331 | TCONS_00029552-exon-sc0000754-1510915933:75524..77331 | Clytia hemisphaerica | exon |
| TCONS_00029552-exon-sc0000754-1575043694:75524..77331 | TCONS_00029552-exon-sc0000754-1575043694:75524..77331 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000754 | supercontig | sc0000754:75524..77331 + |
Blast
The following BLAST results are available for this feature:
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