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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029403 ID=TCONS_00029403|Name=TCONS_00029403|organism=Clytia hemisphaerica|type=transcript|length=2491bp
TCCGCCCTTTCCGCCCTCCCCCTGTAATTCGAGTCTGGAATTTATGATTC
AAGTCTGTAGAATACATGCCCTCAAAACACATGATTTTTGACCGATTTCA
GCTTAACAAGATTCCATCCTTCTGTCCTTTGAGTGATCGTTTCCTGATGG
TGGCTTAGCTTGAGCTGAGGAAAAAGTGGAAAGTGGTCATTCACAATGGA
ATCAATGATCAGGAAGGTTGTAGTTGAAGAAGTAACGAAAGCAATAAATG
GAATTAATGATGATAAACCAATTCTTGTGAAAGATGATTCTCCTACTCAA
CCTAAGCCAGCCCAACCCAAGAAAAAGCAGCGTACATTAAATAGAATGAG
TAAATTGCTTGCTACTGttaattcaaaaggaaacaagTCTAAGAACAAAT
CAAGTGACTTTAAATCAATAAAGATTCAAATCAGGTGGCAAAAGAGAGGG
GAAGAAGCTTTCGTGAAAAATGAATATGGAGGTGGGCAAAGGTATGTCCA
ATTTGGCGACCAAGACGACCCTACTTTCCTTGAACTTTTAAGCAAAGGTC
AATCATATTACTACCCAAATGGGGAAAACGGGTTTGAAGAAAAGTTAGAA
AATGCAGTTTGTAAGATTCTCTCTGCTGGTGGACAGAGGATTCCTAACAA
TCAAAAGATTAGAGAATACTTAGATGAAAACGGATGTTTCCCATCAAAGA
CATACTTTGTATTTGAAACAAAAGATTTGTCAGATGATTATGATAATGAT
GACGATGGTGACAACAAACTGGCTCCTTTCCCGTTGAGACCCATCAACCA
AATTTCAGGATCTAGCAAAAGAAAGATTTGTAGCACATGTAGTGGGACTT
ATTTagacttttgtcttcgctgtgATCAGGACCAAGCATTTAAAGAATCT
TTGAATACAGATCagttaaaagaaaaagagaaccAGGAGAACCACCAAGG
AAAGTTAGAGAACAATGAAATTCACAACTTACAAAATACAGATGAAACAA
GGGAAAGTCTTGGAATTGGTGACATTAGACAAAAACGTTTGTCTTTCTTC
AAAGGTGCACCAAACGATAGCTATGACGAGAACTTAGCACTGACCAGAAG
CAAGTTCAAGAGCTCCGAATGGGAACACAAGGAATTTTCAATTAGACGAC
GTTTTGTTGNCAGAAGCAAGTTCAAGAGCTCTGAATGGGAACACAAGGAA
TTTTCAATTAGACGACGTTTTGTTGTTAAAGATGTTTTAACAaagatgaa
aatcttttttcaagatAAACCACTTGAACCTGTTAAGGCAACTTTTTTAA
GTTGTGGAAGTACTGAGGCAGCTGTCGATGATGGCGGGCCAATGAAAGAA
TTGGTTACAATGTTTTATGAGAAGATAAATGGAGTTCTAACTCAAGGACC
ACCCAATAATCAAGTGCTCATCCATGATTCTGCAGTATTGAAAAGAGAAG
ATTACTTCTACTTTGGGAAATTTGTTTCGCTATGCATCCTGCAAGGACTT
GACACACCGAAACAATTTTCCAAAGGCTTGGTTGAATATATTATTGATGG
AAGTCAAAGCTGCTCTTGTACCATAGGGGATATCGTAGACCCAGATTTAT
GCCAAAAGCTTAAGAAGATCATTGATGCATCTGAATCTGAATTTTCCGAA
GCCGTTGACAATTTCCCTGAGAGGTTCGATTTGGGTTATAATGAATTCAA
CCCCAAATTTCTTGATAAGAGTAAGCTCATACAAGCTGTTGCTCACAGTT
TtactgtatcttcaaaactcgAAGAGATACAACAGTTTATGGATGGACTA
GCTACCTTTGGAGTCCTGGATTTGCTTAGACAATTTCCAATTGAGGGAAA
GAAACTGTTATTATTTGAGAACGAAGTTTCACCTGttgcattgaaaaaat
ctttcgtttGCAAACAACAAAATGAGTCGGAacaaaatgttattttcaaC
CTTTACAATCTGATTGACGaaatttcttccaagaagtttaaAAACGTGTC
GGCATTCACCTTCGACGAAGTGGAAGAAGGAATCGTTGCTGACGAGAAAA
AGCGAAACCTGAAATTCACACTCGCagatattttaatgttttttacaGGA
TCAAGGTTTCTCCAACCATCCCTGCAAATACCTGTAAAATTTGACGACAA
ATCAACGCGACGTTTATCCGTGTCTACCTGTTTACCAGAAGTTGTTTTTC
CCTTAAGTGAAAGGTACACTGGAGAAATGTTTTCGGACAACTTCATTGAA
GACGTGTTATGTTCGCCTGGATTTGGTAACGCATGAACAACTTAATGTAA
tgattaaattgatttttacaCGTTGAcacttttgttcattttttagcTAC
TGTTGatatacacgggtttcgaattaaatctggcgcgagagaaaaaatca
agtaaataaaaggagcgataaggggaaatgccttataaaaggttgataga
tttcctttcttctcttttgaaagccaggtgttcattcaaaa Run BLAST on NCBI protein sequence of TCONS_00029403-protein >TCONS_00029403-protein ID=TCONS_00029403-protein|Name=TCONS_00029403-protein|organism=Clytia hemisphaerica|type=polypeptide|length=696bp
MESMIRKVVVEEVTKAINGINDDKPILVKDDSPTQPKPAQPKKKQRTLNR
MSKLLATVNSKGNKSKNKSSDFKSIKIQIRWQKRGEEAFVKNEYGGGQRY
VQFGDQDDPTFLELLSKGQSYYYPNGENGFEEKLENAVCKILSAGGQRIP
NNQKIREYLDENGCFPSKTYFVFETKDLSDDYDNDDDGDNKLAPFPLRPI
NQISGSSKRKICSTCSGTYLDFCLRCDQDQAFKESLNTDQLKEKENQENH
QGKLENNEIHNLQNTDETRESLGIGDIRQKRLSFFKGAPNDSYDENLALT
RSKFKSSEWEHKEFSIRRRFVXRSKFKSSEWEHKEFSIRRRFVVKDVLTK
MKIFFQDKPLEPVKATFLSCGSTEAAVDDGGPMKELVTMFYEKINGVLTQ
GPPNNQVLIHDSAVLKREDYFYFGKFVSLCILQGLDTPKQFSKGLVEYII
DGSQSCSCTIGDIVDPDLCQKLKKIIDASESEFSEAVDNFPERFDLGYNE
FNPKFLDKSKLIQAVAHSFTVSSKLEEIQQFMDGLATFGVLDLLRQFPIE
GKKLLLFENEVSPVALKKSFVCKQQNESEQNVIFNLYNLIDEISSKKFKN
VSAFTFDEVEEGIVADEKKRNLKFTLADILMFFTGSRFLQPSLQIPVKFD
DKSTRRLSVSTCLPEVVFPLSERYTGEMFSDNFIEDVLCSPGFGNA Run BLAST on NCBI transcript from alignment at sc0000747:43965..54436- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029403 ID=TCONS_00029403|Name=TCONS_00029403|organism=Clytia hemisphaerica|type=transcript|length=10472bp|location=Sequence derived from alignment at sc0000747:43965..54436- (Clytia hemisphaerica)
TCCGCCCTTTCCGCCCTCCCCCTGTAATTCGAGTCTGGAATTTATGATTC
AAGTCTGTAGAATACATGCCCTCAAAACACATGATTTTTGACCGATTTCA
GCTTAACAAGATTCCATCCTTCTGTCCTTTGAGTGATCGTTTCCTGATGG
TGGCTTAGCTTGAGCTGAGGAAAAAGTGGAAAGTGGTAGGTATTATTAAT
TAGTGTTATTGTCATATGAAATGGAAAGCTTTTCACTTCTTGTCGATGTA
CATAATGGACCTGTATGTACCGGGATTCCGTATGTACCACTCTACCATTG
GGCCATTCCAGTTTTTATTCATTACCCCCCAATGGACGACATGGAATTTT
ATGGCAAGCGAAAATCACAATTTCGAGAAAAACTAGGTTTTTCTGCAGAA
AACCTGGGTTTTCGGGTGAAAAACCTAGTTTTTCTGTAGAAAACCTAGGT
TTTCTAAAGAAGACACAAGATCTCAGAAAATTCAATTTTTTTGATAGAAC
ATGTCTCCTTTGGTCAATGTTGTTTTGATGAATTACTAAAAGACAAGAAA
TCTCGGTTGACGATAAGATTTGGAAATACTTATAGAATGACAAAAAAGAC
GGGGTAATGTTATTATAATATATATGCACCCGGCACAGTGACAAGCCGTT
ACTAGCAACCCTGACCTAAGCAATTCCAAACAACAAAACCCCCGGAAAAT
TTAAAATGTCGGAATGAGCAATAGACAAACATAACCATGAATTTCTGGAA
AAAAGACCAATATACGCTTCTTTTCAGAAAATCTAAGTTACTTATTCGAA
TTTTACGGCAGACGATTTTTCGATATTAAAAGCGATTATTTAAAAGCGCG
ATTGACAAACCTGAGTTTTCTCTTGAAAATTTATAAGCTCCGGGAAAACC
GGGAAAACCTAGGTTTTCTACAGAAAAACAAGGTTTTTCACCCGAAAACC
CAGGTTTTCTGCAGAAAAACCTAGTTTTTCTTGAATTTATGATTATCGCT
TGCCATAGAATTTCCGTAGCAAATTGCTTTCAAGAAAGTCCGGAATTTCC
GTAACAAATTTACAAAATACCTATCAAAACAGTGGAATTCCGTTACTGTA
ATCTAAAAAAATCATGGAATTCCAATACTTTAGTACAAAATTAAGTAAAA
TTCATGGAATTCCGATACTTTCTCTTTAAAGTTTGCCTGGAATTCCGTGC
CACAATTTAATTCAAAAATTAATGTCATCCATTAGGGGGTAATTTTTTTT
TTCTGGAATGGCCCATTTTTTGTGATGGTTGTGGAGTTGTGGTGCTGAAT
GGTTCAAGTTTTGAAAGATTTCATTGTGGTGTTCTGTCTGGTGTTTCGAG
TCACCCTCAAATAATTCGTGTTTGCCTATTTGAGGGTATCTGGAGGTCCT
TAATCTTTGTCTTGACTTCATTCATTTGAACTGATGTCCAGACGAACTCA
ATCGAACGGAATCGACGATCGAACCAGTCTAACCAAATCAAACGCAATCG
ACCGATTGAAATTCGATTGTCGAACGCAATCGAATCTCAATCGAACGTCA
AAATTCTGAGTAATATTCGATTGGTTTGATTGGTGTTCGACTGGTTAGAT
CGTCAATTCCGTTCGATTGAGATTGTCTGGCTTTATTCTTGCAGCTTCCC
AACATCCAAGCTCTCAAACATCACAAGCCGAATGAAATTACTTATGATTT
CCCGCAGAAATTATGCGATGAACAATCCAGGGGTCAATGAATTGATGATC
AAACGCAATCGAACATCAATCGAATGCAATCGAATATCAATCGAATCTGA
GAATAGCAGTAATATTCGATTGAGTTCGATTTGGTTCGACTGGTTCGATC
GTCAATTCCGTTCGATTGAGATCGTCTGGGAATGTCTTCGGCTATCTTTT
CCCAGACTGCAGACGGATGATGCAGATAAAACCAGACCCATTTATCTGCA
CTCATCAAACCTATTTTCTGACAGAACTCATCAAACTTCATCCAATGTAA
TCGAACGATTAGAGTTCAATGGCCGAACCACATCAAACCTAATTGAACTC
TCACAATTTTCGGTAGAAGTGTGGTTCGATTAGTTCGAGATGGATGAGTT
CAATCATTAGTTTGATTAGTTTGGAATGGATGTGTTCAGTGTTCGATTAC
TCTCAGGTTCCAAATAAACGGGGGGGTTGGAAAATTTTCTAGATTTTAAT
AAACGGGGGGGACCTAATTGCCGGGGGGGTTGGAAATTGTACTTCTGAAA
CCCAAAAATAAGGTAAAAATAGGCTAAAATCAGGCTATTTAGAGCAAAAA
TAAGAGGCCTTCCCCTTGACAGCTGAAAATATTCTTAGAGATTAATAAAC
GGGGGGTCCTAATAAGGTCCGGGGGGGTTGGAAAATTTTCGAGATCGGAA
TAAACGGGGGGTCCTAATAAGGTCCGGGGGGGTTGGAAAATTTTCGAAAA
ATTAACAAGCGGGGGGGCCCGTTTATTTGGAACCTAAGAGTAGTTCTTGG
TTTTCAAGCACAGGGTGATTTTTATAACCCTTTGAATAGCCTGTTAATTA
ATTGTCTCAGAGGGCAGCAATATAAAGGACAGGTGGGGCGTTAAAAGAGA
GCTACATTGATTGGAGAGCAAGGATATTTCGCTGTTTTCAACCCCCGCCG
CCAAATTTTTTTCCTCTCCCACTAACCTAACTTCCGCGATATCACGCAAA
CCTGACTGGTAACCTAGAACTAGTGGCAAAATTACCCACTAGTCTTTTGT
TTAACTTCGCCACTAGGTTGGCTTTTTCGGGTGCTTCCGTAATTTGGTTA
AAATAAGAGGCTCACTTTAGAACACTTCAGACAACATATCTTGTCACTGT
TTGATCATGTCATCATTACAGAAGTAAAGAAGGTGTGATCATGCTCACTT
GTTGTTTTGAAATGACATCATTAGTGTCCAATTCATGTGCCATGATACTA
GTCTGGTTTCCATTCCTAATCAAGTGACACCATTTTTAAATGATTGGTCA
TGTAAACCAGGCATTGTCAAGGTCAAACTTAAAAAATTTAGCTGCTTGAG
GTGTTTTTTTTATAAGCACATTCTTCATTTTCTTCACATTGCAACTATGG
GTGGTCTTCCTTGAACATTGATCTTTCATCTGAGAAGTTAACATAGCAAC
CCATGTTACCCATGGTTGCAGTCTTGAAATATTTGGGTTTGAAGGATTTT
CTTTTGTTTTGATAATTGCTTTCTTTTGTTTATGTCTGCATACCAGCTGG
TTCTTAGCAAATAGATATTCAGCTTACTATCATACACTGCCATTTAAGTA
TAAAAGATTACTTTCTGAATATCACGAATCAAACCGTATCAATGTCATTG
AACTAATTGAACTTCGTACCACGTGCTCTTTGAAGGGTGGTGCTTATTAG
GGTAGGAACTAAGAAATCATCAAACTAATCATATCAATACATCGAACTAA
TCGAACATGACTTCAATCAAACTAATTGAATGTAATTGAACCTTCTCGAA
CTTGATCGATTCGAACTAATTACAAAAAGTTGAAAAGTTTGATTAGTAAA
ACACATCGAATTAGGTTTGAAGTTCGATGTGTTCGCTTAGAAAATCGGTT
CGATGAGTTTGAATAAATGGGTCTGGATAAAACTGATTTTAATCGATTGT
AAGCAATCAATAATTGATAGATAATCGATCGATTGATCAGTAATCCCAAA
TCGATAGATAATCAATTGATTACATATCAATTGGGCAGTTCCAGTTATAG
TCTGTTACTCCCCCCCTGTGGAAGACATGGATTTTCGGCAACAATTTACT
TTTTTAGGATTTCCGTAACTTTTGATATTTTTTAGGGAAATACCTTGGAT
TTTACGATACCTTATCTCAAAATAAAGCAACTTTTATGCATTTTCTGATA
ATTTTGACAAAATAACGAGAAAAAATCCTGCAATTTCCGAAACCTTTTTC
AAATTTTTCAGGAGTTCCAAGTGAAAAAAAAATTCCAAAACTCCTGTTGT
CCACAGGGGGGGTTATGGTTTTTTTCTGCAGAACTGTCCGTTGCAGGTGG
TGATCGATAGATAATTAAGGTCTAAAAAATTCTGTGTATTGATTACTGTA
TTATCTATTACAACAATCTATCGACTACCTAATTATAGATTAGCCATCGA
TTCATAAACAAATCAATAAAATTAATAGATATCATAAGGGAACTAGTTTC
TTCGGGAACTGATTTTCGTGAGAGGGAACTAAATAGAAAAATTTAAGGTG
TCAAGTGCAAAAATTGGTTCCATGAAATATAAATATTTCAAACCCTTGTA
GCGCAAAAATAAGTTCGGTGAAAATTACTTCTTGCGTAAATTAGTTCCCT
TAAAGGGGAAGTTAAGTAATTTCTAGGGTACCCATTTTTTGCTGTTATCG
TCATTATATGACAATATCATGTGCCTCAGGTTACTTTTTATTTGTTGGAA
AATTTTTTCTACGACGTATAGCTCCCTCTTTTTTGCAATAAAAGTGAGTT
TTTAAAGAGAACGCGTTTTTTAAAGAGGAATGGCACAAGCATTTGTTCTG
ATGTAATTTGCTCCAAAAGACGAACAGAAATTTTTCTTTTAAACAAAATC
TGTACTGATAAACAGTGTTTTGTAAAGAGATTCTGCTAGACCTGGCTAGA
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCTAG
CTACAAGATTAGTAAGTCCTTGACCTTTTGTGATAATTTTAGTTTGATGA
AGCAACCGTAAATGCTAGATTTGTAGATGCGGAAAAAGCTTCAGCTCTCC
AGAGGAAAATGTGTCCACGAATAGTCCTCATCCCGATTGGGTAAATCGCT
AATGCCACTTGAATTTTGTGGCTGAAAATGATTCCATCGAGAAAAAAAGA
ATTGACATTATTTTGATTTTGACTTTACTGTGCGAGATTCAAAAGTTCCC
TTGAAGATTCTTCTTCCTTTACTTCTCCTAGAATTTAGAAAAATATACAT
TTGACCCAGTTGCTTTCAGACTTCAATTTCCCACTGGATTAGCTAGCTTT
TAGAAAAACCTACTGGTAAAAACAAGTTCTAGACTTTAGATATAGTACGT
TACGTACGTACGTTAGCATTAACTCACTAACGTTGACTTGTCATGAAATA
GGAATTATTTAACAACATTTTTCTCTTTAAAGAGCGAGGAATGGTCTAAA
TACAATTTTTATATCTCTTGTCTTTCGTGTTTCATAACTATAACTTTACT
TACGGCCTCTTCACATGGAAAGAAGTCCAAAACTTACACAAAGATTCTTT
CACATACCTAGATATTGTGGCTACCATTGAATTTCTATTTAAAAAAAACA
AGGTCTTTGGATTCTAGTATGGTTAGACCGTATAAAACATCAAGTAACGA
AATATTGAAAAAATCAGGGCTTGAAAAAAGTTTTGATCAGTTATGATACA
GCTCTTTTCTACTACAAAGTGGTTTAAAAAAGATTCTTTCTGGAGCAAAT
GAGGTCACACAAAAGAGAGATTAGAAGAAATTTTAAACAAAAAGGGGGTC
TTTTAAACACCGGTTTTTGCGTGTAAAAGAGTATGTGTTTATGAAAGATA
TATTGATGTTTAGACATTGAAGTTGAGATTTTCTTGAATTCTATGATGTT
AGGATTGGTTTTCATTCAAAATCACTTAACTTCCCCTTTAAGGTAATGGT
GATATGGCCTGATTTTCAGAAAATAGATTCTTGTCAGATATGCCAGAATA
AAAAGTTTTTTTTTAGATTTTCTCAATATTGTGCCATTAGATTTTTTAAA
TTTTCGCACAAAAGGGTTTAAAATGGTGATGTAATCTGATGTAATTTGAT
TTTCGAGACAAATTTTTTCCTGTTTTAGTTTACCAGATATGACCACCAAA
TTTCTGCCATGACTACGTGTCTTCTTATCCGTTTGCCTTTTAAGGGCTCT
GACCATGGCGAATTTTCATAATTTGGCATGCACTTAATGTCAATTTGTAT
ATGATGTAGAGAGTTATTCTGTTGGAAAAAATACTTGTGCATCGGAAAAT
CTCAAGGAAAAAATTTCATAAAAAAGAAATTACAACTTTTGCGAAGAAGA
GTATTTCAACTTTGAGAACCTAATAAATGGTGAATAAAAACTTTTTAGAA
AAATTGAGTTAATGTTTTATACAAGAATTATGTTACGTACAGATAAAAGA
AATAAAATAAAAACAAATACAGTTTTTATTACCACCATGATATTAGACAA
TGTGACATTGAATTTTGAGTACCAACCCCCTTGAAAGGAAAACTAGACAT
GTGTGAAAAAAAATGAAGTTTAGGATAAATAAAACAGTATCACTCATACA
ATATCGGAAATGTTTGTCTAGAGATTTTGAAAATGTGACGAAAAAATCAG
TTTTCACTCAAAATATTTATTGTGTCATATTTTATTTGGAAATTATACAG
TATTACTTTAATTGTGTTTATTTATTTACTTTAAGGTCATTCACAATGGA
ATCAATGATCAGGAAGGTTGTAGTTGAAGAAGTAACGAAAGCAATAAATG
GAATTAATGATGATAAACCAATTCTTGTGAAAGATGATTCTCCTACTCAA
CCTAAGCCAGCCCAACCCAAGAAAAAGCAGCGTACATTAAATAGAATGAG
TAAATTGCTTGCTACTGTTAATTCAAAAGGAAACAAGTCTAAGAACAAAT
CAAGTGACTTTAAATCAATAAAGATTCAAATCAGGTGGCAAAAGAGAGGG
GAAGAAGCTTTCGTGAAAAATGAATATGGAGGTGGGCAAAGGTATGTCCA
ATTTGGCGACCAAGACGACCCTACTTTCCTTGAACTTTTAAGCAAAGGTC
AATCATATTACTACCCAAATGGGGAAAACGGGTTTGAAGAAAAGTTAGAA
AATGCAGTTTGTAAGATTCTCTCTGCTGGTGGACAGAGGATTCCTAACAA
TCAAAAGATTAGAGAATACTTAGATGAAAACGGATGTTTCCCATCAAAGA
CATACTTTGTATTTGAAACAAAAGATTTGTCAGATGATTATGATAATGAT
GACGATGGTGACAACAAACTGGCTCCTTTCCCGTTGAGACCCATCAACCA
AATTTCAGGATCTAGCAAAAGAAAGATTTGTAGCACATGTAGTGGGACTT
ATTTAGACTTTTGTCTTCGCTGTGATCAGGACCAAGCATTTAAAGAATCT
TTGAATACAGATCAGTTAAAAGAAAAAGAGAACCAGGAGAACCACCAAGG
AAAGTTAGAGAACAATGAAATTCACAACTTACAAAATACAGATGAAACAA
GGGAAAGTCTTGGAATTGGTGACATTAGACAAAAACGTTTGTCTTTCTTC
AAAGGTGCACCAAACGATAGCTATGACGAGAACTTAGCACTGACCAGAAG
CAAGTTCAAGAGCTCCGAATGGGAACACAAGGAATTTTCAATTAGACGAC
GTTTTGTTGNCAGAAGCAAGTTCAAGAGCTCTGAATGGGAACACAAGGAA
TTTTCAATTAGACGACGTTTTGTTGTTAAAGATGTTTTAACAAAGATGAA
AATCTTTTTTCAAGATAAACCACTTGAACCTGTTAAGGCAACTTTTTTAA
GTTGTGGAAGTACTGAGGCAGCTGTCGATGATGGCGGGCCAATGAAAGAA
TTGGTTACAATGTTTTATGAGAAGATAAATGGAGTTCTAACTCAAGGACC
ACCCAATAATCAAGTATGTTTAGACCATTTTCTATGCATTTTGAGCCTGT
GGTTATCAGGGCTCCCCCTACAAATTACTCCCTCTACATAACCTTTGACA
ATTTTCAATTGTATGCATTCCAAGCTTGGACTCTGTTAACAAAACTATTT
TGAAGAACAGACGCTGTAATAATTACTATTGATTAGATTGATATTCTCAA
CTTCAGTTGATTGAGCTAGAATGGGCTCTTCCAGAAAAAGTTTCTAGGTG
GGTGGATGATATATTGTCTGGGGGGTAGTGAAAAATCGTCAAAATTCTCT
TTGTCCAGGGGTAAATTTGCTCTGTCCAGGGGTAAATTTAAGTGTTTGGG
GGTCAGTAGGTGGTTGTCCAGGGGGGTAAAACCTGTTGTCCGGGGGGACA
AAAGTTACTTTGTCCTGGGGGTAATTTGCAGAAAATTGTCATATATCCTC
CAGCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCGCCCCCCCCCCCCCCAAATACAATTTTTTTTCTGGAAG
AGCCAAATCAGAGAATGCCTGTGTGTCCACCAAAAACTTTGGGACAGTCT
GGAGACTTCTAAAATGGTCAGATTTGACTGAAATTTTGTACGCTTGGTCC
TTGGATAAATACCTGGGGGTGTTTTTTTCTCAATTTTTTGAAAATTTTCA
TTTTTGGGGTCTGGGGATAGGTTTTTACAGGCAAAACAAGCTAATTTGAC
TAAAAAACTTTGGGGCAGCCTGGAGACTTCATAATTGGTTGGATTTGGCT
GAAATTTTGAATATCTGGGGTTTCTTTTTTTCATTTTCTGGGATGAGCCT
ATTGTCAAAAAAGTTGAAATATTTTAGCCAATTAGACTTAAAGAACCCTC
AGATTTTATTGATTAAACTTTTTTTATCAATTTTATAATCGGGCCTACGA
ATGATTCAGACAATACTGAAGTTGAGCCCAGTGCATTGCGCCGATTGCGC
ACGTTCGACTATTGAAAAAAGGAAGTGCTTCAGACGAAATTTTTAGTCGT
TAAATCAATGTACAAGAATAGCTTTCTGCTTTTGAAGGTATTCGGAAAAT
ACTCTCAATACTAATAAAATACTCCCTAAATTGAATTTGTCTTTTATCTG
ATCTAGAAAAAGGATTTTGTTTGAATTTGCATTGTTTTTACTCAGGTGCT
CATCCATGATTCTGCAGTATTGAAAAGAGAAGATTACTTCTACTTTGGGA
AATTTGTTTCGCTATGCATCCTGCAAGGACTTGACACACCGAAACAATTT
TCCAAAGGCTTGGTTGAATATATTATTGATGGTAAGTCATTATTATAGAC
ACACTGTATATTTGTTGCTCTACACCCCGAACCTGTTTACCCGAACTAAT
TAAACAGATTTTTTAATCAAACATAATTGAACAATTAAAATTCAATTATT
CTCAGGCCTCAAGTACTTAATTTGAAAGTTATTAAAGTTAAACCCAGTCT
GTTGCGCACGTTTGACAACCAGAAATGGGTTCAAATATATGACCAAATAG
TTTCTATTTTTTTTATTGATTTTGTTCTAGGAAGTCAAAGCTGCTCTTGT
ACCATAGGGGATATCGTAGACCCAGATTTATGCCAAAAGCTTAAGAAGAT
CATTGATGCATCTGAATCTGAATTTTCCGAAGCCGTTGACAATTTCCCTG
AGAGGTTCGATTTGGGTTATAATGAATTCAACCCCAAATTTCTTGATAAG
AGTAAGCTCATACAAGCTGTTGCTCACAGTTTTACTGTATCTTCAAAACT
CGAAGAGATACAACAGTTTATGGATGGACTAGCTACCTTTGGAGTCCTGG
ATTTGCTTAGACAATTTCCAATTGAGGGAAAGAAACTGTTATTATTTGAG
AACGAAGTTTCACCTGTTGCATTGAAAAAATCTTTCGTTTGCAAACAACA
AAATGAGTCGGAACAAAATGTTATTTTCAACCTTTACAATCTGATTGACG
AAATTTCTTCCAAGAAGTTTAAAAACGTGTCGGCATTCACCTTCGACGAA
GTGGAAGAAGGAATCGTTGCTGACGAGAAAAAGCGAAACCTGAAATTCAC
ACTCGCAGATATTTTAATGTTTTTTACAGGATCAAGGTTTCTCCAACCAT
CCCTGCAAATACCTGTAAAATTTGACGACAAATCAACGCGACGTTTATCC
GTGTCTACCTGTTTACCAGAAGTTGTTTTTCCCTTAAGTGAAAGGTACAC
TGGAGAAATGTTTTCGGACAACTTCATTGAAGACGTGTTATGTTCGCCTG
GATTTGGTAACGCATGAACAACTTAATGTAATGATTAAATTGATTTTTAC
ACGTTGACACTTTTGTTCATTTTTTAGCTACTGTTGATATACACGGGTTT
CGAATTAAATCTGGCGCGAGAGAAAAAATCAAGTAAATAAAAGGAGCGAT
AAGGGGAAATGCCTTATAAAAGGTTGATAGATTTCCTTTCTTCTCTTTTG
AAAGCCAGGTGTTCATTCAAAA Coding sequence (CDS) from alignment at sc0000747:43965..54436- >TCONS_00029403 ID=TCONS_00029403|Name=TCONS_00029403|organism=Clytia hemisphaerica|type=CDS|length=6273bp|location=Sequence derived from alignment at sc0000747:43965..54436- (Clytia hemisphaerica)
GAAGTCAAAGCTGCTCTTGTACCATAGGGGATATCGTAGACCCAGATTTA
TGCCAAAAGCTTAAGAAGATCATTGATGCATCTGAATCTGAATTTTCCGA
AGCCGTTGACAATTTCCCTGAGAGGTTCGATTTGGGTTATAATGAATTCA
ACCCCAAATTTCTTGATAAGAGTAAGCTCATACAAGCTGTTGCTCACAGT
TTTACTGTATCTTCAAAACTCGAAGAGATACAACAGTTTATGGATGGACT
AGCTACCTTTGGAGTCCTGGATTTGCTTAGACAATTTCCAATTGAGGGAA
AGAAACTGTTATTATTTGAGAACGAAGTTTCACCTGTTGCATTGAAAAAA
TCTTTCGTTTGCAAACAACAAAATGAGTCGGAACAAAATGTTATTTTCAA
CCTTTACAATCTGATTGACGAAATTTCTTCCAAGAAGTTTAAAAACGTGT
CGGCATTCACCTTCGACGAAGTGGAAGAAGGAATCGTTGCTGACGAGAAA
AAGCGAAACCTGAAATTCACACTCGCAGATATTTTAATGTTTTTTACAGG
ATCAAGGTTTCTCCAACCATCCCTGCAAATACCTGTAAAATTTGACGACA
AATCAACGCGACGTTTATCCGTGTCTACCTGTTTACCAGAAGTTGTTTTT
CCCTTAAGTGAAAGGTACACTGGAGAAATGTTTTCGGACAACTTCATTGA
AGACGTGTTATGTTCGCCTGGATTTGGTAACGCATGAGTGCTCATCCATG
ATTCTGCAGTATTGAAAAGAGAAGATTACTTCTACTTTGGGAAATTTGTT
TCGCTATGCATCCTGCAAGGACTTGACACACCGAAACAATTTTCCAAAGG
CTTGGTTGAATATATTATTGATGATGGAATCAATGATCAGGAAGGTTGTA
GTTGAAGAAGTAACGAAAGCAATAAATGGAATTAATGATGATAAACCAAT
TCTTGTGAAAGATGATTCTCCTACTCAACCTAAGCCAGCCCAACCCAAGA
AAAAGCAGCGTACATTAAATAGAATGAGTAAATTGCTTGCTACTGTTAAT
TCAAAAGGAAACAAGTCTAAGAACAAATCAAGTGACTTTAAATCAATAAA
GATTCAAATCAGGTGGCAAAAGAGAGGGGAAGAAGCTTTCGTGAAAAATG
AATATGGAGGTGGGCAAAGGTATGTCCAATTTGGCGACCAAGACGACCCT
ACTTTCCTTGAACTTTTAAGCAAAGGTCAATCATATTACTACCCAAATGG
GGAAAACGGGTTTGAAGAAAAGTTAGAAAATGCAGTTTGTAAGATTCTCT
CTGCTGGTGGACAGAGGATTCCTAACAATCAAAAGATTAGAGAATACTTA
GATGAAAACGGATGTTTCCCATCAAAGACATACTTTGTATTTGAAACAAA
AGATTTGTCAGATGATTATGATAATGATGACGATGGTGACAACAAACTGG
CTCCTTTCCCGTTGAGACCCATCAACCAAATTTCAGGATCTAGCAAAAGA
AAGATTTGTAGCACATGTAGTGGGACTTATTTAGACTTTTGTCTTCGCTG
TGATCAGGACCAAGCATTTAAAGAATCTTTGAATACAGATCAGTTAAAAG
AAAAAGAGAACCAGGAGAACCACCAAGGAAAGTTAGAGAACAATGAAATT
CACAACTTACAAAATACAGATGAAACAAGGGAAAGTCTTGGAATTGGTGA
CATTAGACAAAAACGTTTGTCTTTCTTCAAAGGTGCACCAAACGATAGCT
ATGACGAGAACTTAGCACTGACCAGAAGCAAGTTCAAGAGCTCCGAATGG
GAACACAAGGAATTTTCAATTAGACGACGTTTTGTTGNCAGAAGCAAGTT
CAAGAGCTCTGAATGGGAACACAAGGAATTTTCAATTAGACGACGTTTTG
TTGTTAAAGATGTTTTAACAAAGATGAAAATCTTTTTTCAAGATAAACCA
CTTGAACCTGTTAAGGCAACTTTTTTAAGTTGTGGAAGTACTGAGGCAGC
TGTCGATGATGGCGGGCCAATGAAAGAATTGGTTACAATGTTTTATGAGA
AGATAAATGGAGTTCTAACTCAAGGACCACCCAATAATCAAGAAGTCAAA
GCTGCTCTTGTACCATAGGGGATATCGTAGACCCAGATTTATGCCAAAAG
CTTAAGAAGATCATTGATGCATCTGAATCTGAATTTTCCGAAGCCGTTGA
CAATTTCCCTGAGAGGTTCGATTTGGGTTATAATGAATTCAACCCCAAAT
TTCTTGATAAGAGTAAGCTCATACAAGCTGTTGCTCACAGTTTTACTGTA
TCTTCAAAACTCGAAGAGATACAACAGTTTATGGATGGACTAGCTACCTT
TGGAGTCCTGGATTTGCTTAGACAATTTCCAATTGAGGGAAAGAAACTGT
TATTATTTGAGAACGAAGTTTCACCTGTTGCATTGAAAAAATCTTTCGTT
TGCAAACAACAAAATGAGTCGGAACAAAATGTTATTTTCAACCTTTACAA
TCTGATTGACGAAATTTCTTCCAAGAAGTTTAAAAACGTGTCGGCATTCA
CCTTCGACGAAGTGGAAGAAGGAATCGTTGCTGACGAGAAAAAGCGAAAC
CTGAAATTCACACTCGCAGATATTTTAATGTTTTTTACAGGATCAAGGTT
TCTCCAACCATCCCTGCAAATACCTGTAAAATTTGACGACAAATCAACGC
GACGTTTATCCGTGTCTACCTGTTTACCAGAAGTTGTTTTTCCCTTAAGT
GAAAGGTACACTGGAGAAATGTTTTCGGACAACTTCATTGAAGACGTGTT
ATGTTCGCCTGGATTTGGTAACGCATGAGTGCTCATCCATGATTCTGCAG
TATTGAAAAGAGAAGATTACTTCTACTTTGGGAAATTTGTTTCGCTATGC
ATCCTGCAAGGACTTGACACACCGAAACAATTTTCCAAAGGCTTGGTTGA
ATATATTATTGATGATGGAATCAATGATCAGGAAGGTTGTAGTTGAAGAA
GTAACGAAAGCAATAAATGGAATTAATGATGATAAACCAATTCTTGTGAA
AGATGATTCTCCTACTCAACCTAAGCCAGCCCAACCCAAGAAAAAGCAGC
GTACATTAAATAGAATGAGTAAATTGCTTGCTACTGTTAATTCAAAAGGA
AACAAGTCTAAGAACAAATCAAGTGACTTTAAATCAATAAAGATTCAAAT
CAGGTGGCAAAAGAGAGGGGAAGAAGCTTTCGTGAAAAATGAATATGGAG
GTGGGCAAAGGTATGTCCAATTTGGCGACCAAGACGACCCTACTTTCCTT
GAACTTTTAAGCAAAGGTCAATCATATTACTACCCAAATGGGGAAAACGG
GTTTGAAGAAAAGTTAGAAAATGCAGTTTGTAAGATTCTCTCTGCTGGTG
GACAGAGGATTCCTAACAATCAAAAGATTAGAGAATACTTAGATGAAAAC
GGATGTTTCCCATCAAAGACATACTTTGTATTTGAAACAAAAGATTTGTC
AGATGATTATGATAATGATGACGATGGTGACAACAAACTGGCTCCTTTCC
CGTTGAGACCCATCAACCAAATTTCAGGATCTAGCAAAAGAAAGATTTGT
AGCACATGTAGTGGGACTTATTTAGACTTTTGTCTTCGCTGTGATCAGGA
CCAAGCATTTAAAGAATCTTTGAATACAGATCAGTTAAAAGAAAAAGAGA
ACCAGGAGAACCACCAAGGAAAGTTAGAGAACAATGAAATTCACAACTTA
CAAAATACAGATGAAACAAGGGAAAGTCTTGGAATTGGTGACATTAGACA
AAAACGTTTGTCTTTCTTCAAAGGTGCACCAAACGATAGCTATGACGAGA
ACTTAGCACTGACCAGAAGCAAGTTCAAGAGCTCCGAATGGGAACACAAG
GAATTTTCAATTAGACGACGTTTTGTTGNCAGAAGCAAGTTCAAGAGCTC
TGAATGGGAACACAAGGAATTTTCAATTAGACGACGTTTTGTTGTTAAAG
ATGTTTTAACAAAGATGAAAATCTTTTTTCAAGATAAACCACTTGAACCT
GTTAAGGCAACTTTTTTAAGTTGTGGAAGTACTGAGGCAGCTGTCGATGA
TGGCGGGCCAATGAAAGAATTGGTTACAATGTTTTATGAGAAGATAAATG
GAGTTCTAACTCAAGGACCACCCAATAATCAAGAAGTCAAAGCTGCTCTT
GTACCATAGGGGATATCGTAGACCCAGATTTATGCCAAAAGCTTAAGAAG
ATCATTGATGCATCTGAATCTGAATTTTCCGAAGCCGTTGACAATTTCCC
TGAGAGGTTCGATTTGGGTTATAATGAATTCAACCCCAAATTTCTTGATA
AGAGTAAGCTCATACAAGCTGTTGCTCACAGTTTTACTGTATCTTCAAAA
CTCGAAGAGATACAACAGTTTATGGATGGACTAGCTACCTTTGGAGTCCT
GGATTTGCTTAGACAATTTCCAATTGAGGGAAAGAAACTGTTATTATTTG
AGAACGAAGTTTCACCTGTTGCATTGAAAAAATCTTTCGTTTGCAAACAA
CAAAATGAGTCGGAACAAAATGTTATTTTCAACCTTTACAATCTGATTGA
CGAAATTTCTTCCAAGAAGTTTAAAAACGTGTCGGCATTCACCTTCGACG
AAGTGGAAGAAGGAATCGTTGCTGACGAGAAAAAGCGAAACCTGAAATTC
ACACTCGCAGATATTTTAATGTTTTTTACAGGATCAAGGTTTCTCCAACC
ATCCCTGCAAATACCTGTAAAATTTGACGACAAATCAACGCGACGTTTAT
CCGTGTCTACCTGTTTACCAGAAGTTGTTTTTCCCTTAAGTGAAAGGTAC
ACTGGAGAAATGTTTTCGGACAACTTCATTGAAGACGTGTTATGTTCGCC
TGGATTTGGTAACGCATGAGTGCTCATCCATGATTCTGCAGTATTGAAAA
GAGAAGATTACTTCTACTTTGGGAAATTTGTTTCGCTATGCATCCTGCAA
GGACTTGACACACCGAAACAATTTTCCAAAGGCTTGGTTGAATATATTAT
TGATGATGGAATCAATGATCAGGAAGGTTGTAGTTGAAGAAGTAACGAAA
GCAATAAATGGAATTAATGATGATAAACCAATTCTTGTGAAAGATGATTC
TCCTACTCAACCTAAGCCAGCCCAACCCAAGAAAAAGCAGCGTACATTAA
ATAGAATGAGTAAATTGCTTGCTACTGTTAATTCAAAAGGAAACAAGTCT
AAGAACAAATCAAGTGACTTTAAATCAATAAAGATTCAAATCAGGTGGCA
AAAGAGAGGGGAAGAAGCTTTCGTGAAAAATGAATATGGAGGTGGGCAAA
GGTATGTCCAATTTGGCGACCAAGACGACCCTACTTTCCTTGAACTTTTA
AGCAAAGGTCAATCATATTACTACCCAAATGGGGAAAACGGGTTTGAAGA
AAAGTTAGAAAATGCAGTTTGTAAGATTCTCTCTGCTGGTGGACAGAGGA
TTCCTAACAATCAAAAGATTAGAGAATACTTAGATGAAAACGGATGTTTC
CCATCAAAGACATACTTTGTATTTGAAACAAAAGATTTGTCAGATGATTA
TGATAATGATGACGATGGTGACAACAAACTGGCTCCTTTCCCGTTGAGAC
CCATCAACCAAATTTCAGGATCTAGCAAAAGAAAGATTTGTAGCACATGT
AGTGGGACTTATTTAGACTTTTGTCTTCGCTGTGATCAGGACCAAGCATT
TAAAGAATCTTTGAATACAGATCAGTTAAAAGAAAAAGAGAACCAGGAGA
ACCACCAAGGAAAGTTAGAGAACAATGAAATTCACAACTTACAAAATACA
GATGAAACAAGGGAAAGTCTTGGAATTGGTGACATTAGACAAAAACGTTT
GTCTTTCTTCAAAGGTGCACCAAACGATAGCTATGACGAGAACTTAGCAC
TGACCAGAAGCAAGTTCAAGAGCTCCGAATGGGAACACAAGGAATTTTCA
ATTAGACGACGTTTTGTTGNCAGAAGCAAGTTCAAGAGCTCTGAATGGGA
ACACAAGGAATTTTCAATTAGACGACGTTTTGTTGTTAAAGATGTTTTAA
CAAAGATGAAAATCTTTTTTCAAGATAAACCACTTGAACCTGTTAAGGCA
ACTTTTTTAAGTTGTGGAAGTACTGAGGCAGCTGTCGATGATGGCGGGCC
AATGAAAGAATTGGTTACAATGTTTTATGAGAAGATAAATGGAGTTCTAA
CTCAAGGACCACCCAATAATCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029403-exon-sc0000747-1575043694:54252..54436 | TCONS_00029403-exon-sc0000747-1575043694:54252..54436 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1575043694:46574..47801 | TCONS_00029403-exon-sc0000747-1575043694:46574..47801 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1575043694:45156..45291 | TCONS_00029403-exon-sc0000747-1575043694:45156..45291 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1575043694:43965..44906 | TCONS_00029403-exon-sc0000747-1575043694:43965..44906 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1510915933:54252..54436 | TCONS_00029403-exon-sc0000747-1510915933:54252..54436 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1510915933:46574..47801 | TCONS_00029403-exon-sc0000747-1510915933:46574..47801 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1510915933:45156..45291 | TCONS_00029403-exon-sc0000747-1510915933:45156..45291 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1510915933:43965..44906 | TCONS_00029403-exon-sc0000747-1510915933:43965..44906 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1491911889:54252..54436 | TCONS_00029403-exon-sc0000747-1491911889:54252..54436 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1491911889:46574..47801 | TCONS_00029403-exon-sc0000747-1491911889:46574..47801 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1491911889:45156..45291 | TCONS_00029403-exon-sc0000747-1491911889:45156..45291 | Clytia hemisphaerica | exon |
| TCONS_00029403-exon-sc0000747-1491911889:43965..44906 | TCONS_00029403-exon-sc0000747-1491911889:43965..44906 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000747 | supercontig | sc0000747:43965..54436 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000569 | HECT_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004842 | ubiquitin-protein transferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004842 |
ubiquitin-protein transferase activity |
Blast
The following BLAST results are available for this feature:
|
