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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029341 ID=TCONS_00029341|Name=TCONS_00029341|organism=Clytia hemisphaerica|type=transcript|length=297bp
TATTGATAAAAATCTACTCAAAGAAATACTTGGGGGTATTGAAGacGAGG
ATTTGGCTGAGTTCTGTAAAGATAACGATTGGAAGATAGATGGGGAGTTT
GTTTCCATTAGAAATCAAGACGCACATGTCAAATCGAAAAATATTAGTGA
GAAAATCACTTTCGAAAACGTGTCACCGATCATCAAGACTTGTACAAGAT
AATTCttttgattttatcattagCTAATTATTTAACACTTTCTTCTACAT
GAAAAACAGACTGTAAAAACTCCCTTCCTATTTGTTGTTCAATTATT Run BLAST on NCBI transcript from alignment at sc0000742:113857..115149- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029341 ID=TCONS_00029341|Name=TCONS_00029341|organism=Clytia hemisphaerica|type=transcript|length=1293bp|location=Sequence derived from alignment at sc0000742:113857..115149- (Clytia hemisphaerica)
TATTGATAAAAATCTACTCAAAGAAATACTTGGGGGTATTGAAGGTAAAC
TTGTCTTTGAAATTTATATTTCCTTATTCAAAACAAACATTTTACTACAG
TTGTCCGTTATTACTCAATAAATTGGTTTTGTCATTTCATAAATTTCTAG
AAAGCTACCACTACTTTTAACTTCCTCATTTGTGTGAATTTCAAAAAAGT
TGTCAAGTCACTCTTATAATAAATCATCCTAAAGAGAATTATGTCAATGT
AATCAAAAACTTCATGTTAAGCTATTTATTATAATGGTCATTTCGGTTAA
TTACCTCTTAATTACCACGTTGTGAACATGAAAGTACACATACTAATTTT
ATTTTATTAGACGAGGATTTGGCTGAGTTCTGTAAAGATAACGATTGGAA
GATAGATGGGGAGTTTGTTTCCATTAGAAATCAAGACGCACATGTCAAAT
CGAAAAATATTAGTGAGAAAATCACTTTCGAAAGTAAGAAATACCTTAGT
TTACAATTGGTTTGCTTTGCTTCTTCTGTTTTCTGTTTACTGCGTTTAAA
GCTGGATGTATTAAATGGTTGTAAAAATTAGTCTGTCACACAAGTGAAAC
ATTATCACAGACTGGGCAAATTCTTTTAATGTGTAGAAAATTTATACAAC
AAGAAAATGTGTTACCTCTATATTATAGTTCAATTTAATTTCAAAGGACT
AAATTTATTATACGAATTGACTTTTTTCCTTGTTTACTCTAACCCAGGGG
GAGGGGAGGTTATCCACTCAATGTACTTACCCATAGGAAGGGTGGGTGGT
GTATTTTCAAGTTAAATTTGAGTAAGTACAGTGTACCAAAGAGATCCAAA
AAGGTTGTACCAAAACTCCAGTCATCAAATTAAGTGCGGGTGTACTAAAA
GGAACCATCGAATCTCATCTGGCGGTGGAAAAAAGTTAGTACAGTGCTGT
ACAGTGTACTAAAAGTAGTCTAATTTTTTTGAAAACAAATCTAAAAATCT
AATTTGCAGTTGGTACCCCTTGTCTAAGCCAGCCTCATTACGCTTTTAAG
GGTTGATAGAAAATGACTGTCAATCTTTTGTTTCTATTTCATTTTAGACG
TGNTTACGCTTTTAAGGGTTGATAGAAAATGACTGTCAATCTTTTGTTTC
TATTTCATTTTAGACGTGTCACCGATCATCAAGACTTGTACAAGATAATT
CTTTTGATTTTATCATTAGCTAATTATTTAACACTTTCTTCTACATGAAA
AACAGACTGTAAAAACTCCCTTCCTATTTGTTGTTCAATTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029341-exon-sc0000742-1575043694:115106..115149 | TCONS_00029341-exon-sc0000742-1575043694:115106..115149 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1575043694:114667..114789 | TCONS_00029341-exon-sc0000742-1575043694:114667..114789 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1575043694:113857..113986 | TCONS_00029341-exon-sc0000742-1575043694:113857..113986 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1510915933:115106..115149 | TCONS_00029341-exon-sc0000742-1510915933:115106..115149 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1510915933:114667..114789 | TCONS_00029341-exon-sc0000742-1510915933:114667..114789 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1510915933:113857..113986 | TCONS_00029341-exon-sc0000742-1510915933:113857..113986 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1491911889:115106..115149 | TCONS_00029341-exon-sc0000742-1491911889:115106..115149 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1491911889:114667..114789 | TCONS_00029341-exon-sc0000742-1491911889:114667..114789 | Clytia hemisphaerica | exon |
| TCONS_00029341-exon-sc0000742-1491911889:113857..113986 | TCONS_00029341-exon-sc0000742-1491911889:113857..113986 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000742 | supercontig | sc0000742:113857..115149 - |
Blast
The following BLAST results are available for this feature:
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