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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029413 ID=TCONS_00029413|Name=TCONS_00029413|organism=Clytia hemisphaerica|type=transcript|length=2695bp
cacggccaattttcgttctgtttacttgatatttttcgtgcaaatttaca
tgggatcaaagctaaagctaagcaaaaatttaattcgaaacccgtgtatt
gatGATGATCAATTTTCctggaagataatttttttatcaccTTTTTATTT
GTTGCGATTGAACTTGCTTTTAATTAACGTGATACTTCTTTGTAATCTGG
TTTTGAGATTAAACGTTTTgaactttttaacatttttaacatttttttta
ttctaataTATTGTGCTGCCAAAAGGGACTCTATCTACcaatttgacttt
tgaatttgGCTGACTTTTTAGTACAGTAGAACCTCCAAAAGGGGATTGGA
CACCTGTTTAGCGGACACCAAGATGTCTctccgatggtgtccgctaatta
gaggttccattGTATAAAGAAATACTCATTTCATTGCAGgtaaacttttt
tgactgaGCCGATTTAAGAGATTTATAGATTGTATCAAAAGTTCCATTTC
CACGTCATAGTCATAAACCCTTTATACAAGACAGTCAGAGTCATTTTCTG
ATCGCTTGTTCGTGTGGAAAACACAGTTGACTTAAATTAGAGAGCCCTTG
TACATTTTCTTTTGCCTATTGAGATTTTGTTATTATATTCATAGTTTAtt
gttattgattttattcACTTTACACCTTAGTCATTTTCTAATGGCTTGTC
AGTGAGGTCAGGCTTTTGGTATACTCATGGGGGAGACATTTTTAGTAGGT
TTTTTCCTTTAGACTTTAGGATAACTGTTAAGTACTTGGTATCATTTTCA
AGAAAACCTCTCTTCCTGGATTGCAAAGTTTGCTGATgatcaaaattgaa
tatcttctCAACGACAATGCATGGTGTCGGGGGGACAAACGAATTTTTTA
TCCCATATTTTGTGGGGAgttggaaatttgagaaaatgggAGAATATGTA
AAAGATTCTGTAGGGGCAGCATTTTCAGATTTGCGTTAATCAAGGTTGCC
TAGAAACGTTTCAACCAAagatttttcatcatttccaTAATAGCTCTTCA
GGGtctaaattttaccaaaaattcttCTCGATCTGTAGTCCTAAATTATT
GGCCGGACCACTCATTGGTTTACTGGGTCTTAAGGGATGAGTTAAAATTT
TAACTTAGGGGGGACTTGGACTTATCAGGCATGGCTCTACCCCAAAGGGG
GGAAGCTCATATGGGGGGACAAGAAATTCTTAGGGGGTAGTTGAGACCCT
GAGGACNGAAGCTCATGTGGGGGAACAAGAAATTCTTAGGGGGAGTTGAG
ACCCTGAGGATACCATgcaatgattttgaaaatttgatatcaaaataagg
agcattttgaaagaaaattatgaTGACATCGTACTTTAAAATTAAGAGTC
GTTTTCAAAAGAATAAATTGACTCCCTGCACAACCTGACGACTATAAATT
CATGCAGAtcttattgaaaaaagattttcattccTCAAGAAAGCTAAATA
AACCCTGTAGTTTATTCATTTTGTTAGTATTCTTTAAAGATATGgtggtg
attttatttttatttctattttttcgtTTATAGAGTCTATAGTTTTATAA
GAGATTTATTGTTTGTATTTATTTGACTTATAAGAGATTTGGTGGttatt
ttatacattttttttcGTTTATAAAGTTTTATAAGAAGTGAAGCGCAAAA
TATTGGAGGCCTCAGACATGATcatttatatatcaaaagaagcgtattgg
gATGTAGAATCCTGAAATCGCTGTTATTAAAATTATCTCTTGCCCTATTG
TGAGTAAATTGGAGTGaatgtttctgaaaaaaattaagtGCTGACTTCAT
CATTTTTCGTCCAAAATCAANaatgtttctgaaaaaaattaagtGCTGAT
GTTATCATTTTTCGTCcaaaatcagcatttttcaaGTCTAATGCCATCAG
TTTTTAGCGCGAAACTTATGGTATTTTGGGACATGTCATAAGGAGGCCTG
gaaatcccgagttatttttttcgatCTATATTTTagagttacgaaaaaac
cgaGCTATGACGTCATTCTTCGTAAATTGTGTAGgaataactcgaaaaaa
ttaAGATCCGAGTTGTGAAATAGGAATAACTCCAAAAGTTAAAGGAAAAA
ATAACTCTAACATTTAAAAGAACCGAGTTAACTACAAAAAAACAACTCGA
AAAACTAGGGAAAGCAaatttttttgagtcaaaattctaagaacaacttg
aaaaattaaaggaagcaaaaaaataatcGTACCAAATTGATGATGACGTC
AAAATCAAgacaaaatttatgaaaaatgacGCTATAACTCAGGTTTTTCt
taaatcgaaaaaattaacTCTGGATTTCCGGGCCTCGTGCTATAAGTTAC
AGTTACAGAAAATTCGCAAGTTACTCCTTGATTTGCGAAATCAAATTACC
GCTATTTATCCCAGAAGGCAGTTTTCAATTGTTACTTGTATTTATTACGT
TGAAACATTAAAGTTTTTAACTtgcttttttcaagtttttttgccCCGAG
AAAATGAAATGTTTCGTTATATTCTGTTAAAATACGCAAAATTTTGCGAC
AATTTATGACATAGTATCTTAGTATCTATTTTTTTCCTGGTGTAGCTTAT
TCATTTTGTCAGCACAACTGTCTTTTTTAAAGTAAAGactttgta Run BLAST on NCBI transcript from alignment at sc0000747:41004..43698 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029413 ID=TCONS_00029413|Name=TCONS_00029413|organism=Clytia hemisphaerica|type=transcript|length=2695bp|location=Sequence derived from alignment at sc0000747:41004..43698 (Clytia hemisphaerica)
tacaaagtCTTTACTTTAAAAAAGACAGTTGTGCTGACAAAATGAATAAG
CTACACCAGGAAAAAAATAGATACTAAGATACTATGTCATAAATTGTCGC
AAAATTTTGCGTATTTTAACAGAATATAACGAAACATTTCATTTTCTCGG
ggcaaaaaaacttgaaaaaagcaAGTTAAAAACTTTAATGTTTCAACGTA
ATAAATACAAGTAACAATTGAAAACTGCCTTCTGGGATAAATAGCGGTAA
TTTGATTTCGCAAATCAAGGAGTAACTTGCGAATTTTCTGTAACTGTAAC
TTATAGCACGAGGCCCGGAAATCCAGAgttaattttttcgatttaaGAAA
AACCTGAGTTATAGCgtcatttttcataaattttgtcTTGATTTTGACGT
CATCATCAATTTGGTACgattatttttttgcttcctttaatttttcaagt
tgttcttagaattttgactcaaaaaaattTGCTTTCCCTAGTTTTTCGAG
TTGTTTTTTTGTAGTTAACTCGGTTCTTTTAAATGTTAGAGTTATTTTTT
CCTTTAACTTTTGGAGTTATTCCTATTTCACAACTCGGATCTtaattttt
tcgagttattcCTACACAATTTACGAAGAATGACGTCATAGCtcggtttt
ttcgtaactctAAAATATAGatcgaaaaaaataactcgggatttcCAGGC
CTCCTTATGACATGTCCCAAAATACCATAAGTTTCGCGCTAAAAACTGAT
GGCATTAGACttgaaaaatgctgattttgGACGAAAAATGATAACATCAG
CacttaatttttttcagaaacattNTTGATTTTGGACGAAAAATGATGAA
GTCAGCacttaatttttttcagaaacattCACTCCAATTTACTCACAATA
GGGCAAGAGATAATTTTAATAACAGCGATTTCAGGATTCTACATcccaat
acgcttcttttgatatataaatgATCATGTCTGAGGCCTCCAATATTTTG
CGCTTCACTTCTTATAAAACTTTATAAACgaaaaaaaatgtataaaataa
CCACCAAATCTCTTATAAGTCAAATAAATACAAACAATAAATCTCTTATA
AAACTATAGACTCTATAAacgaaaaaatagaaataaaaataaaatcacca
cCATATCTTTAAAGAATACTAACAAAATGAATAAACTACAGGGTTTATTT
AGCTTTCTTGAggaatgaaaatcttttttcaataagaTCTGCATGAATTT
ATAGTCGTCAGGTTGTGCAGGGAGTCAATTTATTCTTTTGAAAACGACTC
TTAATTTTAAAGTACGATGTCAtcataattttctttcaaaatgctcctta
ttttgatatcaaattttcaaaatcattgcATGGTATCCTCAGGGTCTCAA
CTCCCCCTAAGAATTTCTTGTTCCCCCACATGAGCTTCNGTCCTCAGGGT
CTCAACTACCCCCTAAGAATTTCTTGTCCCCCCATATGAGCTTCCCCCCT
TTGGGGTAGAGCCATGCCTGATAAGTCCAAGTCCCCCCTAAGTTAAAATT
TTAACTCATCCCTTAAGACCCAGTAAACCAATGAGTGGTCCGGCCAATAA
TTTAGGACTACAGATCGAGaagaatttttggtaaaatttagaCCCTGAAG
AGCTATTAtggaaatgatgaaaaatctTTGGTTGAAACGTTTCTAGGCAA
CCTTGATTAACGCAAATCTGAAAATGCTGCCCCTACAGAATCTTTTACAT
ATTCTcccattttctcaaatttccaacTCCCCACAAAATATGGGATAAAA
AATTCGTTTGTCCCCCCGACACCATGCATTGTCGTTGagaagatattcaa
ttttgatcATCAGCAAACTTTGCAATCCAGGAAGAGAGGTTTTCTTGAAA
ATGATACCAAGTACTTAACAGTTATCCTAAAGTCTAAAGGAAAAAACCTA
CTAAAAATGTCTCCCCCATGAGTATACCAAAAGCCTGACCTCACTGACAA
GCCATTAGAAAATGACTAAGGTGTAAAGTgaataaaatcaataacaaTAA
ACTATGAATATAATAACAAAATCTCAATAGGCAAAAGAAAATGTACAAGG
GCTCTCTAATTTAAGTCAACTGTGTTTTCCACACGAACAAGCGATCAGAA
AATGACTCTGACTGTCTTGTATAAAGGGTTTATGACTATGACGTGGAAAT
GGAACTTTTGATACAATCTATAAATCTCTTAAATCGGCtcagtcaaaaaa
gtttacCTGCAATGAAATGAGTATTTCTTTATACaatggaacctctaatt
agcggacaccatcggagAGACATCTTGGTGTCCGCTAAACAGGTGTCCAA
TCCCCTTTTGGAGGTTCTACTGTACTAAAAAGTCAGCcaaattcaaaagt
caaattgGTAGATAGAGTCCCTTTTGGCAGCACAATAtattagaataaaa
aaaatgttaaaaatgttaaaaagttcAAAACGTTTAATCTCAAAACCAGA
TTACAAAGAAGTATCACGTTAATTAAAAGCAAGTTCAATCGCAACAAATA
AAAAggtgataaaaaaattatcttccagGAAAATTGATCATCatcaatac
acgggtttcgaattaaatttttgcttagctttagctttgatcccatgtaa
atttgcacgaaaaatatcaagtaaacagaacgaaaattggccgtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029413-exon-sc0000747-1491911889:41004..43698 | TCONS_00029413-exon-sc0000747-1491911889:41004..43698 | Clytia hemisphaerica | exon |
| TCONS_00029413-exon-sc0000747-1510915933:41004..43698 | TCONS_00029413-exon-sc0000747-1510915933:41004..43698 | Clytia hemisphaerica | exon |
| TCONS_00029413-exon-sc0000747-1575043694:41004..43698 | TCONS_00029413-exon-sc0000747-1575043694:41004..43698 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000747 | supercontig | sc0000747:41004..43698 . |
Blast
The following BLAST results are available for this feature:
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