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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029163 ID=TCONS_00029163|Name=TCONS_00029163|organism=Clytia hemisphaerica|type=transcript|length=930bp
CGCATATAATgtattattttaagaaaaagaatcctggtttttttaaatat
tacaaAGAACGACAAGAAACAACAATAGGTAAAGGAAATACCTGAAattc
ttgaatctgaaaatatAAAACTATTTATTGCATTTCTCAAAATGACAGAA
GTTTCGAACGATGGATGATGAAATTTATGTTATGCTTCTTGAAAGCTACG
AAAAAAGTTTCTAGAAATTATAGAAAGTAACTTTTAAATTTATGACAAGG
AAAgctaatttttaatttcagcGTTATAAAATTCTTAGCTCTATCCATTT
AACACATAACAGTCAAGTCAAGTCggactaaaaataaaaaaaatcagtct
ttgTCAAATGATAACTCAAACACATAAGAAATCAAGAATATAAGCCACAT
CATTTAATTTGATATTGAAGACTTCGATGGattcattcaatcaaagttAA
ATTCGCCAAAAAGGTGTTTACTAGGAGCACATTTCGTATCAAGACAAAAG
GTTCTCGCTCGTTTAGTACCGTTTAGTATCGAAGTAATATAGTAATTGAG
TTACGGGTTAGAGACTTTAGTTCCCAAATCTAATTGTGCTTCTAAATAAC
TAATTGCGATCAacgcaaaaataaaaacattgagatttttcaaactgagt
TCCATTTCCTAGCCCGTAAAGTTTCTAAGAGGAATTTATGGTGGTTCAAG
CTTAGACTTCCCATTCTCTCAGTAAATAATTAAAAGCaccaaaaaaatga
aagtttgaaaatatataatacaagtagaAAATGTTGTGTATCAGTGCTTC
AGTAATTGCGTATTAGTCTACATACGCTGTTTTTAACAAGAatattttca
taagaacaaattaagaacaatcctaaTCCTCAAATTTCAGAAACTACTTT
GAAAGTGcggattttaacagattttaaacc Run BLAST on NCBI transcript from alignment at sc0000726:169628..170557 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029163 ID=TCONS_00029163|Name=TCONS_00029163|organism=Clytia hemisphaerica|type=transcript|length=930bp|location=Sequence derived from alignment at sc0000726:169628..170557 (Clytia hemisphaerica)
ggtttaaaatctgttaaaatccgCACTTTCAAAGTAGTTTCTGAAATTTG
AGGAttaggattgttcttaatttgttcttatgaaaatatTCTTGTTAAAA
ACAGCGTATGTAGACTAATACGCAATTACTGAAGCACTGATACACAACAT
TTtctacttgtattatatattttcaaactttcatttttttggtGCTTTTA
ATTATTTACTGAGAGAATGGGAAGTCTAAGCTTGAACCACCATAAATTCC
TCTTAGAAACTTTACGGGCTAGGAAATGGAactcagtttgaaaaatctca
atgtttttatttttgcgtTGATCGCAATTAGTTATTTAGAAGCACAATTA
GATTTGGGAACTAAAGTCTCTAACCCGTAACTCAATTACTATATTACTTC
GATACTAAACGGTACTAAACGAGCGAGAACCTTTTGTCTTGATACGAAAT
GTGCTCCTAGTAAACACCTTTTTGGCGAATTTaactttgattgaatgaat
CCATCGAAGTCTTCAATATCAAATTAAATGATGTGGCTTATATTCTTGAT
TTCTTATGTGTTTGAGTTATCATTTGAcaaagactgattttttttatttt
tagtccGACTTGACTTGACTGTTATGTGTTAAATGGATAGAGCTAAGAAT
TTTATAACgctgaaattaaaaattagcTTTCCTTGTCATAAATTTAAAAG
TTACTTTCTATAATTTCTAGAAACTTTTTTCGTAGCTTTCAAGAAGCATA
ACATAAATTTCATCATCCATCGTTCGAAACTTCTGTCATTTTGAGAAATG
CAATAAATAGTTTTatattttcagattcaagaatTTCAGGTATTTCCTTT
ACCTATTGTTGTTTCTTGTCGTTCTttgtaatatttaaaaaaaccaggat
tctttttcttaaaataatacATTATATGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029163-exon-sc0000726-1491911889:169628..170557 | TCONS_00029163-exon-sc0000726-1491911889:169628..170557 | Clytia hemisphaerica | exon |
| TCONS_00029163-exon-sc0000726-1510915933:169628..170557 | TCONS_00029163-exon-sc0000726-1510915933:169628..170557 | Clytia hemisphaerica | exon |
| TCONS_00029163-exon-sc0000726-1575043694:169628..170557 | TCONS_00029163-exon-sc0000726-1575043694:169628..170557 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000726 | supercontig | sc0000726:169628..170557 . |
Blast
The following BLAST results are available for this feature:
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