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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029130 ID=TCONS_00029130|Name=TCONS_00029130|organism=Clytia hemisphaerica|type=transcript|length=362bp
TGGTGGGCAAAAATTTACTTCACGTGGAACTGGTAAAAGAGCTTCCTAaa
ttTATTCAGGCATCTTCCCCAACAGAGGAGACTgtcaaatgatgaaaaaa
aaaaggcaACACACATGATGGATCTCCAGGTCAACAAAAAAATGCTGAAG
AACCAAATTCAAGCGGAGACTGGTAAGGTGGTTCTTCTGAAAGATTTGAG
TAACCTGGCGCAAAAGAGTCAGAACAAAGATACATTTGATGATGTCATAA
ATATGCTAAGAAACCAATATGGTTGCACTGTGGAAATGAACGTGAGTGAA
AATGGAGATTTTATCGGGCTCTTCTTTCAGGACGAGGTAATGAAGAaaga
ttttgcttcatt Run BLAST on NCBI transcript from alignment at sc0000726:1037..3201+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029130 ID=TCONS_00029130|Name=TCONS_00029130|organism=Clytia hemisphaerica|type=transcript|length=2165bp|location=Sequence derived from alignment at sc0000726:1037..3201+ (Clytia hemisphaerica)
TGGTGGGCAAAAATTTACTTCACGTGGAACTGGTAAAAGAGCTTCCTAGT
AAGTTTGATTATTATCTTTCGCTACTGTAATCAATTTTCAGCCTTCTAGG
ATTATTCACACTCAACCTAtaattaagcaaaaaaaaacccaGCAATATGG
AGCTTGGATTTCGTCATCCCCCGGGGGagaggggtactagggcaaaaaaA
GGTACAGGGaggctccgctggtcagggtacctttttcacctccaccagtc
ccacgtagggtcgcaaaaacaccaaaatagaaaaatcagtcccttgTAGG
GTAgctattttggaaattttgggacgaaatctggaaattttgagaaaatc
tNaaaatagaaaaatcagtcccttgTAGGGTAgctattttggaaattttg
ggacgaaatctggaaattttgagaaaatctggaaattttgagaaaatttg
ggaattttagtcccattcagggtcactttttttgcaaaaaatgagTCCCA
TGTAGGGTCCgcttttcgaacctcagcggaccACCCctgtcggtcggcaa
gggtagtacccccctccCGGGCGTCATGCTAAATGATATCCTTTCAATGG
AATCAGTCTAATTTCATTTGCTTGGTTTCCAtgttaataacaaaaaaaca
gtGTGACAACTTgattttggttttgattttttctagtACTTTGAAGTCAG
ACTGCCCATTCTTCGTTAGACTAAGGTTATCCAAGAATGTCCATCATTTG
GAAGTCAAAGAAATTCTTAATGAACATAACCATGATCTCAATGAGGTAAT
CACTCAGTTATTTATCAATGATTTGTATAACCGGACTTGTTAAACAATTT
CAATTAGTTTTTGTTTATAAgttgcaaattttggaattagaATTTTTCCT
TAATAGGTCAGCAATCTTTGCAAAAAATAGAATCCATGTATAAAACTTAC
TTGCCAGTACCCGGCATCGCACATTGGTTGCTGAATGCAATTAAAGTTCT
TTGGATGCTAAATTTTGTCCCCCGAGAGTTATCTTCCCCCTTCAAAGCAT
TTAATAATTATCTTAAACCTTTTTGCGTTATGTGGTGCAATACCAAAAAG
AAGGTAACTTTATTAACAGAAATATTGTTGGTATTTGTAACAAAAACATT
CAATACAATGTAATTGTTTTCACAAGCTGAAAGAACTTTCattatctttg
ttaaaaaaaattcaatccaTCAGAATCCATCCAAGCACCAGAGTAGGTTT
CAGTGTATACCATGAAAGTGTTGCAAATCTGATGTCCAATTCTTCAACAA
TGATTTGATTTAATGTAACGCAACTaccacttcttttttttttctcaaag
aattTATTCAGGCATCTTCCCCAACAGAGGAGACTgtcaaatgatgaaaa
aaaaggcAATNTTTGATTTAATGTAACGCAACCAccacttattttttttt
ctcaaagaattTATTCAGGCATCTTCCCCAACAGAGGAGACTgtcaaatg
atgaaaaaaaaaaggcaACACACATGATGGATCTCCAGGTCAACAAAAAA
ATGCTGAAGAACCAAATTCAAGCGGAGACTGGTAAGGTGGTTCTTCTGAA
AGATTTGAGTAACCTGGCGCAAAAGAGTCAGAACAAAGATACATTTGATG
ATGTCATAAATATGCTAAGAAACCAATATGGTATGTATTTCATTAGCTTT
TCAATGAGTACAGAAATTTCCTGTATTGTATGTTTGAAATAAGCGTATAT
CTAGAATTTAAGAAGTAAGCTTGATTGCTGGCACTAAGTATTCCTTTAGT
TGTTTCTGCATAAACCATATTGTCAGTATAAAGTGTCTCAAATTAGTGAG
TATTTTAGTATataaaaatcacaactttttttGCATGCCAAGATTCGCTT
TCCAATATCATTCTTTGCACTTATGGAAATATGAGTCATCAGGATTTTCA
CATAAAGCAGAATATTGACCACTTTATTCAAGACACACCGTATATCAAAG
TCAGATATTAAACTTGATTTGTTAAGGGAATGATGTGTAGCTTATTGTGA
CGATGACAACCTTCCTTCTTTTAGGTTGCACTGTGGAAATGAACGTGAGT
GAAAATGGAGATTTTATCGGGCTCTTCTTTCAGGACGAGGTAATGAAGAa
agattttgcttcatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029130-exon-sc0000726-1491911889:1037..1084 | TCONS_00029130-exon-sc0000726-1491911889:1037..1084 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1510915933:1037..1084 | TCONS_00029130-exon-sc0000726-1510915933:1037..1084 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1575043694:1037..1084 | TCONS_00029130-exon-sc0000726-1575043694:1037..1084 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1491911889:2494..2716 | TCONS_00029130-exon-sc0000726-1491911889:2494..2716 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1510915933:2494..2716 | TCONS_00029130-exon-sc0000726-1510915933:2494..2716 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1575043694:2494..2716 | TCONS_00029130-exon-sc0000726-1575043694:2494..2716 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1491911889:3111..3201 | TCONS_00029130-exon-sc0000726-1491911889:3111..3201 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1510915933:3111..3201 | TCONS_00029130-exon-sc0000726-1510915933:3111..3201 | Clytia hemisphaerica | exon |
| TCONS_00029130-exon-sc0000726-1575043694:3111..3201 | TCONS_00029130-exon-sc0000726-1575043694:3111..3201 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000726 | supercontig | sc0000726:1037..3201 + |
Blast
The following BLAST results are available for this feature:
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