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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029378 ID=TCONS_00029378|Name=TCONS_00029378|organism=Clytia hemisphaerica|type=transcript|length=1560bp
GGCAAACTTTTGGCTTCGGGTGTTGCTGTAAAAAAACATAGTCATAAAAG
CCTGTATTAAATACGGGTTTCAAGTGTATCAGCCCGTCAGTGTTCTAGGG
TTCTCTATCGAGGATAGAAATTTGGTGACCATCTCCAATATAGAGGTTTC
TCCAAGATGTCAACGTCTAAACAACAAACGGCAAGACGTCACAAAAGTAT
TGAGCTTGGTATCTCTGTGCTCATTATAATCGTTAACACTGTCGAAATTT
GTATCCTTAAACGTCAAAGAAGtaagaaaaatttggaaattgtacttttg
aGCTTGTCAGTAGCTGACCTTCTTTAGGGAATGTTAAACGGCGCATTTCA
AATAGTTCAGATTTACGACATGATGAAGTCGAGTTGGACAAGTTTTCATG
TTATATTTAATGTCCGGCTGTTCTTCATGATGGCTTCCATATTCCATCTT
CTTCTCATCGGAGCAGATCGATTGTTCGCAGTTGCCAGGCCTTTTCAACA
CAATGTTGTTGtcacaaaaagaaaattatactGGACACTCTTTCTGGTCT
GGGTTTTGTCGTTTAGTGGGTTAGGTCTATTTAAGATTTACGACGAATAC
CTCTCGTCAAAAGGGCCAGTGACTAAGCCACATAAACCTCCAAGTAGAAC
ACGAGATTCCATGAttttatatcaaaacatatcttGGAGAGTTGAAAACG
TTTCACAATATAACACTACGCAAAAGTCGAAGAAAACAGATCGAATGGTT
AATGACACTCTCTATTCGTTGGGGTCACCATTTGATATCCACAAAGATGG
TAAGGAAAGTGGAAGAAGAGCTGACCCACCGCCCTCACCAACCGAAGAAG
GAGGACCACCTCCCCCGCCACCCGCACACATACTGAAAAGGATCACCACA
AAAGAAAACATCCTTGCTTATTGTCTTATCGCTGCTGCCATCTCTCTTGT
TATCATGTATTCTGCTATCATATATTTTGTCCAAAATgcgaaacaaaaac
atatccGACGAAAAGTCAGTTTACTTAGTGTCCTCGTCCCAGCTTGTTTC
ATTGCTTTCACGTTACAATATGCAGTAATGAGTTTGTCATCCGACGACAA
AACATTCTTTTTACCCAATGTTCTCCTGCTGACAAACAGTGCTGCCAACT
CCTTGCTCTACTTCTTCAAAGACATCTGTAAGAGAAAAGATAAACGAAGA
AAGACACCACAAAATAAATGTGTAGCAAAAGTCTCAAAAGGAGAAACGAC
CAAAAAACCAATAGACAAGAAGGTGACTTCTAGTGAACATATTGAACTTC
AAGTGACATCTTATTCAGCCCCAAAAGATTGTATCCCAAAAGTTCAAGCT
TAAAGACCATCTCAAAGTCATATTAAATTGGGGCGGAACATTtattttta
tctgatattccaatGGCGTATGGGTGACCACCCacactaaagctctaaag
gagcgtcCCAGTTATAATTTGattagactgggaatccagtcgtttataac
gttcttgttgaaagcgggaaatttttatgtcgggatatggttaaaataaa
cgactgggct Run BLAST on NCBI protein sequence of TCONS_00029378-protein >TCONS_00029378-protein ID=TCONS_00029378-protein|Name=TCONS_00029378-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MLNGAFQIVQIYDMMKSSWTSFHVIFNVRLFFMMASIFHLLLIGADRLFA
VARPFQHNVVVTKRKLYWTLFLVWVLSFSGLGLFKIYDEYLSSKGPVTKP
HKPPSRTRDSMILYQNISWRVENVSQYNTTQKSKKTDRMVNDTLYSLGSP
FDIHKDGKESGRRADPPPSPTEEGGPPPPPPAHILKRITTKENILAYCLI
AAAISLVIMYSAIIYFVQNAKQKHIRRKVSLLSVLVPACFIAFTLQYAVM
SLSSDDKTFFLPNVLLLTNSAANSLLYFFKDICKRKDKRRKTPQNKCVAK
VSKGETTKKPIDKKVTSSEHIELQVTSYSAPKDCIPKVQA Run BLAST on NCBI transcript from alignment at sc0000744:74440..75999 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029378 ID=TCONS_00029378|Name=TCONS_00029378|organism=Clytia hemisphaerica|type=transcript|length=1560bp|location=Sequence derived from alignment at sc0000744:74440..75999 (Clytia hemisphaerica)
agcccagtcgtttattttaaccatatcccgacataaaaatttcccgcttt
caacaagaacgttataaacgactggattcccagtctaatCAAATTATAAC
TGGgacgctcctttagagctttagtgtGGGTGGTCACCCATACGCCattg
gaatatcagataaaaataAATGTTCCGCCCCAATTTAATATGACTTTGAG
ATGGTCTTTAAGCTTGAACTTTTGGGATACAATCTTTTGGGGCTGAATAA
GATGTCACTTGAAGTTCAATATGTTCACTAGAAGTCACCTTCTTGTCTAT
TGGTTTTTTGGTCGTTTCTCCTTTTGAGACTTTTGCTACACATTTATTTT
GTGGTGTCTTTCTTCGTTTATCTTTTCTCTTACAGATGTCTTTGAAGAAG
TAGAGCAAGGAGTTGGCAGCACTGTTTGTCAGCAGGAGAACATTGGGTAA
AAAGAATGTTTTGTCGTCGGATGACAAACTCATTACTGCATATTGTAACG
TGAAAGCAATGAAACAAGCTGGGACGAGGACACTAAGTAAACTGACTTTT
CGTCggatatgtttttgtttcgcATTTTGGACAAAATATATGATAGCAGA
ATACATGATAACAAGAGAGATGGCAGCAGCGATAAGACAATAAGCAAGGA
TGTTTTCTTTTGTGGTGATCCTTTTCAGTATGTGTGCGGGTGGCGGGGGA
GGTGGTCCTCCTTCTTCGGTTGGTGAGGGCGGTGGGTCAGCTCTTCTTCC
ACTTTCCTTACCATCTTTGTGGATATCAAATGGTGACCCCAACGAATAGA
GAGTGTCATTAACCATTCGATCTGTTTTCTTCGACTTTTGCGTAGTGTTA
TATTGTGAAACGTTTTCAACTCTCCaagatatgttttgatataaaaTCAT
GGAATCTCGTGTTCTACTTGGAGGTTTATGTGGCTTAGTCACTGGCCCTT
TTGACGAGAGGTATTCGTCGTAAATCTTAAATAGACCTAACCCACTAAAC
GACAAAACCCAGACCAGAAAGAGTGTCCagtataattttctttttgtgaC
AACAACATTGTGTTGAAAAGGCCTGGCAACTGCGAACAATCGATCTGCTC
CGATGAGAAGAAGATGGAATATGGAAGCCATCATGAAGAACAGCCGGACA
TTAAATATAACATGAAAACTTGTCCAACTCGACTTCATCATGTCGTAAAT
CTGAACTATTTGAAATGCGCCGTTTAACATTCCCTAAAGAAGGTCAGCTA
CTGACAAGCtcaaaagtacaatttccaaatttttcttaCTTCTTTGACGT
TTAAGGATACAAATTTCGACAGTGTTAACGATTATAATGAGCACAGAGAT
ACCAAGCTCAATACTTTTGTGACGTCTTGCCGTTTGTTGTTTAGACGTTG
ACATCTTGGAGAAACCTCTATATTGGAGATGGTCACCAAATTTCTATCCT
CGATAGAGAACCCTAGAACACTGACGGGCTGATACACTTGAAACCCGTAT
TTAATACAGGCTTTTATGACTATGTTTTTTTACAGCAACACCCGAAGCCA
AAAGTTTGCC Coding sequence (CDS) from alignment at sc0000744:74440..75999 >TCONS_00029378 ID=TCONS_00029378|Name=TCONS_00029378|organism=Clytia hemisphaerica|type=CDS|length=1023bp|location=Sequence derived from alignment at sc0000744:74440..75999 (Clytia hemisphaerica)
TTAAGCTTGAACTTTTGGGATACAATCTTTTGGGGCTGAATAAGATGTCA
CTTGAAGTTCAATATGTTCACTAGAAGTCACCTTCTTGTCTATTGGTTTT
TTGGTCGTTTCTCCTTTTGAGACTTTTGCTACACATTTATTTTGTGGTGT
CTTTCTTCGTTTATCTTTTCTCTTACAGATGTCTTTGAAGAAGTAGAGCA
AGGAGTTGGCAGCACTGTTTGTCAGCAGGAGAACATTGGGTAAAAAGAAT
GTTTTGTCGTCGGATGACAAACTCATTACTGCATATTGTAACGTGAAAGC
AATGAAACAAGCTGGGACGAGGACACTAAGTAAACTGACTTTTCGTCgga
tatgtttttgtttcgcATTTTGGACAAAATATATGATAGCAGAATACATG
ATAACAAGAGAGATGGCAGCAGCGATAAGACAATAAGCAAGGATGTTTTC
TTTTGTGGTGATCCTTTTCAGTATGTGTGCGGGTGGCGGGGGAGGTGGTC
CTCCTTCTTCGGTTGGTGAGGGCGGTGGGTCAGCTCTTCTTCCACTTTCC
TTACCATCTTTGTGGATATCAAATGGTGACCCCAACGAATAGAGAGTGTC
ATTAACCATTCGATCTGTTTTCTTCGACTTTTGCGTAGTGTTATATTGTG
AAACGTTTTCAACTCTCCaagatatgttttgatataaaaTCATGGAATCT
CGTGTTCTACTTGGAGGTTTATGTGGCTTAGTCACTGGCCCTTTTGACGA
GAGGTATTCGTCGTAAATCTTAAATAGACCTAACCCACTAAACGACAAAA
CCCAGACCAGAAAGAGTGTCCagtataattttctttttgtgaCAACAACA
TTGTGTTGAAAAGGCCTGGCAACTGCGAACAATCGATCTGCTCCGATGAG
AAGAAGATGGAATATGGAAGCCATCATGAAGAACAGCCGGACATTAAATA
TAACATGAAAACTTGTCCAACTCGACTTCATCATGTCGTAAATCTGAACT
ATTTGAAATGCGCCGTTTAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029378-exon-sc0000744-1491911889:74440..75999 | TCONS_00029378-exon-sc0000744-1491911889:74440..75999 | Clytia hemisphaerica | exon |
| TCONS_00029378-exon-sc0000744-1510915933:74440..75999 | TCONS_00029378-exon-sc0000744-1510915933:74440..75999 | Clytia hemisphaerica | exon |
| TCONS_00029378-exon-sc0000744-1575043694:74440..75999 | TCONS_00029378-exon-sc0000744-1575043694:74440..75999 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000744 | supercontig | sc0000744:74440..75999 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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