|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029481 ID=TCONS_00029481|Name=TCONS_00029481|organism=Clytia hemisphaerica|type=transcript|length=1216bp
acgagaaatattttagcgatgaacggataataaaccatttatttggacgc
agtctcatccaataaaaaaaatattggacgtgcgagaaaagatattggac
aaggcttcgactttgtccaataactgtttaatattttcattatctACCAA
ATCccttatatttttataatctaTCATATAATATTATGTCATTATGACCT
AATAACAAAAAACCTactttttaaaatacttttagcctctccactgttct
taaattgttcttattttttggcatttttgagcctcatNAATActttcagc
ctctccactgttcttaaattgttcttattttttggcatttttgagcctca
ttgttcttataaaattgttcttataaaaaaaagtgtatgttgcTCTAAGA
CCAAGTTGCTTATTTTTTTACCATTCACAGGGCTGGACccttagcaactc
ggttgcttataaaaaatgtgtaacatATCAAAGGGGATGCGTTCAGCCTT
TATAGCCCAGTACGCTCTAAAGATGTGGACGAAAATATCCAATCTCATGA
ATATGTCGTGAACTGTTAAGAACCTTTATTTTATGTATAATTAGCCCGAA
TGAAAAGTGTGTCACCGTTAGgtcaatttgaataaaattcccTCGAAACA
AATCTCTAGATTCTTTCCCGAAAAGGGAAATCCAGGGAGCGATTTTCCTA
TTTAGGAGTTTTTGCGACCCTGCGTGGGTGGAACTCGTGGAGGTGAAAGC
GACACATTCCCGTACCCCTATTACAGATATGATTGTTTTGAGCCCTCAAT
TTCAGGTTCGCTTTGAAGTCTAAGTACAGATGAATTGAAGTTGATAATTT
AATTTTGCTTTATgagttttataaaaatcaaactttgctTTCAAAAGCAA
AACTGAATGAATTCGAGGGGTGAAGTTGATTGACAGCCAGAACGGTTGAT
TGAAAGCCGGGACGATTGATTGACAGGTAAAGATAGAAGAATTCCTTACT
TTTTATGTAGTGGACAGGGTTTGATTTaacttttcaaaagtgatttgtga
aaaattccttaaaaaacaaacttcaagtAAAATAGAACTTAATTTTGTAG
CTTTGGAGATCGTTTTTCTTAGACCATCATCGTATATATTTTTTAGTCAT
TTTTCAAAGAATAAAACTTGTGTGTAGTTATTAAAGAAGACGCAATTTCA
TTCACTTTCTTCAAAT Run BLAST on NCBI transcript from alignment at sc0000749:17079..18294 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029481 ID=TCONS_00029481|Name=TCONS_00029481|organism=Clytia hemisphaerica|type=transcript|length=1216bp|location=Sequence derived from alignment at sc0000749:17079..18294 (Clytia hemisphaerica)
ATTTGAAGAAAGTGAATGAAATTGCGTCTTCTTTAATAACTACACACAAG
TTTTATTCTTTGAAAAATGACTAAAAAATATATACGATGATGGTCTAAGA
AAAACGATCTCCAAAGCTACAAAATTAAGTTCTATTTTacttgaagtttg
ttttttaaggaatttttcacaaatcacttttgaaaagttAAATCAAACCC
TGTCCACTACATAAAAAGTAAGGAATTCTTCTATCTTTACCTGTCAATCA
ATCGTCCCGGCTTTCAATCAACCGTTCTGGCTGTCAATCAACTTCACCCC
TCGAATTCATTCAGTTTTGCTTTTGAAagcaaagtttgatttttataaaa
ctcATAAAGCAAAATTAAATTATCAACTTCAATTCATCTGTACTTAGACT
TCAAAGCGAACCTGAAATTGAGGGCTCAAAACAATCATATCTGTAATAGG
GGTACGGGAATGTGTCGCTTTCACCTCCACGAGTTCCACCCACGCAGGGT
CGCAAAAACTCCTAAATAGGAAAATCGCTCCCTGGATTTCCCTTTTCGGG
AAAGAATCTAGAGATTTGTTTCGAgggaattttattcaaattgacCTAAC
GGTGACACACTTTTCATTCGGGCTAATTATACATAAAATAAAGGTTCTTA
ACAGTTCACGACATATTCATGAGATTGGATATTTTCGTCCACATCTTTAG
AGCGTACTGGGCTATAAAGGCTGAACGCATCCCCTTTGATatgttacaca
ttttttataagcaaccgagttgctaaggGTCCAGCCCTGTGAATGGTAAA
AAAATAAGCAACTTGGTCTTAGAgcaacatacacttttttttataagaac
aattttataagaacaatgaggctcaaaaatgccaaaaaataagaacaatt
taagaacagtggagaggctgaaagTATTNatgaggctcaaaaatgccaaa
aaataagaacaatttaagaacagtggagaggctaaaagtattttaaaaag
tAGGTTTTTTGTTATTAGGTCATAATGACATAATATTATATGAtagatta
taaaaatataaggGATTTGGTagataatgaaaatattaaacagttattgg
acaaagtcgaagccttgtccaatatcttttctcgcacgtccaatattttt
tttattggatgagactgcgtccaaataaatggtttattatccgttcatcg
ctaaaatatttctcgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029481-exon-sc0000749-1491911889:17079..18294 | TCONS_00029481-exon-sc0000749-1491911889:17079..18294 | Clytia hemisphaerica | exon |
| TCONS_00029481-exon-sc0000749-1510915933:17079..18294 | TCONS_00029481-exon-sc0000749-1510915933:17079..18294 | Clytia hemisphaerica | exon |
| TCONS_00029481-exon-sc0000749-1575043694:17079..18294 | TCONS_00029481-exon-sc0000749-1575043694:17079..18294 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000749 | supercontig | sc0000749:17079..18294 . |
Blast
The following BLAST results are available for this feature:
|
