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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029286 ID=TCONS_00029286|Name=TCONS_00029286|organism=Clytia hemisphaerica|type=transcript|length=1534bp
cgacTTAGCTAAGCGcccctctcttattcattatctaagaattgaagcag
gcaaagattaccgcgcggaCTAATAGCGGgcaaaggttatttgaagataa
tttcagttataatccgaggtagaacaaactaaacatagaaagggggtatt
tttagtgctttatacgatgatcggtattttttttgaattctatgtttaga
tttttgtacccagccccgttgctatgtacgcgcgtcctgttgctaagacc
tttggttgaaatcgaaagtgaaaccaaagtagtttagcgcacactgccgt
tcgCGTAATATCAATAAAGTGAAAGAAGGTCCTGACTGGTAAGATGTGTA
AGGTTAAAAAACACCGAACATTTTCCCACTAGAAATCAAATCTCCACGAT
ACAATTGTACAAAGCAAGTCTTtctaaagggttaaaaaaatcggaaaatt
tcaaagcagtaccatagctgtcaactctacTGCATTGGGCGGGAGACTCC
CGCATGCCAACGTTTACTCccacatgaaaaaaattcagctAAATCTTctg
cattttcaggattttctcccACATCTTccgcattttcaaaaaattcagat
tttgaaaaaacggTGTGCATGTGTATGAACAACTCTTTTCTGCTAATCCA
ATGATTGTTGGGGATCATTTAGGCTAGAGCTGTTGCGCTAGCAATAActg
gaaccatttgagctacaaaaacacGGATCGATTTTAATCGAACTGCGATA
AGTAATCTAACTGACGATCTTCCGGTAAAGTCCGTTTATCATTCAATTTC
GTTTGATAAAGTTTGATGGTTCGATTACAAAAATCGGTTTGATAGGATTT
GATTGACATATCACCTGGCTTTATCAGAAAATTTGCAACCTCagcaaaat
tactgtttgtaGCTGGTTCCTAAGGAATTTTGCGGCTCAGTCAGACTCAG
ACAAAGTAAAGTTTTATACTCGCTGTGTGGTTTTCGTAGTTTTCTGTACC
AATTTTCTGTGGTCTTGAGCTTCCCTATTTTAAAATACTAGGGAGATAAT
AGCTATAACAATTAAATTCCTAGAAATCGGAAAATACAACCACGGGCAAG
CTCGCAACCTAATAAGATCACCATGAAAATAGGTTAGGTTTGCATACCTA
AGGTGTTTGTCTTGCAATTCCTGCATCAATAACACGCACGCataatttgt
tgttcttttacaccatatgtagttaattccggtgataaataaagagaaat
gtATTGCTAGgagtggtacagtcacttttggTTGGGGTTGTGGAtagcaa
aatatgaaatttgtcattcttttttgttgttttttatgaaatttgtcgtt
atttttgtctatttttagtaatgcaggatttgtAAGATAGAGCCCCTCCC
TCTATAAATCTCGCTTTACCCACCAAATGTTACCCAACGACCCCCCTTTA
TGCtgaagtttttaattattcaacttgACATCcttatatttaaaaatatt
atttgttggTTAGGATTTCATCTTCATTTATTGA Run BLAST on NCBI transcript from alignment at sc0000735:29111..30644 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029286 ID=TCONS_00029286|Name=TCONS_00029286|organism=Clytia hemisphaerica|type=transcript|length=1534bp|location=Sequence derived from alignment at sc0000735:29111..30644 (Clytia hemisphaerica)
TCAATAAATGAAGATGAAATCCTAAccaacaaataatatttttaaatata
agGATGTcaagttgaataattaaaaacttcaGCATAAAGGGGGGTCGTTG
GGTAACATTTGGTGGGTAAAGCGAGATTTATAGAGGGAGGGGCTCTATCT
Tacaaatcctgcattactaaaaatagacaaaaataacgacaaatttcata
aaaaacaacaaaaaagaatgacaaatttcatattttgctaTCCACAACCC
CAAccaaaagtgactgtaccactcCTAGCAATacatttctctttatttat
caccggaattaactacatatggtgtaaaagaacaacaaattatGCGTGCG
TGTTATTGATGCAGGAATTGCAAGACAAACACCTTAGGTATGCAAACCTA
ACCTATTTTCATGGTGATCTTATTAGGTTGCGAGCTTGCCCGTGGTTGTA
TTTTCCGATTTCTAGGAATTTAATTGTTATAGCTATTATCTCCCTAGTAT
TTTAAAATAGGGAAGCTCAAGACCACAGAAAATTGGTACAGAAAACTACG
AAAACCACACAGCGAGTATAAAACTTTACTTTGTCTGAGTCTGACTGAGC
CGCAAAATTCCTTAGGAACCAGCtacaaacagtaattttgctGAGGTTGC
AAATTTTCTGATAAAGCCAGGTGATATGTCAATCAAATCCTATCAAACCG
ATTTTTGTAATCGAACCATCAAACTTTATCAAACGAAATTGAATGATAAA
CGGACTTTACCGGAAGATCGTCAGTTAGATTACTTATCGCAGTTCGATTA
AAATCGATCCgtgtttttgtagctcaaatggttccagTTATTGCTAGCGC
AACAGCTCTAGCCTAAATGATCCCCAACAATCATTGGATTAGCAGAAAAG
AGTTGTTCATACACATGCACAccgttttttcaaaatctgaattttttgaa
aatgcggAAGATGTgggagaaaatcctgaaaatgcagAAGATTTagctga
atttttttcatgtggGAGTAAACGTTGGCATGCGGGAGTCTCCCGCCCAA
TGCAgtagagttgacagctatggtactgctttgaaattttccgatttttt
taaccctttagaAAGACTTGCTTTGTACAATTGTATCGTGGAGATTTGAT
TTCTAGTGGGAAAATGTTCGGTGTTTTTTAACCTTACACATCTTACCAGT
CAGGACCTTCTTTCACTTTATTGATATTACGcgaacggcagtgtgcgcta
aactactttggtttcactttcgatttcaaccaaaggtcttagcaacagga
cgcgcgtacatagcaacggggctgggtacaaaaatctaaacatagaattc
aaaaaaaataccgatcatcgtataaagcactaaaaataccccctttctat
gtttagtttgttctacctcggattataactgaaattatcttcaaataacc
tttgcCCGCTATTAGtccgcgcggtaatctttgcctgcttcaattcttag
ataatgaataagagaggggCGCTTAGCTAAgtcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029286-exon-sc0000735-1491911889:29111..30644 | TCONS_00029286-exon-sc0000735-1491911889:29111..30644 | Clytia hemisphaerica | exon |
| TCONS_00029286-exon-sc0000735-1510915933:29111..30644 | TCONS_00029286-exon-sc0000735-1510915933:29111..30644 | Clytia hemisphaerica | exon |
| TCONS_00029286-exon-sc0000735-1575043694:29111..30644 | TCONS_00029286-exon-sc0000735-1575043694:29111..30644 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000735 | supercontig | sc0000735:29111..30644 . |
Blast
The following BLAST results are available for this feature:
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