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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029107 ID=TCONS_00029107|Name=TCONS_00029107|organism=Clytia hemisphaerica|type=transcript|length=942bp
TGCGTTGTAATTTCATAATGATTTCATATAGCGCGTCGGCGTTATTGCAT
CAGCCGTTATCTCCCTTATATTGCGCCACCTCTTCCGAAGCGTACTGTGG
ACAATTTTCTGAAATGTTTGAGTAGATTCGCAGTAGTAGCTGGCTAAGTT
GTTTCACAAACGTGATGGTTGAATGGCTGGAAGAAGAGTTCAAGCAGTCT
CAACTTTCATCATATCTTGAGGTTGAGGTGAGAGTTTATTGATTCCTTgt
caaagttattttcaaaaaagatagcaTATTCAtagtttatattttctttt
ttgcatattataaatcaaaatttactaAAAATGAACACTCAAATCTCTCT
GTTGATTGACAAAAGACAGAAAGAATAATGGACAAAATGTATATATGAAT
GAATTTGGtgttgaaatgaaaatgttggTAATTCGTTGATTGTTTATTGT
TGTTTTAGTATCTGGTGTTACATGTTTATAGTATCGAAGAAGTCCATGGC
TTTACATCGTCCTTGAGCTTGGTATTACCATCGCCtttctgtttttgttg
ttgGTTCGTTTCTTCACACCTGAATACTGCACCGAAAGAGTTCATAAAAG
TGATAGGTAAGCTAAAGGTCTCTTTTTGATCCATCAAAATTTGCTAACGC
AGACACTTTAACGTGTGTTTCTAGGTATATCTTAGAAAGCAATCATTTTA
TAGTCCTTCCATTTTCATTTGAATAATGTCTTTTTACGAGGTTCAATTAT
TCGTCCAGCCATCTCTCAAAGAACGTTAAAAATCTATGATAGTCTTTTGT
CTCAATGAAAGAATAAAAGGGATTTGTTAGCTAGTTTGCAAGCGTTCTGT
TTCATTACTTTAACAtacaaaatatttgataaaaagtaTACTGGTATAGG
ACTATACCTTAAGCAATTAATCATGAATGATCTAAGTTTTAA Run BLAST on NCBI transcript from alignment at sc0000724:109803..110744- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029107 ID=TCONS_00029107|Name=TCONS_00029107|organism=Clytia hemisphaerica|type=transcript|length=942bp|location=Sequence derived from alignment at sc0000724:109803..110744- (Clytia hemisphaerica)
TGCGTTGTAATTTCATAATGATTTCATATAGCGCGTCGGCGTTATTGCAT
CAGCCGTTATCTCCCTTATATTGCGCCACCTCTTCCGAAGCGTACTGTGG
ACAATTTTCTGAAATGTTTGAGTAGATTCGCAGTAGTAGCTGGCTAAGTT
GTTTCACAAACGTGATGGTTGAATGGCTGGAAGAAGAGTTCAAGCAGTCT
CAACTTTCATCATATCTTGAGGTTGAGGTGAGAGTTTATTGATTCCTTGT
CAAAGTTATTTTCAAAAAAGATAGCATATTCATAGTTTATATTTTCTTTT
TTGCATATTATAAATCAAAATTTACTAAAAATGAACACTCAAATCTCTCT
GTTGATTGACAAAAGACAGAAAGAATAATGGACAAAATGTATATATGAAT
GAATTTGGTGTTGAAATGAAAATGTTGGTAATTCGTTGATTGTTTATTGT
TGTTTTAGTATCTGGTGTTACATGTTTATAGTATCGAAGAAGTCCATGGC
TTTACATCGTCCTTGAGCTTGGTATTACCATCGCCTTTCTGTTTTTGTTG
TTGGTTCGTTTCTTCACACCTGAATACTGCACCGAAAGAGTTCATAAAAG
TGATAGGTAAGCTAAAGGTCTCTTTTTGATCCATCAAAATTTGCTAACGC
AGACACTTTAACGTGTGTTTCTAGGTATATCTTAGAAAGCAATCATTTTA
TAGTCCTTCCATTTTCATTTGAATAATGTCTTTTTACGAGGTTCAATTAT
TCGTCCAGCCATCTCTCAAAGAACGTTAAAAATCTATGATAGTCTTTTGT
CTCAATGAAAGAATAAAAGGGATTTGTTAGCTAGTTTGCAAGCGTTCTGT
TTCATTACTTTAACATACAAAATATTTGATAAAAAGTATACTGGTATAGG
ACTATACCTTAAGCAATTAATCATGAATGATCTAAGTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029107-exon-sc0000724-1575043694:109803..110744 | TCONS_00029107-exon-sc0000724-1575043694:109803..110744 | Clytia hemisphaerica | exon |
| TCONS_00029107-exon-sc0000724-1510915933:109803..110744 | TCONS_00029107-exon-sc0000724-1510915933:109803..110744 | Clytia hemisphaerica | exon |
| TCONS_00029107-exon-sc0000724-1491911889:109803..110744 | TCONS_00029107-exon-sc0000724-1491911889:109803..110744 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000724 | supercontig | sc0000724:109803..110744 - |
Blast
The following BLAST results are available for this feature:
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