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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029199 ID=TCONS_00029199|Name=TCONS_00029199|organism=Clytia hemisphaerica|type=transcript|length=2309bp
acaaaagctcaaaatgtaTTCATATTCTGTTATTAAACTTTAGaataaat
atttctttaattAATGTAATTGTATATGTTAGCTCTACCTAAACAATGAC
GCAAACTCATTACTATTGATGTCATTTACTTGACTTATTGACCTCTTGAA
GGTTTGGTTTCTCGATATTGTTAAAAAGTACCCGTCCTGACCAGAGGTGA
ATTGGTATATAAAATAGTGCACAGAATTCAGAATTCTCATCTACTCATTC
AATCGATTTTATATACTGGTGAAGAATTATACAGGATATTTTACAATTAA
TATTCAGACGAGGAATCTCCTGCTCAAACCGAAAGAAGTTTTTGACAATa
TGGGTTTGATTCGCACTTCAACAGCTCTTTTTGCTTTGGTTGTATTGTTT
GTCAACACGAAAGCTACATCACCAGATCCGGCATGCAACATCGACGCCGT
ACTTTACTCCACTCAAACTGACGACATCTACTTCTTTAAAGACGACATGT
ACGCCAGATGGAACGTCAAGTCTGACCGGATGTATTATTACGGACAAACG
AAAGACCTGATCAACGGTTTAAAGACACCTATAGACGCTGTCATCGAGAC
AGACATTTTTGgtactcaaaaaatatttttcttcagcGGCAATCAAGTTC
AAATTTATGATCATTTTCACAAAAGCCCACTCGATACAATCGATTTGAAT
GACTTTGCTGTTGGTCTACCAGAATCAATCGATGCTGTCTTATTCCTTGA
GGGTACCTTCTACTTCTTTAAAGATTACCATATCTACTTCATGGGCATCG
AAAAGAAGATAGTATATGGGCCATTCAATACCTCTGCCATTTTTCTAGGC
CTCAAAAGTCCTGTAGATGCAGCTGTATTGAACACTTTTCATGAAGGCCA
TGAAAGTGCTTACTTATTTAGGAGTGCTTACTTATTTAGCGGTCAGAATT
ATTATCTTACTAACTCAACGGATGAGCTTACTCCTATCGAAAACAGATGG
AAAGGACTATTAGGCTCACCACTCTTTGCCAAATGTGAAATCAATTGCAA
TACTGTCACCATCTCAAACGATGATTGGAAATTTGGGTCAATTTCGTATA
ACATGTCAATGAATGAAACCTATACTCGCTCTATTGGCATCAAAAACTTC
ACCAAGTACACAACAGACCAGGTCCAGATTGATTACAATTTCTCATACAA
CGAATACTTCTCCTTCTTACAAAGCGGTGGCGTGAACGTCAAACAAAACA
CATCTTTCGTTGTCACAACACCAGATTTCTCCAATATCCGTGATTCCATC
AATATCACCAAATTACCAAGTGGTGACAAGCATTATTATTTCAGCTACGG
AATAAAAACAGAACGCGAAGACACGATCAAAGATCACATGCTTTGCACCA
GTGTTATTGGCGATCGAAGAAAATGTACAGTTTTCTTGAATCAATACAAC
ATCCAAGTTCCATATACCATCGTGTGGAATCATAAGGTTAAGAGTGCCTC
GTGCAAATCTCATGGTGTCACTGACATTTTAATTGCTCATATCGGTAAAA
TCAACGAGCCTGCCGCCAAGGATATGAGCGATCGGACTGAACTCTAACCT
ACGTGATAGTTACGTAAAACGTTGTCATGTGTGGTGATTTCCGAAAACtg
tactttttcttttttgatgtttcatagtaacattaatttttttattagaa
tgattgtataataaaaacaaacaatatcattaaagattatttttcaagAA
CAGCAACTCTCCCTGGGGGTATTTAGGCAAGTGGAGGGCacgggtatgtg
ccacccttaaggcTCCCTTTTTTGGACCTTCAAAGTCCCACTATGGGTCG
CAAAAATCACAATTTCCATTTTAAGCCCCCTCCCCCCCCTAAGGATCATA
AAAGAAGTGAAATTATCAATATTTACTCccaaaaaaaaaggatttctgGA
Taaaagtcccactaagggtccgaaaatctaaaaaactcgttttttacgat
ttttcgaaaatcagccGGCACCACCTCGTCATTtggcaaacctagtaccc
ccaaACCCGaatactttcatttttattttaacaatACTTTTTAGGATTCC
TGCATTGGAATTATTGCGCTAATTGTTATCTTTAGAATATGATATATGTC
TTGAACAATAAATAGATTTACATTATAAATGTTCTGTACCTCGTGTTTAT
TAAGGCTTGTCCAAAAAGGACATAACTTTGGTGCAGAAAATTGGGCGCCT
TGGACATATTcatttatacctttaaagaagcgtatCATGATgtagaattc
aaaaatcac Run BLAST on NCBI protein sequence of TCONS_00029199-protein >TCONS_00029199-protein ID=TCONS_00029199-protein|Name=TCONS_00029199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MGLIRTSTALFALVVLFVNTKATSPDPACNIDAVLYSTQTDDIYFFKDDM
YARWNVKSDRMYYYGQTKDLINGLKTPIDAVIETDIFGTQKIFFFSGNQV
QIYDHFHKSPLDTIDLNDFAVGLPESIDAVLFLEGTFYFFKDYHIYFMGI
EKKIVYGPFNTSAIFLGLKSPVDAAVLNTFHEGHESAYLFRSAYLFSGQN
YYLTNSTDELTPIENRWKGLLGSPLFAKCEINCNTVTISNDDWKFGSISY
NMSMNETYTRSIGIKNFTKYTTDQVQIDYNFSYNEYFSFLQSGGVNVKQN
TSFVVTTPDFSNIRDSINITKLPSGDKHYYFSYGIKTEREDTIKDHMLCT
SVIGDRRKCTVFLNQYNIQVPYTIVWNHKVKSASCKSHGVTDILIAHIGK
INEPAAKDMSDRTEL Run BLAST on NCBI transcript from alignment at sc0000728:140777..144460- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029199 ID=TCONS_00029199|Name=TCONS_00029199|organism=Clytia hemisphaerica|type=transcript|length=3684bp|location=Sequence derived from alignment at sc0000728:140777..144460- (Clytia hemisphaerica)
ACAAAAGCTCAAAATGTATTCATATTCTGTTATTAAACTTTAGAATAAAT
ATTTCTTTAATTAATGTAATTGTATATGTTAGCTCTACCTAAACAATGAC
GCAAACTCATTACTATTGATGTCATTTACTTGACTTATTGACCTCTTGAA
GGTTTGGTTTCTCGATATTGTTAAAAAGTACCCGTCCTGACCAGAGGTGA
ATTGGTATATAAAATAGTGCACAGAATTCAGAATTCTCATCTACTCATTC
AATCGATTTTATATACTGGTGAAGAATTATACAGGATATTTTACAATTAA
TATTCAGACGAGGAATCTCCTGCTCAAACCGAAAGAAGTTTTTGACAATG
TAAGTCTCCCATTAACTTATCTTTCATTTATAAAATTTATGCACCTGATT
GGGGAAACGATAACACCTTTTAATATTCGCCGACGCGGTTTTTTTTCCGT
CAACGGACGAAGACCTGATTCAGCGGTCGAAGACCTGATTTAACGGCCGA
AGACCTGATTTAGCAAATCACCGGCCGAATACCTGATATATAAGTTAGGG
TCAGTTAAAGTAGCTTGAACCACTCGTCAAGGCATCAGTTGCGATGGTCC
AGTGGTTCATGCAGTGGTATCGAAGACGAAAGATGGGTAGTTTGAGACGA
GTTATTGGCATTAATTTGCATTCTTTTTAGTTTTACAATCATTTGTTTTC
AATACTATTCCCATTGAAACATCATTTAAAAATCTTGATTGAATTCATAA
AAAAGATTTATAACAAATTTCCAAAATTCATTTTCTCCAGGTCTTCGGCC
GTTAAGAAATATTCGAACGCTGGATCGAGTCTCCAGTTCTTAATTCAGGT
CTCAGGCCGTTAAATCAGGTCTGCGACCGCTAATTTAGGTCTGCGACCAC
TAATTTAGGTCTGCGTCCGTTGACGGAGAAGAAATCTGCTTCGCCGACAA
ACTTAGATAGTCAAAAATTTGATCATTTTCGGGCAAAGTGTTCACTATAT
TGCTTACATTTATCCGCACATATAGTATAAGCCTGTGTTTTGATAAAACA
GAGTAATGAATTTTTTTAAACGTGTCATCTTTTCTTTTTGTGTTTTGAAG
TGGTTTGCTTTGTTTTAGCTACCAGCACAAGTTTACCTGAGTCACAAAAA
GAAGAAAAAAGCTAACTTTGAACCTTTTTACGGTGTTCCATGCTATTCAA
AGTTAATGTCAATTTTTTCACATTTTTCAGATGGGTTTGATTCGCACTTC
AACAGCTCTTTTTGCTTTGGTTGTATTGTTTGTCAACACGAAAGCTACAT
CACCAGATCCGGCATGCAACATCGACGCCGTACTTTACTCCACTCAAACT
GACGACATCTACTTCTTTAAAGACGACATGTACGCCAGATGGAACGTCAA
GTCTGACCGGATGTATTATTACGGACAAACGAAAGACCTGATCAACGGTT
TAAAGACACCTATAGACGCTGTCATCGAGACAGACATTTTTGGTACTCAA
AAAATATTTTTCTTCAGCGGCAATCAAGTTCAAATTTATGATCATTTTCA
CAAAAGCCCACTCGATACAATCGATTTGAATGACTTTGCTGTTGGTCTAC
CAGAATCAATCGATGCTGTCTTATTCCTTGAGGGTACCTTCTACTTCTTT
AAAGATTACCATATCTACTTCATGGGCATCGAAAAGAAGATAGTATATGG
GCCATTCAATACCTCTGCCATTTTTCTAGGCCTCAAAAGTCCTGTAGATG
CAGCTGTATTGAACACTTTTCATGAAGGCCATGAAAGTGCTTACTTATTT
AGGAGTGCTTACTTATTTAGCGGTCAGAATTATTATCTTACTAACTCAAC
GGATGAGCTTACTCCTATCGAAAACAGATGGAAAGGACTATTAGGCTCAC
CACTCTTTGCCAAATGTGAAATCAATTGCAATACTGTCACCATCTCAAAC
GATGATTGGAAATTTGGGTCAATTTCGTATAACATGTCAATGAATGAAAC
CTATACTCGCTCTATTGGTAAGATACAATAGTGTCTTTTAAACCCTTGCG
TTTACCCAAAACCTAAGAAACATTTTTATACTATATTACTGATCCCTAGT
TTTCAGCCCCTGCCTGCCTAATTCTTTGGAGTACCATTACTCGACAGCTG
TTTGTATAATTGAATAAAGGTTGATCTGATTTTCTTTTGATAGAGCGCCG
TTTGACGTCAGGCAAAGCTTTAACACTACAATCAGTTCTTTATGAGTGCA
CTTAAAAAAAATCCGATCAAAGATGCAGGACGAGACTTAGTTTAGGACTC
TTAGGACGTAGTTTTAGTTTGTTAACATTTTACTATTTTATGTCCCTTTA
TATACCTTAAAATACCTAAAATATTTATCACTTTTTTTCCGCAACTCTCT
TGTAATGATCTCCGGAGTTTGAATTAACTTCTTTTTCTCCTTTGTAAAAT
TAAATTACGAGACAATGAACAAAGCCAATGGTAATTTAACTATCGTATTT
TCCACTTTCAGGCATCAAAAACTTCACCAAGTACACAACAGACCAGGTCC
AGATTGATTACAATTTCTCATACAACGAATACTTCTCCTTCTTACAAAGC
GGTGGCGTGAACGTCAAACAAAACACATCTTTCGTTGTCACAACACCAGA
TTTCTCCAATATCCGTGATTCCATCAATATCACCAAATTACCAAGTGGTG
ACAAGCATTATTATTTCAGCTACGGAATAAAAACAGAACGCGAAGACACG
ATCAAAGATCACATGCTTTGCACCAGTGTTATTGGCGATCGAAGAAAATG
TACAGTTTTCTTGAATCAATACAACATCCAAGTTCCATATACCATCGTGT
GGAATCATAAGGTTAAGAGTGCCTCGTGCAAATCTCATGGTGTCACTGAC
ATTTTAATTGCTCATATCGGTAAAATCAACGAGCCTGCCGCCAAGGATAT
GAGCGATCGGACTGAACTCTAACCTACGTGATAGTTACGTAAAACGTTGT
CATGTGTGGTGATTTCCGAAAACTGTACTTTTTCTTTTTTGATGTTTCAT
AGTAACATTAATTTTTTTATTAGAATGATTGTATAATAAAAACAAACAAT
ATCATTAAAGATTATTTTTCAAGAACAGCAACTCTCCCTGGGGGTATTTA
GGCAAGTGGAGGGCACGGGTATGTGCCACCCTTAAGGCTCCCTTTTTTGG
ACCTTCAAAGTCCCACTATGGGTCGCAAAAATCACAATTTCCATTTTAAG
CCCCCTCCCCCCCCTAAGGATCATAAAAGAAGTGAAATTATCAATATTTA
CTCCCAAAAAAAAAGGATTTCTGGATAAAAGTCCCACTAAGGGTCCGAAA
ATCTAAAAAACTCGTTTTTTACGATTTTTCGAAAATCAGCCGGCACCACC
TCGTCATTTGGCAAACCTAGTACCCCCAAACCCGAATACTTTCATTTTTA
TTTTAACAATACTTTTTAGGATTCCTGCATTGGAATTATTGCGCTAATTG
TTATCTTTAGAATATGATATATGTCTTGAACAATAAATAGATTTACATTA
TAAATGTTCTGTACCTCGTGTTTATTAAGGCTTGTCCAAAAAGGACATAA
CTTTGGTGCAGAAAATTGGGCGCCTTGGACATATTCATTTATACCTTTAA
AGAAGCGTATCATGATGTAGAATTCAAAAATCAC Coding sequence (CDS) from alignment at sc0000728:140777..144460- >TCONS_00029199 ID=TCONS_00029199|Name=TCONS_00029199|organism=Clytia hemisphaerica|type=CDS|length=2496bp|location=Sequence derived from alignment at sc0000728:140777..144460- (Clytia hemisphaerica)
GCATCAAAAACTTCACCAAGTACACAACAGACCAGGTCCAGATTGATTAC
AATTTCTCATACAACGAATACTTCTCCTTCTTACAAAGCGGTGGCGTGAA
CGTCAAACAAAACACATCTTTCGTTGTCACAACACCAGATTTCTCCAATA
TCCGTGATTCCATCAATATCACCAAATTACCAAGTGGTGACAAGCATTAT
TATTTCAGCTACGGAATAAAAACAGAACGCGAAGACACGATCAAAGATCA
CATGCTTTGCACCAGTGTTATTGGCGATCGAAGAAAATGTACAGTTTTCT
TGAATCAATACAACATCCAAGTTCCATATACCATCGTGTGGAATCATAAG
GTTAAGAGTGCCTCGTGCAAATCTCATGGTGTCACTGACATTTTAATTGC
TCATATCGGTAAAATCAACGAGCCTGCCGCCAAGGATATGAGCGATCGGA
CTGAACTCTAAATGGGTTTGATTCGCACTTCAACAGCTCTTTTTGCTTTG
GTTGTATTGTTTGTCAACACGAAAGCTACATCACCAGATCCGGCATGCAA
CATCGACGCCGTACTTTACTCCACTCAAACTGACGACATCTACTTCTTTA
AAGACGACATGTACGCCAGATGGAACGTCAAGTCTGACCGGATGTATTAT
TACGGACAAACGAAAGACCTGATCAACGGTTTAAAGACACCTATAGACGC
TGTCATCGAGACAGACATTTTTGGTACTCAAAAAATATTTTTCTTCAGCG
GCAATCAAGTTCAAATTTATGATCATTTTCACAAAAGCCCACTCGATACA
ATCGATTTGAATGACTTTGCTGTTGGTCTACCAGAATCAATCGATGCTGT
CTTATTCCTTGAGGGTACCTTCTACTTCTTTAAAGATTACCATATCTACT
TCATGGGCATCGAAAAGAAGATAGTATATGGGCCATTCAATACCTCTGCC
ATTTTTCTAGGCCTCAAAAGTCCTGTAGATGCAGCTGTATTGAACACTTT
TCATGAAGGCCATGAAAGTGCTTACTTATTTAGGAGTGCTTACTTATTTA
GCGGTCAGAATTATTATCTTACTAACTCAACGGATGAGCTTACTCCTATC
GAAAACAGATGGAAAGGACTATTAGGCTCACCACTCTTTGCCAAATGTGA
AATCAATTGCAATACTGTCACCATCTCAAACGATGATTGGAAATTTGGGT
CAATTTCGTATAACATGTCAATGAATGAAACCTATACTCGCTCTATTGGC
ATCAAAAACTTCACCAAGTACACAACAGACCAGGTCCAGATTGATTACAA
TTTCTCATACAACGAATACTTCTCCTTCTTACAAAGCGGTGGCGTGAACG
TCAAACAAAACACATCTTTCGTTGTCACAACACCAGATTTCTCCAATATC
CGTGATTCCATCAATATCACCAAATTACCAAGTGGTGACAAGCATTATTA
TTTCAGCTACGGAATAAAAACAGAACGCGAAGACACGATCAAAGATCACA
TGCTTTGCACCAGTGTTATTGGCGATCGAAGAAAATGTACAGTTTTCTTG
AATCAATACAACATCCAAGTTCCATATACCATCGTGTGGAATCATAAGGT
TAAGAGTGCCTCGTGCAAATCTCATGGTGTCACTGACATTTTAATTGCTC
ATATCGGTAAAATCAACGAGCCTGCCGCCAAGGATATGAGCGATCGGACT
GAACTCTAAATGGGTTTGATTCGCACTTCAACAGCTCTTTTTGCTTTGGT
TGTATTGTTTGTCAACACGAAAGCTACATCACCAGATCCGGCATGCAACA
TCGACGCCGTACTTTACTCCACTCAAACTGACGACATCTACTTCTTTAAA
GACGACATGTACGCCAGATGGAACGTCAAGTCTGACCGGATGTATTATTA
CGGACAAACGAAAGACCTGATCAACGGTTTAAAGACACCTATAGACGCTG
TCATCGAGACAGACATTTTTGGTACTCAAAAAATATTTTTCTTCAGCGGC
AATCAAGTTCAAATTTATGATCATTTTCACAAAAGCCCACTCGATACAAT
CGATTTGAATGACTTTGCTGTTGGTCTACCAGAATCAATCGATGCTGTCT
TATTCCTTGAGGGTACCTTCTACTTCTTTAAAGATTACCATATCTACTTC
ATGGGCATCGAAAAGAAGATAGTATATGGGCCATTCAATACCTCTGCCAT
TTTTCTAGGCCTCAAAAGTCCTGTAGATGCAGCTGTATTGAACACTTTTC
ATGAAGGCCATGAAAGTGCTTACTTATTTAGGAGTGCTTACTTATTTAGC
GGTCAGAATTATTATCTTACTAACTCAACGGATGAGCTTACTCCTATCGA
AAACAGATGGAAAGGACTATTAGGCTCACCACTCTTTGCCAAATGTGAAA
TCAATTGCAATACTGTCACCATCTCAAACGATGATTGGAAATTTGGGTCA
ATTTCGTATAACATGTCAATGAATGAAACCTATACTCGCTCTATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00029199-exon-sc0000728-1575043694:144112..144460 | TCONS_00029199-exon-sc0000728-1575043694:144112..144460 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1575043694:142444..143230 | TCONS_00029199-exon-sc0000728-1575043694:142444..143230 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1575043694:140777..141949 | TCONS_00029199-exon-sc0000728-1575043694:140777..141949 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1510915933:144112..144460 | TCONS_00029199-exon-sc0000728-1510915933:144112..144460 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1510915933:142444..143230 | TCONS_00029199-exon-sc0000728-1510915933:142444..143230 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1510915933:140777..141949 | TCONS_00029199-exon-sc0000728-1510915933:140777..141949 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1491911889:144112..144460 | TCONS_00029199-exon-sc0000728-1491911889:144112..144460 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1491911889:142444..143230 | TCONS_00029199-exon-sc0000728-1491911889:142444..143230 | Clytia hemisphaerica | exon |
| TCONS_00029199-exon-sc0000728-1491911889:140777..141949 | TCONS_00029199-exon-sc0000728-1491911889:140777..141949 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000728 | supercontig | sc0000728:140777..144460 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR018487 | Hemopexin-like_repeat |
| IPR000585 | Hemopexin-like_dom |
Blast
The following BLAST results are available for this feature:
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