TCONS_00029216 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029216
Unique NameTCONS_00029216
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3284

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029216 ID=TCONS_00029216|Name=TCONS_00029216|organism=Clytia hemisphaerica|type=transcript|length=3284bp
AACAATGACAAAGATGTTTGTAAGGAGGAGGATATTTGGATGTGAGTTGG
TGGTGAAGTGAATCATTCTCTGTTTGGATGCACGTCTGAGAGGAGGTGTC
ACTCGCAACAGAGAGAAGTGAGAAGATGAAGTTGGAATATATTTTGGGCG
TGGCACTGTTGTTGGAGATTGTTGCTGCACAAAGTTCTCTCAACACCATC
AAAGGAGGAAGCATCAGTTACCGATATGATCCTCAAAGTGATGAACATAT
CTTGGTGGACTTCTACTTGAGTGTTGCTAAAGATTCTGATTATGGTAAAG
CTTGTCAACGTGAAACCAAAGAAGGTGAAGAGCACACTCAAAACACTGGA
ATCTCTCTTCGCTTTTGGAGAGGAAGCAGTTATCCAAGATCAACTGACAG
CGGTGCTTTATTTGAATATATAAAGTATTATTGCGAATCACCAGAACCTG
TTACACGGAATTATCCAAGAACGCAACGCCAAATCATCTACGGTACTCAT
CGAGTTCCAAttagcatgtattacttttttgtcgGTTTCAACAATATGGA
CACGGATAACGGAGTGTTAATTACACAATTTTCAAATGCTACCCGACCGG
ACACAAGGGAACGAAACTTGCCAGCACGTGCAGCAGTTTTTGGAATGCAT
ACCGTTTATCACGACGAAGATTCTTTGAAGTTCCTTGTAACGGACACGAA
CCGAGACCACATCCGTTGTGAAGTGGAAGGAAGAATGCTTAATGTCTTTC
TTGGTTGAAGTTGAACGTTTGGTTGCACCTCTCTCCGCCTCTTCTTCAGC
CAGGGCGGAAATCATGGCGGGCGTTCCTTCTTGTCTCTCAATCCANTCTC
CGCCTCCTCTTCAGCCAGGGCGGAAATCATGGCGGGCGTTCCTTCTTGTC
TCTCAATCCACGGTAACGGTGCTCACGTCGAAGAGCATGATGATATCATC
GGTCGAAGCGTCAGAGAGATTGCATACGAGAGAGTTGGAGGACGTCGTAT
CATAACCAGAGCTGATCCACAACGAAGTGGAATCACTTACACTTACAATG
GTACTATCGATAAACATCGTCCTGAAGGGATATATCCAACCTGTTACCGT
ATCGTCACTGCAGATCCCGAAAACAACTACATATATTCCAAACAAGTTTG
CACACAAGTCTCAACTCTTAAAGATGGTTTTGCTTTGAAGACAGAATACA
ACTACCCAAAACACGGGGGTAAAGCAATGGTTGATGACGTCAAAACTTTG
AATGTAGTCGTGCATGGAGCTATGAAGGAACCAACAACGTTCAGTGTCGC
CATCTTGGAATATGAAACAGACAGATCAGTTTATTCTTTCGATTACAACG
AACGTAACATAAAAGAACATTACAAAACGGAAAACGATCCTATAAAATTG
TTCATCACAAATATCACCATCACTCTCCCCTACATGACGTCATTGGTGGC
TAATCGAAAGTATTACGTCATCTTTAACAAGTATCCCTACGCACTACCAG
GGTGTAAAGATCACCAACGAGATTCACCAATGAACAAAGATGAATGGACA
TTCACTACTGAAAcgGTGTCGAACAACCCACCCATGCCCATCGATGGCGG
AGAGATAAAGCATGAAACAGAGTTGATGTGTAAACACGATTCTTTTAGCT
TCACTTTCAAACAACTTCACAATTCCACAATGCCAATCAAAAAAGTGACT
TTGTTGAAGGATGATTGCGAGATGAGATACGATCGAATGAGCAACATATA
CGACGCCTTGAACATCATGTTCACGAAGTGCGGCACACAAATGAGTGAAG
ACGAACATCACATTGTCTTCAGCAATATCGCACGTGTCTATTACACTAAT
AGAACGACCTCCAATTCACTCATCACCCGAACCAAAACCATGAATATCAA
ACTTGAGTGTCGTTTACCAAAGACACAAATCAACACGTTAAGAGGAAAAC
CAACCAGGAATGCAACGGACGGAGGAGACGGTTCTGGACCTGAGGGAATC
GTTGTTGGTCCACAGTTTATCGAAATTCACGACACTGCACGATCAAACGC
TTCATTCCGCATCGATTTCCAAGTTTACAAATCACTCCAATACGGTCACT
CATACGGCAGAGAAGAGTTTCCAATCTATTTGGCTGTCAGTAACAGAATC
TACTTCGAAGTTAGCATcgataaaaaagatttaagcaTCTTACCAAGAAC
CTGTTATGCTACCAAAACACAGAGTTACCAAGATGAACAGAGATATCATT
TGATCCAAGATAGTTGTCCTAAAGACCAGACGTACGTCATGCACAATGAC
AACATCGCTAAAAACAAATTCCGCTTCAGCGTCCAAGCATTCAACTTCAA
AGATGGCGGAGATAGTATTTTCGTACACTGTCATACGTATGTATGCAAAA
ATCAAACGGATGAACAATGTCAATTCGGCTGCCATAACAATGGAAAACGG
TCTCGCAGAAGCATCGAGTTGAAAGAAGAGGTTGAAGGCTACATGACCTC
TACActagaaatcaaaatcaaggGCGACAAGATTGCAGTTATCCACAACA
GATCATCCAGTGATGATGAGACAACAGACGATCAAAGCAAGACTATGTTG
TTGTACCTTCAAATCCCTGTGGCCATCGCTGTCTTCGGTCTCCTTTTCTT
CGCTTACAAATGTCTCCAAAAGAGAAATGCTTCTTCAAATGGTGGTGTCT
TCTTTGAAGAAGAAATGaagttgaagaaaaatgaaatgctGTAAATGCTT
TGTTGTTGTAAGTTAAGGAAGTCAAAAATGCTGGAGAAACTTTCGCTGAA
TTTGTAGAACAAACATCCCTCTACCACTAATGCTGATAAAGAAAAGGCAT
GAGAGTAGCTTAATGTTCATTATAATCGAGCAAGCTCTGGTATNAGCTGA
TAAAGAAAATACATTATAGCAGCTTAATGTTCATTATAATCGAGCAAGCT
CTGGTATCAGCCTCAAAATTGTTTTAGTAATTGCAGCGttgtgttttttt
attaaacactttagatttttgttaaataaattttgtaaccATATGACCTA
GAAGATGTATTTATTGGGTGTATTTAAGTCAAGGAATAGTTTTTCAATGA
ACATATAATCATAGattgtagattttttttcaaatttcgaaatatatttt
caatataattttgttactCGCTAACTAAATATAATTCTTAGAAATTTTCT
ATCCAGGTAGGAAACGTCCCCTTATCTCCCTAGCGATTGAAGGTCAGAGG
TTGTTGCACCAAATTAAAGAGTAAGTGGTTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000730:17594..29837+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029216 ID=TCONS_00029216|Name=TCONS_00029216|organism=Clytia hemisphaerica|type=transcript|length=12244bp|location=Sequence derived from alignment at sc0000730:17594..29837+ (Clytia hemisphaerica)
AACAATGACAAAGATGTTTGTAAGGAGGAGGATATTTGGATGTGAGTTGG
TGGTGAAGTGAATCATTCTCTGTTTGGATGCACGTCTGAGAGGAGGTGTC
ACTCGCAACAGGTTTGTCGGAATTTCTTACCACaccaagctggcacacaa
cgttgtttcaacgttcatctaacgttatatggacgttgtgaacgttagat
aaacgttgaaagaacgttgtgtgccaccTGGGCAATCTAACTTACTTTCA
CATGTGGAGATTTCACATGGAGGAGTTGTATTGCTACACATTCAAAAAGC
GTAGGAGAAGAGTTTCGCACTGTCTTTTCTTCCTGTTCATCCAAAAAGGA
ATTCAATTTAAGTAAAGTTTAGCAAGTCGTTAGGTATGATTGCTATTAGT
GAATAATTTAGAATCGGGACAATATGTTCCAGTAAGATTACACATAAAAT
GCTTTGATTTACCTCTATCAAGACAATtattgaagattttgattttgttt
tcaaacagAGAGAAGTGAGAAGATGAAGTTGGAATATATTTTGGGCGTGG
CACTGTTGTTGGAGATTGTTGCTGCACAAAGTTCTCTCAACACCATCAAA
GGAGGAAGCATCAGTTACCGATATGATCCTCAAAGTGATGAACATGTAAG
AAAGTTTCATTTCACatatttttctccattttactagatacacgtttttt
atgagaacaaactatataaggacatcaccaatttcttagaaaatcgcacg
aaaatattaaaaaaatggtgaaaataagaatattttaagaagatTCTTAG
GCGACgacttcaaaaatttcttccgaAAAGTCTCTTCAAATCACTTTGCA
TTCTAAGACTAAAAGGTGTAGAAActtttgatatttccatattccAAAAG
TGAAAGTAAGATTTCATACAGCTCATGAAAAAGGAAACCAGTGTATTTTC
TTGATGATTAAAAAAGCTTTCTTAGGAATCTGTTCCACTGCAAgactttt
agattttttatgTAATGATCGTAGATGTTTTGCAAAAGTAAGTGTCTTAA
CGCATTAGATTTCGTAGTCTCCTACAATTTGCttcacagcatttttaaac
agaATCCTCCCCCCTTAACGCCCCGTGAGCACAGctaattttgagaaatt
cctcCTTTTTATACCATCAAAGagaattcttgatattcatggcgtaatgt
tttctacggaaataccccagTTTTAGCCAGTGGTGACAAATTTAAACTag
agacaaaagttgtataaaactatgccactactggcaaaaaacGGGGTCTt
tctgtagaaaacattacgtcatgaatatcaagaatttcatTATCACACTA
GCGGTCCCAGACACTAGTTCATTACCTACATCGAAGAATGCATGTAAAAc
tatatattttaaaaagatttaacTCAAAACGATGACCTTGCAGTGCTAGT
TTCCACCACAAACGATTTGCTTCCAAAAAGCTTCAAATTAGAGAGGGATC
CcttagccatcgtggctagccatTGTGTGAAGACATTTGATTGTGACTTT
gaaacactttgaaaatctttgaaaatcgtTGGAAATGTTTCtcgtaaaaa
ttgaaaaatgaaatagtaGAGGCGCTTCTGAAGCTCTTTAAAATACTACA
AATGTAAAGAAATTACGAATTACTCAAAATTCAATGTGGAGGAATGCTGA
AGGTTTCCGCAGCCAATTGTTAAAATCTATAAAAGTCATTGACACTAATC
AGGGAGGCAAAAATTACCAATATCGTTACCTGTGTTTTTGCTAAAAGTGT
TAATCTAAAACAAAACCCCCTGAAAAATATTACGGCATCGCTAGCGAAAA
TCAAAAGGCTGTACAAGAAGGCTTCATACAGGTATTATAAAGATTTGATG
ACGATGTGTTCTGTTTTCCAACTTCTAACAGATCTTGGTGGACTTCTACT
TGAGTGTTGCTAAAGATTCTGATTATGGTAAAGCTTGTCAACGTGAAACC
AAAGAAGGTGAAGAGCACACTCAAAACACTGGAATCTCTCTTCGCTTTTG
GAGAGGAAGCAGTTATCCAAGATCAACTGACAGCGGTGCTTTATTTGAAT
ATATAAAGTATTATTGCGAATCACCAGAACCTGTTACACGGAATTATCCA
AGAACGCAACGCCAAATCATCTACGGTACTCATCGAGTTCCAAttagcat
gtattacttttttgtcgGGTaggtttactttttacttatCAATCTATCTA
TCCATTCGCCATTTGCCTTTCTCAGGACTCTTGGATATCTATCAATCTAG
TACAAATGTGATTGGCAGAGATCACCGAAGACACTAGCTGTAGTGACTTT
GATNCATATATAAAGTATTATTGTGAATCGCCAGAACCTGTTACACGGAA
TTATCCAAGAACGCAACGCCAAATCATCTACGGTACTCATCGAGTTCCAA
ttagcatgtattacttttttgtcgGGTaggtttactttttacttatCAAT
CTATCTATCCATTCGCCATTTGCCTTTCTCAGGACTCTTGGATATCTATC
AATCTAGTACAAATGTGATTGGCAGAGATCACCGAAGACACTAGCTGTAG
TGACTTTGATAAGATATAAAGTcttttggagcttgatttttaaCTAATAT
TTTTAATAATGTTTAATTCCAGTTTCAACAATATGGACACGGATAACGGA
GTGTTAATTACACAATTTTCAAATGCTACCCGACCGGACACAAGGGAACG
AAACTTGCCAGCACGTGCAGCAGTTTTTGGAATGCATACCGTTTATCACG
ACGAAGATTCTTTGAAGTTCCTTGGTAAGGATTACCCTCATCGAGTTTCC
TTTTTAAGAGTTACCCTCATTGAGTTTCATCGTTAAGActacagatttat
aaagcccgaagggctagatggcgtgctataagcttttccaagccttccaa
gcaaaaaaaataaatattggaaaaaatattgttgctatagTTTTCGAATa
cctgcgaagcttctgatCGGTCAGACCGTCAGacattctattgtaatgtc
tcacggtacacttttcagcaaaagcacgactTTTAGCCCGTctggcttta
taaatctacaATTAAGaccttttatttttaaagattcgAGTGCTAAATTA
GAAGATTAAATCTTCGCTTTTGACCACGCTATTCAAGGGTGGCGGGCGTT
TGTTGGGCGTCTATGTAATCGAATACTTTATTTCTCTTTCATTTACAGTA
ACGGACACGAACCGAGACCACATCCGTTGTGAAGTGGAAGGAAGAATGCT
TGTAAGTTCCTCATACCATTaaaaaatgggtgaaaattcATTCTTTGAGG
ATATCTAATCAAATGTTTGTTGTTTCTGTAAAAAAGCTACATTTTCTTAC
TGGCTAAATGACTTTCCTTTTTAATTAGTTTGGCCTTGCCTTAGTAGCAA
ATATTTTATTCTTCAATGATATTTTCTGCTCATCTTTCACTTGAGGAACt
tcaaatcaaaagattttgacTAGTTAGGTTTATAATATTCACCCTGATTC
TCAGGAAGGCTGTGCGTTGAGTCTGCATCATTTGCCAAAGACAAAGAAAT
TCACCAAGACCTTCAACGTGGTAGTCACCAAATTCGCACATTCTTCAATG
AGTTTTTCTTCGCATGTTTCAAGAATGTCTTTCTTGGTTGAAGTTGAACG
TTTGGTTGCACCTCTCTCCGCCTCTTCTTCAGCCAGGGCGGAAATCATGG
CGGGCGTTCCTTCTTGTCTCTCAATCCANTCTCCGCCTCCTCTTCAGCCA
GGGCGGAAATCATGGCGGGCGTTCCTTCTTGTCTCTCAATCCACGGTAAC
GGTGCTCACGTCGAAGAGCATGATGATATCATCGGTCGAAGCGTCAGgta
ttcagtttttttgttttaaatcaaCTACAaatatacagttgacactctct
aatttgaccttcccttattcgataagctcccttattcaatgaaactccaa
ttccccttgaagatcgaattagagagcgttaaCTGTACTTTATTCCATCA
AAGACTCAATGTCTGGAAAAGAAGAAACAAACCTTTTCTTTTAGCCAGTT
ATGGTGGTATTTTAAGAGCGTAAATCATTTACAACCATGTCTAACCCAAA
AAACGTTAATTTGTTGATTCAGAGAGATTGCATACGAGAGAGTTGGAGGA
CGTCGTATCATAACCAGAGCTGATCCACAACGAAGTGGAATCACTTACAC
TTACAATGGTACTATCGATAAACATCGTCCTGAAGGGATATATCCAACCT
GTTACCGTATCGTCACTGCGTAAGGCTCTTTTTACTCTTGTGATACTTTT
CTGTCTCGCTTAAAAGGAAGAAAGAAATCCCAGTTAGGGCAATAAGCTAA
CGAAGAAAATTCCAGGTTTTCTAATTCAACGTTTCCCCTCGTTTATATGA
CGTATTTCCTCCGAAAAACGCCGCCAGGATCTTAGGTAAAATGTTCGTTA
GAGGTCTGCGTTCATAAAGGATTGCTATATTTAAATGGTGGCCGTTTGGG
AGTTTTAAACGACACCACAAATATTGCAAACAAACATTCGAATaggcttt
tccaaaaaagattttacccccactgttgaggctattgatttttcgaagtg
tttagccccctggatatcctctcttataaagatgcttacccctggatatc
gtattttttacttgaaaagacaactttaccccctggatatccgccccctt
gtagatatttaaccccctggatatccacttttgaacaaaaattgttaaCC
CCCTTGGATATCTGATATCTTCaacacggactatttctggaaaagcccaa
tatagATAAGACCTGATCAATTCGCAATGATTATGCTTGTATACACAAAC
TGAGAAGAGTCCCTTTCTTCTTTATAGAGATCCCGAAAACAACTACATAT
ATTCCAAACAAGTTTGCACACAAGTCTCAACTCTTAAAGGTAGGTTTCCA
TTGACAGTTTGAAAGGTAAGGTTTAGTTTATAGTAGCAACGGCATACTTT
AAGACGACTTTTTTTCCACTGGGACGTCTACTTATGTTGCACttatatta
cacgtttttttttgaaGTAATTTTCATATAAGCGTTCAAGGCCTATTTTT
CTCGTCCAAAGGTAACAAAAATTTCGAATTGTTGCCCATTGTAGTGAATT
AGTTTTGAAATGTTTCCTTATCATATTTTCGGCAGATGGTTTTGCTTTGA
AGACAGAATACAACTACCCAAAACACGGGGGTAAAGCAATGGTTGATGAC
GTCAAAACTTTGAATGTAGTCGTGCATGGAGCTGTAAGTTGTTGGTTCAT
TCAACGAATAACTAATTTAGAAAATTGCAACTCTTTATTAAACATGACAA
CCTGGTTAAATTGATCGAAATTAAAAAGAACTTAAACAAATTTATTCAAG
AAGAAAGGCAGATATTTTTCACGAGGAATCTCCTCACTAGATCCCATACT
ATCAGCTGCAGAAAACCTGTCGTTATTccgaatacaccttttcaaccgta
gccgcCAGTTGCCGTGCGGGTATTTTTTGTTTcgccaccctaaactcgat
ccaatcctttttttgacacatttttctattgtctatagatgcaaaaaagg
actgggatggttttagggtggtaaaacggagcAAATAGTGTCGAAaaggt
tgaaaaggtgtattatctTCCCATACTAATGAACTTCCACATTGGGAAAT
AAATTCATTGGCTAACAACACCACGGTTTTCAAATCATCGAGCTCAAATC
CGGAAGGGCTAAAAGTGAAATCTCTTTCGTGGAAAATAAAGCCACATAAA
ATTCATTGTCATAGTCTGTGTCAGATTCGTAGCAACCGTAGTGGTAGAAG
GTTGTGGgttcataccaaagatttccaaatgGTACTtggtgcctctctgc
ttgatgctcatgCAGCAATTAAGACAAgagtcaagggtaagtggagcaat
ccagggagaaagagtggcgccctcccctaccttcaaGTAGATAACTATCA
AAAGAGGAGCCTCCGGgccgcctccgactgcggtcgcagactatGTCACA
TTTAAAATATATGTAaggtgaaaacaaacaaaaggcTAGATCCAATCCGT
CATTCTGAATACGGTGCAAATTTTAAGGTGGTAATATATCTTGCGATTAT
TGTCTTTCTTTCAGATGAAGGAACCAACAACGTTCAGTGTCGCCATCTTG
GAATATGAAACAGACAGATCAGTTTATTCTTTCGATTACAACGAACGTAA
CATAAAAGAACATTACAAAACGGAAAACGATCCTATAAAATTGTTCATCA
CAAATATCACCATCACTCTCCCCTACATGACGTCATTGGTGGCTAATCGA
AAGTATTACGTCATCTTTAACAAGTATCCCTACGCACTACCAGGGTGTAA
AGATCACCAACGAGATTCACCAATGAACAAAGATGAATGGACATTCACTA
CTGAAAGTAAGaccttttcacttttctttctGATATCTTACtaattcata
atatgcaccattacaatgtcttccacagacacaacagctgattggttgaa
agtgacgtattgactgattttacgtcacttacaaccaatcagctattggg
tccatgatataatgtcagaagacattgcatccATATCATGAATAACTAGA
AGCAGATTTGGTGCCAGATGTGGAGCTTTTTTTTTCCTACATACACCACC
AGATCCGAAGGTGAGGAAAGTGTTAATATTTTGAAGGTGTGAATAATGGA
ATTCAGCCAGGACACCATTAGAATTTTTGAGGATGCCTACCTATGAAgca
aaaaagaagtaaatttcaaattttcaaatgaacaTATAAAGAACATTGAT
AAACCAatcaattcttgatatgcgtaagtcaagatgacgtcatattttca
aCGGAAACGCCCAAaaaaaagccggattttgacctccgtgtttctatttt
tagtaacagagtcACATTTTTTCCActtgaaaaatgacttacgcatatca
agaattcaaAACACGTGAGATGTTTNGCAGAGAGGGGTCACATCCCGGat
ttttttgggtgtttccgcttgaaaaatgacttacgcatatcaagaattca
aAACACgtgagatgtttttttttctttcagcgGTGTCGAACAACCCACCC
ATGCCCATCGATGGCGGAGAGATAAAGCATGAAACAGAGTTGATGTGTAA
ACACGATTCTTTTAGCTTCACTTTCAAACAACTTCACAATTCCACGTATG
TTGTCTcgttcagttttttttttcaatttgatacaacacccctgtgtcac
agacccgctgggaccccagcaccattggaaaatttggcaaaaaattcgTC
ACCATTGGGAGAACACCCTGAAATTCCACCCCCACTGagaaatttacttt
gatttcatccctatccgaaattcaatgtttaaaaatgacACTCCAAAACT
ATTCCCACTGGAATTTGTGaccttagaacaatagaatttctatccccatt
ggaatttcaataggaatttttatcttcAGTGAGGTAAAATTTCCACCGGG
GCTaggagacaggggtgtgctATAATTTTGAACTGTAACTTTTGATGTGT
TTATACCGTTTTTTGACGTTTACACAAGGCTCACAAAGTTCATGTAACGC
TCGATGAACGCTGAAACACAGCTTGTTTGTGGCAGCTGGATTCTCTCTCT
TATGAagaagacacccccttctcacagacgcTGTTGgatcccttcccact
ggaaaaatgcccaaaaaatcgtccccagtggaaaattatactgcGAATAT
TGGCTctatttaaaatattcaaataaactaatcctcactgcaaaatatta
tatgCTATGTTTTGTATCCCCACTGAACTTggtgacttgaaaacaatgga
atctAAATATCCACATCGAGTTTCGGTCCGttattttacccccactggct
gagaAAATCCTACCGTTTCTGTAAGAATGGGGTGTAAGAAGTGCCACTAA
GAGTGGTTTCGTTACCCCAGTGCAACTTGTGAGCGCTGttagaatcataa
aaaaaaacaaacgagGGGTCTGTGTATGAGTTTTGTTACTGGTATTCTGG
GTGGCAAGTTACTGGGAGTAGAGAGTTGTGTGACGCTCCATCTCAGCATT
TGATGTAAAATGTCTAGCGCAAAtggaaaaggggatagactccctcactc
tcTCACTCTatgctccgccgacagccaccagatgaatatagtTATTTACT
TTACTTTTTATCAATTTACAGAATGCCAATCAAAAAAGTGACTTTGTTGA
AGGATGATTGCGAGATGAGATACGATCGAATGAGCAACATATACGACGCC
TTGAACATCATGTTCACGAAGTGCGGCACACAAATGAGTGAAGACGAACA
TCACATTGTCTTCAGCAATATCGCACGTGTCTATTACACTAATAGAACGA
CCTCCAATTCACTCATCACCCGAACCAAAACCATGAATATCAAGTAAGCT
TTTTTATGACATCGCCTGTGCGCCTGAGATTAGATTGTtattgttttctg
cacaccacgcggATCTCTAAAGAGATGTATGAAAACCACTGACCTTTGTA
TATCCCTTGACCAAGTCACTCAATGCTGGCCaaacaaaatattatgatca
gagtttttttgaaattggtacccacGGTGAGAGCGCTAGATTAGTTTCGT
TTGTACACTAATGATGTAGCACCGTTTGTCTTtaaggcaaagtttcaaac
cctacaatagcttctttgcgggtaccaactTTTAAAagaacttcgatcaa
agatggcggatatagcttggtccagggatatataaaacTCAGTAATGAAA
ATAAACCATTTCTCAGGAGTAGGAATGAACACGGAGTTGCGTAACGACAA
TTGAAATAGAGCGATGTATATTGGAAACAAGATAAAGTTTTAACATCCCG
CTTGAAACAAGATTTTTGTAATAGAAGTCACTATTATACTCAGATAGTtc
attttcaagcgcctttataggtttaccgtgcacgtaagaaagtTGTTGCA
ATCTGTTATCAGAATACCATTTTCTAGATCCTATCGGACTTCTTTTACTT
CAGTCGGCAGGGATTTTAAGCTTAAATATATTCAATTGATTCGGGAACAG
GCttatatatttcaatttttttaaaaatttaaaaacacacTACTGCCAGT
TTCACATTTAATGCGAACATCAGGTATAAAAATTCTCTGTACAATATGGT
ATAAATACTTATTCTACAGGGTGtccagaaaaaaagtaaatgaagacttt
tacgaagaaaagtttttgaactttgaagagcttattctTTCTTTCATTTA
TGTAGACTTGAGTGTCGTTTACCAAAGACACAAATCAACACGTTAAGAGG
AAAACCAACCAGGAATGCAACGGACGGAGGAGACGGTTCTGGACCTGAGG
GAATCGTTGTTGGTCCACAGTTTATCGAAATTCACGACACTGCACGTATG
TCCATCTCCTTCTTTCTATGAagtgttttataagaaaattcatcccagct
ggcacacaacgttgtatcatctaacgttatatggacgttgtgaacgcatc
taacgttatatggacgttatatggacgttagataaacgttgaaacaacgt
tgtgtgccagctgggtaaagCTTAGAACCTATTACTGCACCTCCGTGTAG
TCTCCTTCCTGTTGTTTTCTCCCTTTGAGTCTTTCCTCGTGTGAGTCTCT
CACATCAAAAGTCTTTGAAAAAGTTGTCCAATTTCTCACCGGACAGAATC
AACTTCCAAACAGGATAACTTACGAACTTGAATTTGAAAGCcataaaaag
agaaatatttcaTTCTGACTGGCAAAAACTTCCACCAGATCATTGAGACA
GGGTGGTATTCTTAGGTGTCCAATGAATACCCCAACTGCTtataaatttt
cgattttcggggATATTTATATCTGACAAGTAAATACTCCTCGCTTATTA
AGCACGTGAGAGTAAGTTTGTAAAacgataaaaatattttgtacaattat
taTTAGGATCAAACGCTTCATTCCGCATCGATTTCCAAGTTTACAAATCA
CTCCAATACGGTCACTCATACGGCAGAGAAGAGTTTCCAATCTATTTGGC
TGTCAGTAACAGAATCTACTTCGAAGTTAGCATcgataaaaaagatttaa
gcaTCTTACCAAGAACCTGTTATGCTACCAAAACACAGAGTTACCAAGAT
GAACAGAGATATCATTTGATCCAAGATAGGTAGATACCCTGATTTGAACC
TCTACATTATGATAACTGGCATCTCATGAAAGAGGATGCCTGAGTCTGTA
TTGAGTGGTCTAAGAATTGTCTCCTTTTTAATCGTCTAAACTGTAGTTTA
TAGTACCTACAAGCTTGTTTTTTTGATCAAGTGCGTTAATCCGACGTGAA
CCACTAGGGAACAAGGCTAGCGCATTTCCACCACGATGTAGTGTGAAATC
AATGACTAGCACAGTAACTGATAATACTTGAGTTTCTGTCCACCCAATTC
CTAATACACACAAGATGGATAGGCGAACTTGTTTGTTTCTCGATATTGGG
AGTAGTCTAAAGCTTTGGCTGATAGGAAAACACTTCAGTTTGAATTTAGT
TCTTACAGTCCGAGTCAAAGCTGACTCTTTTAGTTTAGCTAACCGTtgca
taaaaatattttctttcctcTCGACCACAGTTGTCCTAAAGACCAGACGT
ACGTCATGCACAATGACAACATCGCTAAAAACAAATTCCGCTTCAGCGTC
CAAGCATTCAACTTCAAAGATGGCGGAGATAGTATTTTCGTACACTGTCA
TACGTATGTATGCAAAAATCAAACGGATGAACAATGTCAATTCGGCTGCC
ATAACAATGGAAAACGGTCTCGCAGAAGCATCGAGTTGAAAGAAGAGGTT
GAAGGCTACATGACCTCTACActagaaatcaaaatcaaggGTAAGTTATA
CATAGTAACTACCCTTTTATAATTTCAACTAGGTTAAAGCATGGTATAAG
AAAGCCGTatggttaaaggttttatttttaaataagtgtTTCCGAATTCA
TATTAGAtacatattttatatcaggacagtgtctgtctattgttatatta
tgcagatataagcaaaaaatatttttcttttcctctttctgactaatctt
gctccactccaaatgtgaaaaagctcgtaattaaaattgatgagtaagca
aacgatatcactcttatttaaaaacaaaaaccttaaACTCGACTCTATTC
AAATCTTGATTAAAATAAGCCAAGTCTTTCCTTGCCTTGCTTCTTTAAGC
AATTTTGAAGGGCAAAAGTATTTTCACAATCACTTTACCAACACGATTCC
tttattcaaaacatttttgttcTAATCACCTAGGCGACAAGATTGCAGTT
ATCCACAACAGATCATCCAGTGATGATGAGACAACAGACGATCAAAGCAA
GACTATGTTGTTGTACCTTCAAATCCCTGTGGCCATCGCTGTCTTCGGTC
TCCTTTTCTTCGCTTACAAATGTCTCCAAAAGAGAAATGCTTCTTCAAAT
GGTGGTGTCTTCTTTGAAGAAGAAATGaagttgaagaaaaatgaaatgct
GTAAATGCTTTGTTGTTGTAAGTTAAGGAAGTCAAAAATGCTGGAGAAAC
TTTCGCTGAATTTGTAGAACAAACATCCCTCTACCACTAATGCTGATAAA
GAAAAGGCATGAGAGTAGCTTAATGTTCATTATAATCGAGCAAGCTCTGG
TATNAGCTGATAAAGAAAATACATTATAGCAGCTTAATGTTCATTATAAT
CGAGCAAGCTCTGGTATCAGCCTCAAAATTGTTTTAGTAATTGCAGCGtt
gtgtttttttattaaacactttagatttttgttaaataaattttgtaacc
ATATGACCTAGAAGATGTATTTATTGGGTGTATTTAAGTCAAGGAATAGT
TTTTCAATGAACATATAATCATAGattgtagattttttttcaaatttcga
aatatattttcaatataattttgttactCGCTAACTAAATATAATTCTTA
GAAATTTTCTATCCAGGTAGGAAACGTCCCCTTATCTCCCTAGCGATTGA
AGGTCAGAGGTTGTTGCACCAAATTAAAGAGTAAGTGGTTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016632XLOC_016632Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029216-exon-sc0000730-1491911889:17594..17704TCONS_00029216-exon-sc0000730-1491911889:17594..17704Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:17594..17704TCONS_00029216-exon-sc0000730-1510915933:17594..17704Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:17594..17704TCONS_00029216-exon-sc0000730-1575043694:17594..17704Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:18102..18238TCONS_00029216-exon-sc0000730-1491911889:18102..18238Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:18102..18238TCONS_00029216-exon-sc0000730-1510915933:18102..18238Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:18102..18238TCONS_00029216-exon-sc0000730-1575043694:18102..18238Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:19525..19811TCONS_00029216-exon-sc0000730-1491911889:19525..19811Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:19525..19811TCONS_00029216-exon-sc0000730-1510915933:19525..19811Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:19525..19811TCONS_00029216-exon-sc0000730-1575043694:19525..19811Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:20266..20417TCONS_00029216-exon-sc0000730-1491911889:20266..20417Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:20266..20417TCONS_00029216-exon-sc0000730-1510915933:20266..20417Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:20266..20417TCONS_00029216-exon-sc0000730-1575043694:20266..20417Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:20842..20894TCONS_00029216-exon-sc0000730-1491911889:20842..20894Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:20842..20894TCONS_00029216-exon-sc0000730-1510915933:20842..20894Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:20842..20894TCONS_00029216-exon-sc0000730-1575043694:20842..20894Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:21267..21490TCONS_00029216-exon-sc0000730-1491911889:21267..21490Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:21267..21490TCONS_00029216-exon-sc0000730-1510915933:21267..21490Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:21267..21490TCONS_00029216-exon-sc0000730-1575043694:21267..21490Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:21766..21912TCONS_00029216-exon-sc0000730-1491911889:21766..21912Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:21766..21912TCONS_00029216-exon-sc0000730-1510915933:21766..21912Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:21766..21912TCONS_00029216-exon-sc0000730-1575043694:21766..21912Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:22521..22582TCONS_00029216-exon-sc0000730-1491911889:22521..22582Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:22521..22582TCONS_00029216-exon-sc0000730-1510915933:22521..22582Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:22521..22582TCONS_00029216-exon-sc0000730-1575043694:22521..22582Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:22829..22926TCONS_00029216-exon-sc0000730-1491911889:22829..22926Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:22829..22926TCONS_00029216-exon-sc0000730-1510915933:22829..22926Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:22829..22926TCONS_00029216-exon-sc0000730-1575043694:22829..22926Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:23808..24099TCONS_00029216-exon-sc0000730-1491911889:23808..24099Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:23808..24099TCONS_00029216-exon-sc0000730-1510915933:23808..24099Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:23808..24099TCONS_00029216-exon-sc0000730-1575043694:23808..24099Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:24774..24888TCONS_00029216-exon-sc0000730-1491911889:24774..24888Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:24774..24888TCONS_00029216-exon-sc0000730-1510915933:24774..24888Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:24774..24888TCONS_00029216-exon-sc0000730-1575043694:24774..24888Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:25915..26136TCONS_00029216-exon-sc0000730-1491911889:25915..26136Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:25915..26136TCONS_00029216-exon-sc0000730-1510915933:25915..26136Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:25915..26136TCONS_00029216-exon-sc0000730-1575043694:25915..26136Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:26999..27138TCONS_00029216-exon-sc0000730-1491911889:26999..27138Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:26999..27138TCONS_00029216-exon-sc0000730-1510915933:26999..27138Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:26999..27138TCONS_00029216-exon-sc0000730-1575043694:26999..27138Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:27700..27922TCONS_00029216-exon-sc0000730-1491911889:27700..27922Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:27700..27922TCONS_00029216-exon-sc0000730-1510915933:27700..27922Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:27700..27922TCONS_00029216-exon-sc0000730-1575043694:27700..27922Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:28374..28633TCONS_00029216-exon-sc0000730-1491911889:28374..28633Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:28374..28633TCONS_00029216-exon-sc0000730-1510915933:28374..28633Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:28374..28633TCONS_00029216-exon-sc0000730-1575043694:28374..28633Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1491911889:29077..29837TCONS_00029216-exon-sc0000730-1491911889:29077..29837Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1510915933:29077..29837TCONS_00029216-exon-sc0000730-1510915933:29077..29837Clytia hemisphaericaexon
TCONS_00029216-exon-sc0000730-1575043694:29077..29837TCONS_00029216-exon-sc0000730-1575043694:29077..29837Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000730supercontigsc0000730:17594..29837 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0115375	0	0	0	0.0155589	0	0.222499	0.263847	0.153447	1.2397e-09	0.128579	0	0.0306929	0	0	0.0140612	0.260951	0	0.147175	0	86.4154	55.1542	41.6538	49.5226	8.58772	18.3859	1.47251	5.27842e-09	0.0512228	0.026094
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029216 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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