TCONS_00029366 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029366
Unique NameTCONS_00029366
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1753

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029366 ID=TCONS_00029366|Name=TCONS_00029366|organism=Clytia hemisphaerica|type=transcript|length=1753bp
TGGATCACTGGTAATCCTGAACAAACTTATCTGGTTGATGCTATCATTCG
CCTTGGTATGGAAGCTCAACCTAATTTCCAAGAAAAATGTTCTCGAATGG
GACTTGATCTTGACGTGGAGATAGTTGACAAATCACAGCAAGACTTACTA
CAAtacattggaaagatattcacGAGTTTACATGGATTGCTCTTACTCCA
AAAGACTTGTCCTTATCCACCAACAGTCTATCATTTGGAACATCTAGGAA
GACTGGTTGCTATGCTATTCGTGTGGGTGGAATCCGTAGATTACGCCTCG
CATCACGAGGCGGTAAAAATCGTTAATCCCAACCGCCAACAGGCGGTGGC
GTGGCTGAACAAAGTGGCGGCGCACGATTttaatttctattgttcctgTT
TATTACCGGCTCCGCCCAAACATGCGAGGGTTGGGCACCCGTGGAACATG
TTGACAAGCGTGCTGCGGAAAGATATGGAGATTTTACAGCGGATCACCAC
ACTGGCCAAGTATGGTTTAGTACCTGAAAATGTCTGGGAAGAAATAATGC
CACATTGGTTCCACGAGATCAAAACTGCCATCCCGGTGTCTGAAATCAAG
AAATTCAAAACCATCTTGTTGGAACTTTTCGACATGAATTCGGAGACACG
TCCGGAGTACGCTATCAATTTCATCCGAAAGAATCTCGAATCATCCATCT
TGAAGCAAAGTCAAGAAGCTCTTGTATGGGTTCAGATTCTTTCCTATCTC
GATGTTCAACTGGAAATCACATCTCTCATTGAAATGTTCATCGAACTCTT
GCTCAACAAAGATGACGGTTTGTCGGCCGTTGATAATAACATACAATCTG
TATTCTCCTTTCCTGATAAAGACACCATCCATAAAGTTACGAGTAGTGGT
ACTCTGTCGCGTCAGAATTCACTCCATTCTACACCGTTGAAATCACCGTT
GGGTGCAACGTTACTGAGTTTGAAAACCGTTCAAGATGATCTGTCAATCA
GTATCCTCATGTTAGATGTCTTGATTAAACAGCTGACGCTGCAAAAATCA
CCATCAGGTAGCGTCTACATTGCTGATAAAGAAAGTATCTCATTAAACGT
TCTCTTATCGCAAATCCTTGACCAATCATTTGAGGGTGAACACGTGGAGT
TGCCAGGATTCAGTTGTCCAAGATGTCAAATCATGAACACTGTTTTTTAC
TTGGTTGCATTGCTGGTTGATCTGGCAATCAAAAGACAAGTGACGTTAGA
TCAAGCTAAAACAGAATATACCAATAGTGTCATTTCTCGGAGAAATTCAA
GCAGTGCTTCCAGGAAATCAAGGGACACAACCTCCTTGAAAAGTCGCTTC
AGTAGCGGAACTCCGGTGAACACTTCAAAACTTGATCAAACGCCATTAGT
GGGCAGCcataatgatgacgtcatcatagaAGAAGATGAGAACGATGGTG
GGGCGGCGGCCGCCAATTCAGTTGTTGACGGTGCTGCCAAATATTTAAAG
GAGAGAGTTTTCCGTGTGGAGTCGGGGCGTTTCAAATCGGATATAAGTGA
GAGCAGTTTGAACAGTATTCCGGAATTGCAGATCTTGGAAAGACTTTTAC
AGGAGCTTTCAGAATGTCATGAATCGTCAGTAGTAGTGCACATTTTAACA
TCTCTGGACATCCTTTGTATTCGTGGCGAATGTTTAGAAATGGTGGCTGA
CCAGGACCTGGATTTGCTGGAGAAATTGCAGCGACACCAACTCATTccaa
agt
Run BLAST on NCBI

transcript from alignment at sc0000744:141096..149512-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029366 ID=TCONS_00029366|Name=TCONS_00029366|organism=Clytia hemisphaerica|type=transcript|length=8417bp|location=Sequence derived from alignment at sc0000744:141096..149512- (Clytia hemisphaerica)
TGGATCACTGGTAATCCTGAACAAACTTATCTGGTTGATGCTATCATTCG
CCTTGGTATGGAAGCTCAACCTAATTTCCAAGAAAAATGTTCTCGAATGG
GGTAAAAAAATGAGTGAAATATTACATTTTTTATAACAACAGGACTTTTC
TAGTTTAACGATTTCAGTGTTTTTTTCAAACTAACATCCATCCTACGGGT
TATCTGATATTCCGATGGCGGATTGGCGGCCGCCCACACTAAAGCTCTAA
AGGAGCGGGCCAATTTCCCATAGGAGAGGAATGGTAGTCGGCCTTTGATG
TGCCGCATCCCAAGTCGGGTTCAACTAGCCTTGGGCGTAAACCTGAAAAT
ATTTCACTTGGACCCGCCAATCTCCGAAAACGAGGTCTGACTTACCAGAC
CTCCCGCTGCAAAATTCCGTAATCTAAACCTTCCAGATGTTGAGAATTTT
TGCGATCTTCAGAGCTTTAGCGTGTCGGATGAAAGTTTCTGCATCTGGGT
GCCAGATAATCCTAAGGGCTGTTTCACAATTAGCGATTTATTAGTGGATT
ATTTTAACGACCAGACTTGAAATAAAGCTTCAACTAAGGAGGTGGTGCCA
GAGGTGACTTAATTGCGTGCTCGCTTTGCGTTCGACTTGACAGAGCCATA
ACCCTTAACCTTGCGGCAAGGAGTTGAGCGCCCTACCATTCCCGACACGA
CTCCGTTTTATCTTTTTGTTGAAAACATTTTACTTTAATGGGATAAATTT
TCGCGGGGATAAAATTTCACGGTTTACCTCACCCGCGAAATTTTAAGATT
TCGTGGGGACTTAATTTTGAGGATAGCACTATAGTGAGACAATATTTTCA
CGATTTTGCGCCTTTTTACGCCAAATTATGCATGTTGGCTGTCGTTAAAG
TATTTCACAAGTATCACAACTCTCTTTCATTGTTTTTGCTATAAAAAAGG
AAAACTAAAATGATGTCAGGTGGAAGAAACCTCATCGCATCGGTAAGCAA
AACATGATCGAAAAGTAACCAAGCGACCTTTTTTGTGTTTTTCAATATCC
TGTTTTCTCCTCTTTATTAGACTTGATCTTGACGTGGAGATAGTTGACAA
ATCACAGCAAGACTTACTACAATACATTGGAAAGATATTCACGAGTTTAC
ATGGATTGCTCTTACTCCAAAAGACTTGTCCTTATCCACCAACAGTCTAT
CATTTGGAACATCTAGGAAGACTGGTTGCTATGCTATTCGTGTGGGTGGA
ATCCGTAGATTACGCCTCGCATCACGAGGCGGTAAAAATCGTTAATCCCA
ACCGCCAACAGGCGGTGGCGTGGCTGAACAAAGTGGCGGCGCACGATTTT
AATTTCTATTGTTCCTGTTTATTACCGGCTCCGCCCAAACATGCGAGGGT
TGGGCACCCGTGGAACATGTTGACAAGCGTGCTGCGGAAAGATATGGAGA
TTTTACAGCGGATCACCACACTGGCCAAGTATGGTTTAGTACCTGAAAAT
GTAAGTTCAAACTCTTTTCAGCTCTTCAAGAAATAAACGATTTTGTAGTT
TTGCTTTTCACTTCACTATCCTTTTAAGTATGGCTTGAAGCGAACGCGTT
TTTCCTTTCCAACAATTTTAATTGCTGGGGCCTGGAGAAAAATGTTTTCT
AAAGTAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGGATAAAATTTCACGGTTTACCTCACCCGCGAAATTTT
AAGATTTCGTGGGGACTTAATTTTGAGGATAGCACTATAGTGAGACAATA
TTTTCACGATTTTGCGCCTTTTTACGCCAAATTATGCATGTTGGCTGTCG
TTAAAGTATTTCACAAGTATCACAACTCTCTTTCATTGTTTTTGCTATAA
AAAAGGAAAACTAAAATGATGTCAGGTGGAAGAAACCTCATCGCATCGGT
AAGCAAAACATGATCGAAAAGTAACCAAGCGACCTTTTTTGTGTTTTTCA
ATATCCTGTTTTCTCCTCTTTATTAGGCTTGATCTTGACGTGGAGATAGT
TGACAAATCACAGCAAGACTTACTACAATACATTGGAAAGATATTCACGA
GTTTACATGGATTGCTCTTACTCCAAAAGACTTGTCCTTATCCACCAACA
GTCTATCATTTGGAACATCTAGGAAGACTGGTTGCTATGCTATTCGTGTG
GGTGGAATCCGTAGATTACGCCTCGCATCACGAGGCGGTAAAAATCGTTA
ATCCCAACCGCCAACAGGCGGTGGCGTGGCTGAACAAAGTGGCGGCGCAC
GATTTTAATTTCTATTGTTCCTGTTTATTACCGGCTCCGCCCAAACATGC
GAGGGTTGGGCACCCGTGGAACATGTTGACAAGCGTGCTGCGGAAAGATA
TGGAGATTTTACAGCGGATCACCACACTGGCCAAGTATGGTTTAGTACCT
GAAAATGTAAGTTCAAACTCTTTTCAGCTCTTCAAGAAATAAACGATTTT
GTAGTTTTGCTTTTCACTTCACTATCCTTTTAAGTATGGCTTGAAGCGAA
CGCGTTTTTCCTTTCCAACAATTTTAATTGCTGGGGCCTGGAGAAAAATG
TTTTCTAAAGTAAAAAAAACTCAACTGCCTATCAATAAAGGTGTTTTTAC
ACGACTGATGAAGACCATGTGTACACTTTATTTATATTCGTTCTTTCCTT
CACTAGGTCTGGGAAGAAATAATGCCACATTGGTTCCACGAGATCAAAAC
TGCCATCCCGGTGTCTGAAATCAAGAAATTCAAAACCATCTTGTTGTAAG
TTGTTCTCTAATTCTATATGTAAGTTCTGATATTCGATACGCTCTATTAT
TCGATGAAAATCGAATTCCCAAAAGTCAAAAAACCGGTTCCCATTTACAT
GACTAGCACTATACGGGCTTGATTACATTTGTCGACTTTGTTTTACCTTT
ACAATAGCACAAAGAAGCCTTGCTGATGTATATCTTTCTTATCACTCAGG
GAACTTTTCGACATGAATTCGGAGACACGTCCGGAGTACGCTATCAATTT
CATCCGAAAGAATCTCGAATCATCCATCTTGAAGCAAAGTCAAGAAGCTC
TTGTATGGGTTCAGGTCAGTATTCATTTGAGCAGCCTACCATATTTAGTC
ATGTCTCCTGGTCGTGAACACGTAAAAATCTAGCAGTCGGTGCATGAAGG
TAGAATATCCAGCTACAGTTCTCCGCAAGGTTGTGGGTTCGTTCCCAGAT
GGGTCAAACTAAAGATTCCCAAAATGGTAGTTGATGTATCTCTGCTTGAT
GCCCAGCAACTAAAAAGACGGTTCAAGGGTAAATGGAGAAATCCAGGGAA
AGAAATGGCACCCTCTCTTACCTTCGGGTAGACAGCTAGAGAAAAAGGAG
TCTTCGGATCGCCCTCAACTGCGATCGCAAACTTACTTACTAAGCTTTCA
GAAAAAAACGAATGTTCTGATGTGTTTTCTTGCTAAAGATGAGGGCTCAT
CATCAGTAATACTATGGTTAACATGAAACCACGACCAGCTAAAAATTTTA
AAGTAAAAAAGTGCGACCGATAAACCGAAAATTTTAACTATCATAATCTT
AATCAGAAAAATAACGAGAAAAGATGTTAAAATTATCTATATTTCGTTTA
TTTCTAATAGAACACATTTTTCATGAGAAATAAAATGGTTGGCATAAAAC
TTGCTCCCATGCCCAGAAATAAAAAGTTAGCAACCTTTGCAGCAGTTTAC
AGGGAAGTTCTTCCATCTCAGACGGATTTCCGTCCCAAGAAATATATATA
AGGCGTTTTTCTGCCTTAAATTTCAGCCTAATTCACCGAAAGTCCAAGAG
AGTGCTAATTGGCTATTTAAAATCCATTTTCCGTCTCAGACCAAGTTTCT
TGCTTATACGAAAAGTTTTTCTTTGATCACTGTTAATTCGCTGTTATGTT
TCAGATTCTTTCCTATCTCGATGTTCAACTGGAAATCACATCTCTCATTG
AAATGTTCATCGAACTCTTGCTCAACAAAGATGACGGTTTGTCGGCCGTT
GATAATAACATACAATCTGTATTCTCCTTTCCTGATAAAGACACCATCCA
TAAAGTTACGAGTAGTGGTACTCTGTCGCGTCAGAATTCACTCCATTCTA
CACCGTTGAAATCACCGTTGGGTGCAACGTTACTGAGTTTGAAAACCGTT
CAAGATGATCTGTCAATCAGTATCCTCATGTTAGATGTCTTGATTAAACA
GGTAAGAAAGCAAACACAGTACACCTTTTCGACCTTAGTCGCGCGGTCAG
GCGTGTGCCACTTTATTATTTAATTATCCCCCCAAACTCGATCCAATTAT
TTTTTGNATACACCCTTTTGACCTTAGTCGCGCGGTTAGGCGCGTGCCAC
TTTATTATTTAATTATCCCCCCAAACTCGATCCAATCCTTTTTTTACACA
TTTTTCTATTGTCTTTAGGTGCGAAAAAAAGACTGGGACGGTTTTAGGGT
GGTAAAACGGACAAAAAAATGCCCTTGCGGCAATTGGCGGCTACGGTCGA
AAAGGTGTATACATTACTATGTCGACATCTAACGTCCAGGCTTTGTACCA
AGATTGTTTTTTGAAGTTTCAAACAGATGCACAGTTGAGAGAGATTGGAT
TTTCATCGAACAAAGAAGCCTATCAAATAGAAGGGCGTCGCTTATAAGCG
TTTCTTGTTAAACGGCCCTCGAATAAACGCCTCTCCTAAAAACTCTAAAA
ATTTGATAAGCGCTCTGGACTTCGGACCTACTTGTTTGTTGAATTGCTTG
CTTATTTCGCACAAATGTCGAGACAGGTAGAGAGAACCATAGACAGCTTT
CAGTTTCAAAGACAACAAAATCGTATAAGATCTATAACTCAGTCATTCTA
ACCAACTCATGAATTCTTATTTTTAAAAGCTGACGCTGCAAAAATCACCA
TCAGGTAGCGTCTACATTGCTGATAAAGAAAGTATCTCATTAAACGTTCT
CTTATCGCAAATCCTTGACCAATCATTTGAGGGTGAACACGTGGAGTTGC
CAGGATTCAGTTGTCCAAGATGTCAAATCATGAACACTGTTTTTTACTTG
GTTGCATTGCTGGTTGATCTGGCAATCAAAAGACAAGTGACGTTAGATCA
AGCTAAAACAGAATATACCAATAGTGTCATTTCTCGGAGAAGTGAGTTAT
GGTTTTTATGTTTTGAACCACAGATCTATAAAGCCCGAAGGGCTAGATAG
GCAACTTTAAGCTTTCTCCAGCAAAAAAAAAAGTGAAGCAAAAATTTGAC
TTTTTAAATTTCGTGCCGATGGATAGGATCTAGCATTTTAATTGTTTTCG
GAGCGCGAGATAAAAAAAGTAGGCGGCAAACGCTCTTTCGCATCTCTCAA
ACCAGTGAAATTGCTTGTTGTCACGTGATTTCTTTGGTAGGAAATCCTAC
CAAAACTTGCTTCACTTTTCGGTAAAGGCCGTGGGTCTACAATCTCCCTC
GAAATATATTGAGATTTTAGTGTATTTTAACGTTTTTCAGAATTTAAAGT
TCGGGCGAGAATTGCTTTTTTAGCACTTCCACTTTCTTCCATTGAATATT
TCGATTTTAGAGGGGTTTGGTGGCTTCTAGGCTATATTCCAAGCCTCATT
CGGGCAAATTTGAGCTTTTAAATCCTGAGATCCTAAGGTCCTAAGTTCTA
AGTCTCATGTTAAAACTCAGAGTTAAAACTCAACTTTCCAACTGTAGTTT
AAGGCGCTTAAAAATCAATTGTGGTGTTCAAAATTACACCGGGAACTCCC
CTTTGTCTCAAATATTTCTTGAAGGATTGTAGCNTTGGTAAAGGCCGTGG
GTCTAGCTTTGAACTCCTTGTATGTTTGATCGTTAGTGAAAGTTTAATTT
TCTGACCGTAGCCAAGGGTGACCCGAAAGCTCTCTACGGAACTTTGGCTT
TTAACCACAAATCTATAAAGCCCTTGACCAATCAGAAGTTTCGTGGATTT
TCGAAAACGATAGCAACAATATCTTTTGCGATGTTTTTTGCTTGGACAAG
CTTAAAGCACTTTATCTAGCCCTTCGGGCTTTACAGAAATCTGTGCTTTG
AATTCCTTTTAAAGATTCTGATGAGGTGGTTGATGCCATTTGGCCTATCT
TTATATTTATGAATACACCGAGCACTTTCAAATATATTAATAACTGAGGT
TTAAGGACAGGAAAGTTATAATAAACTATCAATTTTTACCTGTTTGTAAT
AGTTTTATAAATTCCAACTGTTCTAATTTTTTGGTCTCTATTCCACAACT
TTCTAGATTCAAGCAGTGCTTCCAGGAAATCAAGGGACACAACCTCCTTG
AAAAGTCGCTTCAGTAGCGGTAAGTTTGATTATCAAGAAATTTTAAATGA
GCAGTATCTGCTAGAACGAGGTCTTTTACTAAGAGGGTTATGAGACTTTG
GACTCCGACTATGAGAACTTACAAGCGAACCACTTTGACAGTCCAAGAAC
TGTTAAAAGTATGAAATTATTCGCTACTGTTTTCCAATTTTGACCAGTGA
GTTTTATGATCACATGATCAGAATCCAAGAATGGAAGCCGCTGCAATGCT
ACTCTGCACCAGAGTGTATCTCACTTTATCGCTTCGTAGTACACTCTGTG
CGCATTGTCTGTTTGATAAAAAAAATTCCCGTACGGAGCCCTCTGCGATA
AAGTCTGATTTATAAATAGCAACACTTCTCTCATCGTCTCCCCTCTCTCA
CCGACACTCCATCGCAGCGGTCGGTTTAAAAAATCTCAAGTGTGAAAAGA
AAATGACAACAGACCCTCTACGGCAATGAATTTTGAAAGTAGCTGTAGAT
ACTGGGTCGGTGTACATACAACTGCAATGCTTGACGTGTATATTTGACAT
TGACCATGTGACCAGTTAGCAAAATTTTCGTTCATATTTTGACCATGTTC
TTTATTCAATCGACATATTTGACACAATTTTATATTTCACTAATGAATTT
TTCTCTTTCTGTAGGAACTCCGGTGAACACTTCAAAACTTGATCAAACGC
CATTAGTGGGCAGCCATAATGATGACGTCATCATAGAAGAAGATGAGAAC
GATGGTGGGGCGGCGGCCGCCAATTCAGTTGTTGACGGTGCTGCCAAATA
TTTAAAGGAGAGAGTTTTCCGTGTGGAGTCGGGGCGTTTCAAATCGGATA
TAAGTGAGAGCAGTTTGAACAGTATTCCGGAATTGCAGATCTTGGAAAGA
CTTTTACAGGTTCGGCTTCTCAGTTTGCTGAATTTTCTTCTTCCTTTTGG
TTCATTCGTCCTTTCATTCGTCTTTTAGGACGAATGGTGAAATTTGCATG
GTTATTGTCATAATGATAATTGATTGAAAGGTTGTGTCATATCTCGTACT
TTGATAAGAATTCTAATAACATTTCTAAGATTTAAAACAAATCTTCCATT
CTGCACATACCACGCTCTGCTCTAAAGGAATATGGCCAATGTGACGATCT
GACCTGATCAAAGCGCTGCGCCAATCTGGGCAGATTTTCTTACGGTTTCT
TGACCTTTAGAGGGCATACGTGCCACCGTGGGGTAATCAGAATCTGCTTG
GAGATTATCCCAAACATGGTAAAGTTCTTTACTCTCGTTCTCAAAGATAT
CTTATATAAAACACTAGATAGAGCTTTCCCTACCCTATTAGAAGCAAAGT
AATTCGCCATCTTGAATGAAGTGACGTCACAGTTTAGCTTGCGCGATCCT
TGAAATTTCTAAGTCATTACACAGACAAAAACCAAGGTTTCTGCTGTGAT
CTGCTTTCAGCAAAGACGGAGCATCATTTTGCTTCACCTGTTATGGCTTG
GAAAAGATGGAGTAGCTCTATCTATTGTTTTATATAAGATATCTGTGTCT
TGTTATCCATTTACAGGAGCTTTCAGAATGTCATGAATCGTCAGTAGTAG
TGCACATTTTAACATCTCTGGACATCCTTTGTATTCGTGGCGAATGTTTA
GAAATGGTGGCTGACCAGGACCTGGATTTGCTGGAGAAATTGCAGCGACA
CCAACTCATTCCAAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016747XLOC_016747Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029366-exon-sc0000744-1575043694:149412..149512TCONS_00029366-exon-sc0000744-1575043694:149412..149512Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:148013..148442TCONS_00029366-exon-sc0000744-1575043694:148013..148442Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:146368..146456TCONS_00029366-exon-sc0000744-1575043694:146368..146456Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:146049..146163TCONS_00029366-exon-sc0000744-1575043694:146049..146163Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:144912..145208TCONS_00029366-exon-sc0000744-1575043694:144912..145208Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:143972..144233TCONS_00029366-exon-sc0000744-1575043694:143972..144233Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:142794..142856TCONS_00029366-exon-sc0000744-1575043694:142794..142856Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:141904..142148TCONS_00029366-exon-sc0000744-1575043694:141904..142148Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1575043694:141096..141246TCONS_00029366-exon-sc0000744-1575043694:141096..141246Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:149412..149512TCONS_00029366-exon-sc0000744-1510915933:149412..149512Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:148013..148442TCONS_00029366-exon-sc0000744-1510915933:148013..148442Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:146368..146456TCONS_00029366-exon-sc0000744-1510915933:146368..146456Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:146049..146163TCONS_00029366-exon-sc0000744-1510915933:146049..146163Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:144912..145208TCONS_00029366-exon-sc0000744-1510915933:144912..145208Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:143972..144233TCONS_00029366-exon-sc0000744-1510915933:143972..144233Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:142794..142856TCONS_00029366-exon-sc0000744-1510915933:142794..142856Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:141904..142148TCONS_00029366-exon-sc0000744-1510915933:141904..142148Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1510915933:141096..141246TCONS_00029366-exon-sc0000744-1510915933:141096..141246Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:149412..149512TCONS_00029366-exon-sc0000744-1491911889:149412..149512Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:148013..148442TCONS_00029366-exon-sc0000744-1491911889:148013..148442Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:146368..146456TCONS_00029366-exon-sc0000744-1491911889:146368..146456Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:146049..146163TCONS_00029366-exon-sc0000744-1491911889:146049..146163Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:144912..145208TCONS_00029366-exon-sc0000744-1491911889:144912..145208Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:143972..144233TCONS_00029366-exon-sc0000744-1491911889:143972..144233Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:142794..142856TCONS_00029366-exon-sc0000744-1491911889:142794..142856Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:141904..142148TCONS_00029366-exon-sc0000744-1491911889:141904..142148Clytia hemisphaericaexon
TCONS_00029366-exon-sc0000744-1491911889:141096..141246TCONS_00029366-exon-sc0000744-1491911889:141096..141246Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000744supercontigsc0000744:141096..149512 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.24141	1.41083	2.93102e-05	0.515245	0	0.571615	0	0	1.30103	0.655666	0.454239	1.60006	1.06345	2.79376	0.768452	1.53079	1.40627	1.70646	0.576721	2.94321	2.59759	0.937502	2.04983	1.49244	2.6876	1.50509	2.93128	0.943996	1.68419	0.882442
Blast
[Close]
BLAST of TCONS_00029366 vs. Swiss-Prot (Human)
Match: UNC79 (Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=4)

HSP 1 Score: 134.035 bits (336), Expect = 1.541e-32
Identity = 119/413 (28.81%), Postives = 184/413 (44.55%), Query Frame = 1 
Query:  106 DLDVEIVDKSQQDLLQYIGKIFTSLHGLLLLQKTCPYPPTVYHLEHLGRLVAMLFVWVESVDYASHHEAVKIVNPNRQQAVA-WLNKVAAHDFNFYCSCLLPAPPKHARVGHPWNMLTSVLRKDMEILQRITTLAKYGLVPENVWEEIMPHWFHEIKTAIPVSEIKKFKTILLELFDMNSETRP---EYAINFIRKNLESSILKQSQEALVWVQILSYLDVQLEITSLIEMFI-------ELLLNKDDGLSAVDNNIQ----SVFSFPDKDTIHKVTSSGTLSRQNSLHS---TPLKSPL------GATLLSLKTVQDDLSIS--ILMLDVLIKQLTLQKSPSGSVYIADKESISLNV--LLSQILDQSFEGEHV---ELPGFSCPRCQIMNTVFYLVA-LLVDLAIKRQVTL 1248
            D D +  DK  Q LL   G  F     L+ L       PT    E L RLVAM+F W  S  Y    E   +V   + Q V  WL  V    F+    CLLP P + ARVG  W+   S + +  E L RI  L  Y ++ ++VWE IMP W   I+T +P +++K+F+ +L ++FD+     P   E    FI            ++AL+W+ +LS LD+ + +  LI MF        EL   +   +S +  N+     SV S P +   H + S      Q+   S   +P +SP       G   +      D+++++  ILM D+L+KQ+ LQ      + +  + S+S ++  +++ +    + G H    +     C  CQ     + L   LL  LA K +  L
Sbjct:  486 DFDNKDDDKHDQRLLSQFGIWF-----LVSLCTPSENTPT----ESLARLVAMVFQWFHSTAYMMDDEVGSLVEKLKPQFVTKWLKTVCDVRFDVMVMCLLPKPMEFARVGGYWDKSCSTVTQLKEGLNRILCLIPYNVINQSVWECIMPEWLEAIRTEVPDNQLKEFREVLSKMFDIELCPLPFSMEEMFGFISCRFTGYPSSVQEQALLWLHVLSELDIMVPLQLLISMFSDGVNSVKELANQRKSRVSELAGNLASRRVSVASDPGRRVQHNMLSPFHSPFQSPFRSPLRSPFRSPFKNFGHPGGRTIDFDCEDDEMNLNCFILMFDLLLKQMELQDD---GITMGLEHSLSKDIISIINNVFQAPWGGSHTCQKDEKAIECNLCQSSILCYQLACELLERLAPKEESRL 886
The following BLAST results are available for this feature:
BLAST of TCONS_00029366 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UNC791.541e-3228.81Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE... [more]
back to top