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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029451 ID=TCONS_00029451|Name=TCONS_00029451|organism=Clytia hemisphaerica|type=transcript|length=3555bp
CGAATTAATGAAATGGCGTCATCAAATGATATGAGAGAAATCAAAACAAG
TTTAACAGACATGCAGAAAACATTTAACGAGATCAaaatgaaatcgaaaa
attctaCAAACGTTGAAAGTAAACTGACCGAAGATCTACAAACGGTGTAT
AGGAAAAATGATGAATTGTTAAATCGTATAACAGGTTTAGAGAATCAGCT
TTATcatgagaaagaaaatgttctgACTCTTCAAAAAGTGGTTAAAGAGA
AAGAAACAGAGATCAATGATCTGGATACACAAATGGAAGAACATAAAAGC
CAAGCCGAAATTAATGCTTCGCAAAGTGAACTTCACAATAACATGAATGA
AAGTAAATACGAATCACAAatcgaaaatttaaaacttgaaaatgagattt
tacaATCCCGCGTAATGATATTAGAAGGAATTAGTCATGAAATGGACATT
TTAACGACCGAAcgtaataatttgaaaaaagagaACACACAAATGAGACA
GCGTCAGTCGAGAACGGATAAAAGTGAAATGGTATTGGTCGCTAATATGG
CAAACGATCCAGAATCAAAAGAGAAAGTGATAACAGAAATGTGCAAAGTC
AGCAAACTTGACGAAAACGCGAAGGAAAAACTACAAGAGATGCTATCGAT
GCCTGGTTTTGAGCGTTTCTTATCCGAAGATATGAGTCCTATAAATCTGA
TGAGTGATGCTTCATCATGTGCTACTTCAAAGAGTTCCAACTCTGTCAAA
AGTTTGAGTCGTGAAAGTGTTTTTGAGAAAGAACACACCATCAACCATAT
GTACCAAGCATCTTCAGACACCCTCATGGCGCCCGAGGGATCTGCATCTT
TTGAAGACGTCATTCAAGTCTACCACCCACCGCCCACTGATGATGTTGAC
GCAACGGTCGATTACAACGGTGGAACAAGCCTGGGTCCTGATAGCTCTAT
CCACCAATCACAGCCAAGCCCTGGATATGTTAGCCAATCACAATCGAATG
CTGGTCAAACACCTTATCGTCAAAACAATGTGAAACCATCTGCACTTCCT
CCACAGTTACAACGTCAACTGGAAAAAGCTTTCGATAAGTCACCCTCCAA
CGTTTCGTTAGATTCCAACATGAGTGCCAAGCTGGATCGTATTTTCTGTG
AATCAAAAGCTTTGAGCGGTGATATTGCAAGAGGAACGTCACACGAAAAT
GTCAATTATAAACAAGTGTTGAGTGAATTCAATAAAATGATCTCAAAGAT
GAGCGGTGCTTCCATCAATGAATCAACAGAAGACGCCGCTTATTCACCAG
TTCCCACCCCTACACCTTCCAGTCGAAAACGTGTCACATTTTCTGATCAC
GTGGTagatttcaaccaatcagaaaacgATACTTGGTCTATGTCATCAAC
GATGAGCTGTCAATCAAAATCCACAAATGATGATAAGAATCAACGAGATA
AGGAGTTCTTCGAAGccttgaaaaagaattttccttcCCTTTCAAGACAT
GAATCTTCCAGTGCTGGTGCTATCCCACCTAAACCAGAGTCTCGTAGACC
CGACCAGCAATCTCCATCTGTCATCCCGTCTCCGACTAAAGCGCCACATT
CACCGAGAGGTCAAACAAGTTTGACAGGACAAGCTCTCAACCTTATGAAA
GCTGAGAAAAGCTTCATCAAAACAGAGACGAGCAATACAATGGCTTCATT
CGATAATTTCGTTCAACTACTATCTAAATTTGAAACCCAACCTGGTATAA
CATCTTCCTCGCCGATGATACAATCGAAACTGGTGGAATCTAACCAGTCC
ACTGATCAGGCACTATCTGCAATGCTGTCAGCATATCATGAAGAAGTTGG
TGAAAGACAGTTGAACCTCTCCTCGCCTGGTGACGGCGCTTCGAATCTAG
CATCACCTTTATTAAACGGATCTTTGAACAGCTCTGGAGGTATGAGTCAA
GACAGTAAACTTCCAGTCACTCCaaaaaactttctgaaaaattatCAACC
CCTTGAGAACGTTGAATATAATCCTCAATTGGCTGGATTAGCGAACCAAC
TTTTTCAGGATGATAGTTATAATGGTTTACCAGTTCAAGATGTAAATCAT
ACTCGACTGCTTGAAAATACTTCGTTTGATGGCCTACGCGAAGGAGTTGT
TTACGAGCCTAAACTTCGACCACAGTTGAACAATCCGCGTCTTTATAGTC
GTTCATCAACACCAAGTGGTCAATCAAACTCGCCATCGTCTAACCAACCT
CCTAATTTCTCGACATCTTTATTGCACCAATAAACTGTTGCTTTTGCTGA
TGCACGAATAATTTGGGAATAGAttgtcttttgaaaatcaggttGGGAGT
TTCGCTTTGGTACTCCTTTCAGCTGCAAACGAGACGGTTTTTTTGGctac
aatttgaaaaaagaggTTCTAGGGATTGGGTTTGAGTCAAATGACGTCAA
acccttttagaaatttgacgTCATTCGTTCTGggtaaacaaaaaattcat
gaGCTTTTAATGAAGAAAGTGACAAtaagttttttcttctttttttctgt
agaaattttttgacattAAGACCCACACAAAATCGAAGTTGCTTCACGCT
TGGTAAGGCTGTAAATTTAGAACGTCATGATTGATATTAATGTTTGGTAG
GAAAACCTCTACCTTATTTACAGCTCTCCTAATTGTCAGTTGTGCACTAT
TGCCCGATCGAGAGACGCCTTGATCCAGGGACGATTTACCTGTCGTCTTG
CTGTGAAAGAGGCAAAGATAAGTTTGGCTTACGAGAGCTTgctgaaattt
taaattaaaatgaatCGATATATTTTCGGTCAATTCTCTCCTACGTTCGA
CAGTTTCTAAATTTGGCATAGATTGcatttcaatcatttttagaattcaa
aaaaGGCTCCTCAATCAACGGCGGACCCACCTTGATTTAGAGGCATTCCT
TGTTCGTGCAATAGTCCGCCACTGATTTTATCTTCTATTATTCGAAAATT
CTGCtgaattcaaattatttttagctCTGTAAGTAATCtcaatttgcaaa
ttttaaagGTTAAATTATTggttttatatttatttatttatagttTTTAT
CGACAGTTTTTGTTaaacactcctgtctcacagccccggtggaactttct
aaaaatttattttgaaatccccatggggatagaaattctattgttccgag
CTTAAAATATCcaatgggatggttttggagtgcaatttttacattggatt
tcgaatggggatTACATCAAAGTCAACTCCCTAGTaaggctgaaattgta
gggtatttttcccaccaggGACGAGAATTTGGTCAAATCTTTCAATGGGG
CTCGGGTCCCAGCCTGTCTGTAACACAGGGGTGTTGTTAATAATatgcat
ttttgaattttttctttcgaaataatattttgagatttttttaaataaat
ttttatgaacAAAATAATGTCAACAGAAAAATCACATGCACATGCCTGTT
TTATTTGTTTCCTTTTATTATAAGGAATTTGATATCTAAATTGGTTAGAC
ATGGC Run BLAST on NCBI transcript from alignment at sc0000748:83233..89957- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029451 ID=TCONS_00029451|Name=TCONS_00029451|organism=Clytia hemisphaerica|type=transcript|length=6725bp|location=Sequence derived from alignment at sc0000748:83233..89957- (Clytia hemisphaerica)
CGAATTAATGAAATGGCGTCATCAAATGATATGAGAGAAATCAAAACAAG
TTTAACAGACATGCAGAAAACATTTAACGAGATCAAAATGAAATCGAAAA
ATTCTACTAACGTTGAAAGTAAACTGACCGAAGATCTACAAACGGTGTAT
AGGAAAAATGATGAATTGCTAAATCGTATAACAGGTTTAGAGAATCAGCT
TTATCATGAGAAAGAAAATGTTCTGACTCTTCAAAAAGTGGTTAAAGAGA
AAGAAACAGAGATCAATGATTTGGATACACAAATGGAAGAACATAAAAGC
CAAGCCGAAATTAATGCTTCGCAAAGTGAACTTCACAATAACATGAATGA
AAGTAAATACGAATCACAAATCGAAAATTTAAAACTTGAAAATGAGATTT
TACAATCCCGCGTAATGATATTAGAAGGAATTAGTCATGAAATGGACATT
TTAACGACCGAACGTAATAATTTGAAAAAAGAGAACACACAAATGAGACA
GCGTCAATCGAGAACGGATAAAAGTGAAATGGTATTGGTCGCTAATATGG
CAAACGATCCAGAATCAAAAGAGAAAGTGATACAAGAAATGTGCAAAGTC
AGCAAACTTGACGAAAACGNTTTTTCCTCGCCTAAAGGCTCGGAAAAATA
TTACGGAAAAATCTCGGAACTCGTAAAATATTTCTCGTATTGCACTCGAA
GTCATGCGATAACTAGTACTTATTATGCATATTGATATCACAAAATTAGT
TTTCATTAAAGTATGTTCATATTTTCTTTTTCAGGGTCCGGAGGTACAGC
ATTTAACATCAGATTTGCAACGTGTTAATCTTGAGCTAGTGGAAGAAAAA
TCAAAAGTGTGCCAGTTAAGGAAAATCGTCCAAGAGCTTGAAGAAGTGAT
AGAAAACGAAAACGACGTTTTGAAAGAACGCGATCAAAAAACAGCTGAGA
TTCAAAAACTACGTGCTAAAATACAACTACACGAAAACAATGAGAAAATA
CGCAAGCAGTTAGCCAAAGAAAAGAAATTACTTCAACGCAAAAGCTCGTC
TATGCAGAAAGAACTAAAAGTCATCAATACTCTTTACCAAACTTCTGCCA
CCGATATTGCTCAAAAGGATAATCATATATTGGAGTTGTTAGCTGAGAGG
AAACGATTGATCGCTTCCAATGAGAAATTTGCCAAAGATTTAACAGCTGT
TAATACTAAATGTATGGAGTGTGAGAAATTGGTGGAAAAGTATAAACGAG
AAAGTGCCTTCTTGGTCGAGAAACTGAATGCTGGTGCTAAAGAGCGTGAA
GAAATGAAACAACGAAATGAATCTTTGGAGGCGCGAATTAACGAAATGGC
GTCATCAAATGATATGAGAGAAATCAAAACAAGTTTAACAGATATGCAGA
AAACATTTAACGAGATCAAAATGAAATCGAAAAATTCTACAAACGTTGAA
AGTAAACTGACCGAAGATCTACAAACGGTGTATAGGAAAAATGATGAATT
GTTAAATCGTATAACAGGTTTAGAGAATCAGCTTTATCATGAGAAAGAAA
ATGTTCTGACTCTTCAAAAAGTGGTTAAAGAGAAAGAAACAGAGATCAAT
GATCTGGATACACAAATGGAAGAACATAAAAGCCAAGCCGAAATTAATGC
TTCGCAAAGTGAACTTCACAATAACATGAATGAAAGTAAATACGAATCAC
AAATCGAAAATTTAAAACTTGAAAATGAGATTTTACAATCCCGCGTAATG
ATATTAGAAGGAATTAGTCATGAAATGGACATTTTAACGACCGAACGTAA
TAATTTGAAAAAAGAGAACACACAAATGAGACAGCGTCAATCGAGAACGG
ATAAAAGTGAAATGGTATTGGTCGCTAATATGGCAAACGATCCAGAATCA
AAAGAGAAAGTGATACAAGAAATGTGCAAAGTCAGCAAACTTGACGAAAA
CGCGAAGGAAAAACTACAAGAGATGCTATCGATGCCTGGTTTTGAGCGTT
TCTTATCCGAAGATATGAGTCCTATAAATCTGATGAGTGATGCNCTCGGA
AAAATATTACGGAAAAATCTCGGAACTCGTAAAATATTTCTCGTATTGCA
CTCGAAGTCATGCGATAACTAGTACTTATTATGCATATTGATATCACAAA
ATTAGTTTTCATTAAAGTATGTTCATATTTTCTTTTTCAGGGTCCGGAGG
TACAGCATTTAACATCAGATTTGCAACGTGTTAATCTTGAGCTAGTGGAA
GAAAAATCAAAAGTGTGCCAGTTAAGGAAAATCGTCCAAGAGCTTGAAGA
AGTGATAGAAAACGAAAACGACGTTTTGAAAGAACGCGATCAAAAAACAG
CTGAGATTCAAAAACTACGTGCTAAAATACAACTACACGAAAACAATGAG
AAAATACGCAAGCAGTTAGCCAAAGAAAAGAAATTACTTCAACGCAAAAG
CTCGTCTATGCAGAAAGAACTAAAAGTCATCAATACTCTTTACCAAACTT
CTGCCACCGATATTGCTCAAAAGGATAATCATATATTGGAGTTGTTAGCT
GAGAGGAAACGATTGATCGCTTCCAATGAGAAATTTGCCAAAGATTTAAC
AGCTGTTAATACTAAATGTATGGAGTGTGAGAAATTGGTGGAAAAGTATA
AACGAGAAAGTGCCTTCTTGGTCGAGAAACTGAATGCTGGTGCTAAAGAG
CGTGAAGAAATGAAACAACGAAATGAATCTTTGGAGGCGCGAATTAACGA
AATGGCGTCATCAAATGATATGAGAGAAATCAAAACAAGTTTAACAGATA
TGCAGAAAACATTTAACGAGATCAAAATGAAATCGAAAAATTCTACAAAC
GTTGAAAGTAAACTGACCGAAGATCTACAAACGGTGTATAGGAAAAATGA
TGAATTGTTAAATCGTATAACAGGTTTAGAGAATCAGCTTTATCATGAGA
AAGAAAATGTTCTGACTCTTCAAAAAGTGGTTAAAGAGAAAGAAACAGAG
ATCAATGATCTGGATACACAAATGGAAGAACATAAAAGCCAAGCCGAAAT
TAATGCTTCGCAAAGTGAACTTCACAATAACATGAATGAAAGTAAATACG
AATCACAAATCGAAAATTTAAAACTTGAAAATGAGATTTTACAATCCCGC
GTAATGATATTAGAAGGAATTAGTCATGAAATGGACATTTTAACGACCGA
ACGTAATAATTTGAAAAAAGAGAACACACAAATGAGACAGCGTCAGTCGA
GAACGGATAAAAGTGAAATGGTATTGGTCGCTAATATGGCAAACGATCCA
GAATCAAAAGAGAAAGTGATAACAGAAATGTGCAAAGTCAGCAAACTTGA
CGAAAACGCGAAGGAAAAACTACAAGAGATGCTATCGATGCCTGGTTTTG
AGCGTTTCTTATCCGAAGATATGAGTCCTATAAATCTGATGAGTGATGCT
TCATCATGTGCTACTTCAAAGAGTTCCAACTCTGTCAAAAGTTTGAGTCG
TGAAAGTGTTTTTGAGAAAGAACACACCATCAACCATATGTACCAAGCAT
CTTCAGACACCCTCATGGCGCCCGAGGGATCTGCATCTTTTGAAGACGTC
ATTCAAGTCTACCACCCACCGCCCACTGATGATGTTGACGCAACGGTCGA
TTACAACGGTGGAACAAGCCTGGGTCCTGATAGCTCTATCCACCAATCAC
AGCCAAGCCCTGGATATGTTAGCCAATCACAATCGAATGCTGGTCAAACA
CCTTATCGTCAAAACAATGTGAAACCATCTGCACTTCCTCCACAGTTACA
ACGTCAACTGGAAAAAGCTTTCGATAAGTCACCCTCCAACGTTTCGTTAG
ATTCCAACATGAGTGCCAAGCTGGATCGTATTTTCTGTGAATCAAAAGCT
TTGAGCGGTGATATTGCAAGAGGAACGTCACACGAAAATGTCAATTATAA
ACAAGTGTTGAGTGAATTCAATAAAATGATCTCAAAGATGAGCGGTGCTT
CCATCAATGAATCAACAGAAGACGCCGCTTATTCACCAGTTCCCACCCCT
ACACCTTCCAGTCGAAAACGTGTCACATTTTCTGATCACGTGGTAGATTT
CAACCAATCAGAAAACGATACTTGGTCTATGTCATCAACGATGAGCTGTC
AATCAAAATCCACAAATGATGATAAGAATCAACGAGATAAGGAGTTCTTC
GAAGCCTTGAAAAAGAATTTTCCTTCCCTTTCAAGACATGAATCTTCCAG
TGCTGGTGCTATCCCACCTAAACCAGAGTCTCGTAGACCCGACCAGCAAT
CTCCATCTGTCATCCCGTCTCCGACTAAAGCGCCACATTCACCGAGAGGT
CAAACAAGTTTGACAGGACAAGCTCTCAACCTTATGAAAGCTGAGAAAAG
GTAATATCCAACCTTCAATTGCTAATTTTGAGAATTTGCCTTAATTTTTG
GTTAGTAATCTTTGTTGATGTGCCTTTTTTGGGGAAATTAGATAGGTGTC
TGAATTCAAATTTTTACTGTTTACTTAAAACGTAGGCTGCTGGCATCCAC
TTACGGATTTGTGCTCTTCATAAGTAATGCTTAATAAAAACCGGAGTGGG
TGGTAGATTATTAGGCATTATTATCTAATACTACATTGGGTTTTGTAGAG
GTCTGCGATTCAGGCTAACTTAAAAGGTAATCTTTAAAAAAAAGCGTCCT
TGTTCCCTGACTTTTTGGATAAAGTGTCGTTAAATGTTCTAATGATGGTG
TAAAATCATAGATCGATCGGTTTCATTGCACCATGATTGAGGCCAGATCA
TTCTACTGCTCAATTTTTTTCCAATCTTTAGCTTCATCAAAACAGAGACG
AGCAATACAATGGCTTCATTCGATAATTTCGTTCAACTACTATCTAAATT
TGAAACCCAACCTGGTATAACATCTTCCTCGCCGATGATACAATCGAAAC
TGGTGGAATCTAACCAGTCCACTGATCAGGCACTATCTGCAATGCTGTCA
GCATATCATGAAGAAGTTGGTGAAAGACAGTTGAACCTCTCCTCGCCTGG
TGACGGCGCTTCGAATCTAGCATCACCTTTATTAAACGGATCTTTGAACA
GCTCTGGAGGTATGAGTCAAGACAGTAAACTTCCAGTCACTCCAAAAAAC
TTTCTGAAAAATTATCAACCCCTTGAGAACGTTGAATATAATCCTCAATT
GGCTGGATTAGCGAACCAACTTTTTCAGGATGATAGTTATAATGGTTTAC
CAGTTCAAGATGTAAATCATACTCGACTGCTTGAAAATACTTCGTTTGAT
GGCCTACGCGAAGGAGTTGTTTACGAGCCTAAACTTCGACCACAGTTGAA
CAATCCGCGTCTTTATAGTCGTTCATCAACACCAAGTGGTCAATCAAACT
CGCCATCGTCTAACCAACCTCCTAATTTCTCGACATCTTTATTGCACCAA
TAAACTGTTGCTTTTGCTGATGCACGAATAATTTGGGAATAGATTGTCTT
TTGAAAATCAGGTTGGGAGTTTCGCTTTGGTACTCCTTTCAGCTGCAAAC
GAGACGGTTTTTTTGGCTACAATTTGAAAAAAGAGGTTCTAGGGATTGGG
TTTGAGTCAAATGACGTCAAACCCTTTTAGAAATTTGACGTCATTCGTTC
TGGGTAAACAAAAAATTCATGAGCTTTTAATGAAGAAAGTGACAATAAGT
TTTTTCTTCTTTTTTTCTGTAGAAATTTTTTGACATTAAGACCCACACAA
AATCGAAGTTGCTTCACGCTTGGTAAGGCTGTAAATTTAGAACGTCATGA
TTGATATTAATGTTTGGTAGGAAAACCTCTACCTTATTTACAGCTCTCCT
AATTGTCAGTTGTGCACTATTGCCCGATCGAGAGACGCCTTGATCCAGGG
ACGATTTACCTGTCGTCTTGCTGTGAAAGAGGCAAAGATAAGTTTGGCTT
ACGAGAGCTTGCTGAAATTTTAAATTAAAATGAATCGATATATTTTCGGT
CAATTCTCTCCTACGTTCGACAGTTTCTAAATTTGGCATAGATTGCATTT
CAATCATTTTTAGAATTCAAAAAAGGCTCCTCAATCAACGGCGGACCCAC
CTTGATTTAGAGGCATTCCTTGTTCGTGCAATAGTCCGCCACTGATTTTA
TCTTCTATTATTCGAAAATTCTGCTGAATTCAAATTATTTTTAGCTCTGT
AAGTAATCTCAATTTGCAAATTTTAAAGGTTAAATTATTGGTTTTATATT
TATTTATTTATAGTTTTTATCGACAGTTTTTGTTAAACACTCCTGTCTCA
CAGCCCCGGTGGAACTTTCTAAAAATTTATTTTGAAATCCCCATGGGGAT
AGAAATTCTATTGTTCCGAGCTTAAAATATCCAATGGGATGGTTTTGGAG
TGCAATTTTTACATTGGATTTCGAATGGGGATTACATCAAAGTCAACTCC
CTAGTAAGGCTGAAATTGTAGGGTATTTTTCCCACCAGGGACGAGAATTT
GGTCAAATCTTTCAATGGGGCTCGGGTCCCAGCCTGTCTGTAACACAGGG
GTGTTGTTAATAATATGCATTTTTGAATTTTTTCTTTCGAAATAATATTT
TGAGATTTTTTTAAATAAATTTTTATGAACAAAATAATGTCAACAGAAAA
ATCACATGCACATGCCTGTTTTATTTGTTTCCTTTTATTATAAGGAATTT
GATATCTAAATTGGTTAGACATGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029451-exon-sc0000748-1575043694:89887..89957 | TCONS_00029451-exon-sc0000748-1575043694:89887..89957 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1575043694:85558..87147 | TCONS_00029451-exon-sc0000748-1575043694:85558..87147 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1575043694:83233..85126 | TCONS_00029451-exon-sc0000748-1575043694:83233..85126 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1510915933:89887..89957 | TCONS_00029451-exon-sc0000748-1510915933:89887..89957 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1510915933:85558..87147 | TCONS_00029451-exon-sc0000748-1510915933:85558..87147 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1510915933:83233..85126 | TCONS_00029451-exon-sc0000748-1510915933:83233..85126 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1491911889:89887..89957 | TCONS_00029451-exon-sc0000748-1491911889:89887..89957 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1491911889:85558..87147 | TCONS_00029451-exon-sc0000748-1491911889:85558..87147 | Clytia hemisphaerica | exon |
| TCONS_00029451-exon-sc0000748-1491911889:83233..85126 | TCONS_00029451-exon-sc0000748-1491911889:83233..85126 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000748 | supercontig | sc0000748:83233..89957 - |
Blast
The following BLAST results are available for this feature:
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