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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029484 ID=TCONS_00029484|Name=TCONS_00029484|organism=Clytia hemisphaerica|type=transcript|length=775bp
TTGCAGAAGATagtaaaatataacaaaataagCTTAATACCAACAGagta
aaatgttaaaaactaaTATCAAAGTGTTGACAAGACTTCAAATAAACTAA
ATCAAAAAATCGATATTGGTCAACCATAAATCTAAACACTAACTAACCAT
TTCTTACAAAAGTCCTTCGAAGGCCTCTTCAAGGCCTGTAATGGTGACTG
GAACAGGCAGAGTTTTGTCTAAATGTCCGCATTTAGaacattttatttca
aattttgccctGCACCGTGTGCATTGGACCAAATTTCCAATGCAATTCGC
ACACCCAATGTTATGTGCACATGAATTGCAGTATACCAATTTCAAGTTAA
ACTCCATACATACGCCACACTTGAAGCAGTCAAGGATTTGATCCTTTTGA
CTTAGTTGAAATCCTGGAGGTGGTGTTGGAATAGTTACAACATCAGCTGA
TCCAGTTGGATGAAACTCTGTGGGTGGTTGATTTGGCGTTACTTCGTTGG
AAGTTGATGTGAcaatatttgaagattttgttgaTAAACCTTCAAATATT
GGAAGGTCGAAATTGAAATCATCTTCATTGTCCAGATCGAGGAAGCCGCA
ATTATAGTTTCTTTTCGTGGCATCGTATGATTCGGGGCGCCATTCTTCAT
AATGTTGACATGGAATGGCACGTACAATTGATTTGTTTTGCCAACTTGAG
GAACCTATTAATAAAATCATAGTAACCTCAACAAGAGTGAAATTataaat
caaaagatttctcACCAGCAGCTAG Run BLAST on NCBI protein sequence of TCONS_00029484-protein >TCONS_00029484-protein ID=TCONS_00029484-protein|Name=TCONS_00029484-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MILLIGSSSWQNKSIVRAIPCQHYEEWRPESYDATKRNYNCGFLDLDNED
DFNFDLPIFEGLSTKSSNIVTSTSNEVTPNQPPTEFHPTGSADVVTIPTP
PPGFQLSQKDQILDCFKCGVCMEFNLKLVYCNSCAHNIGCANCIGNLVQC
TRCRAKFEIKCSKCGHLDKTLPVPVTITGLEEAFEGLL Run BLAST on NCBI transcript from alignment at sc0000749:29635..30409 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029484 ID=TCONS_00029484|Name=TCONS_00029484|organism=Clytia hemisphaerica|type=transcript|length=775bp|location=Sequence derived from alignment at sc0000749:29635..30409 (Clytia hemisphaerica)
CTAGCTGCTGGTgagaaatcttttgatttatAATTTCACTCTTGTTGAGG
TTACTATGATTTTATTAATAGGTTCCTCAAGTTGGCAAAACAAATCAATT
GTACGTGCCATTCCATGTCAACATTATGAAGAATGGCGCCCCGAATCATA
CGATGCCACGAAAAGAAACTATAATTGCGGCTTCCTCGATCTGGACAATG
AAGATGATTTCAATTTCGACCTTCCAATATTTGAAGGTTTAtcaacaaaa
tcttcaaatattgTCACATCAACTTCCAACGAAGTAACGCCAAATCAACC
ACCCACAGAGTTTCATCCAACTGGATCAGCTGATGTTGTAACTATTCCAA
CACCACCTCCAGGATTTCAACTAAGTCAAAAGGATCAAATCCTTGACTGC
TTCAAGTGTGGCGTATGTATGGAGTTTAACTTGAAATTGGTATACTGCAA
TTCATGTGCACATAACATTGGGTGTGCGAATTGCATTGGAAATTTGGTCC
AATGCACACGGTGCagggcaaaatttgaaataaaatgttCTAAATGCGGA
CATTTAGACAAAACTCTGCCTGTTCCAGTCACCATTACAGGCCTTGAAGA
GGCCTTCGAAGGACTTTTGTAAGAAATGGTTAGTTAGTGTTTAGATTTAT
GGTTGACCAATATCGATTTTTTGATTTAGTTTATTTGAAGTCTTGTCAAC
ACTTTGATAttagtttttaacattttactCTGTTGGTATTAAGcttattt
tgttatattttactATCTTCTGCAA Coding sequence (CDS) from alignment at sc0000749:29635..30409 >TCONS_00029484 ID=TCONS_00029484|Name=TCONS_00029484|organism=Clytia hemisphaerica|type=CDS|length=567bp|location=Sequence derived from alignment at sc0000749:29635..30409 (Clytia hemisphaerica)
ATGATTTTATTAATAGGTTCCTCAAGTTGGCAAAACAAATCAATTGTACG
TGCCATTCCATGTCAACATTATGAAGAATGGCGCCCCGAATCATACGATG
CCACGAAAAGAAACTATAATTGCGGCTTCCTCGATCTGGACAATGAAGAT
GATTTCAATTTCGACCTTCCAATATTTGAAGGTTTAtcaacaaaatcttc
aaatattgTCACATCAACTTCCAACGAAGTAACGCCAAATCAACCACCCA
CAGAGTTTCATCCAACTGGATCAGCTGATGTTGTAACTATTCCAACACCA
CCTCCAGGATTTCAACTAAGTCAAAAGGATCAAATCCTTGACTGCTTCAA
GTGTGGCGTATGTATGGAGTTTAACTTGAAATTGGTATACTGCAATTCAT
GTGCACATAACATTGGGTGTGCGAATTGCATTGGAAATTTGGTCCAATGC
ACACGGTGCagggcaaaatttgaaataaaatgttCTAAATGCGGACATTT
AGACAAAACTCTGCCTGTTCCAGTCACCATTACAGGCCTTGAAGAGGCCT
TCGAAGGACTTTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029484-exon-sc0000749-1491911889:29635..30409 | TCONS_00029484-exon-sc0000749-1491911889:29635..30409 | Clytia hemisphaerica | exon |
| TCONS_00029484-exon-sc0000749-1510915933:29635..30409 | TCONS_00029484-exon-sc0000749-1510915933:29635..30409 | Clytia hemisphaerica | exon |
| TCONS_00029484-exon-sc0000749-1575043694:29635..30409 | TCONS_00029484-exon-sc0000749-1575043694:29635..30409 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000749 | supercontig | sc0000749:29635..30409 . |
Blast
The following BLAST results are available for this feature:
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