TCONS_00029007 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029007
Unique NameTCONS_00029007
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length637

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029007 ID=TCONS_00029007|Name=TCONS_00029007|organism=Clytia hemisphaerica|type=transcript|length=637bp
ggcctctttAAAAGTAAGGCTCTCAAGACTTAAATCTATCAGACAactga
aatttttaaatatagtGCAATTGGAACTTAACAGTGCAGAAAAGCGAATC
TTTTAAATAGTGAATCACAAAAGTGGCATATTAATAAAATACTACAAAAA
TGACttccatttcaaaaaataagaggaaaaatatagagtactggatataa
agttgaaaaaatgtcaaattttctaaatgttcatatttttgttgaattaa
attgttaataaaaaaattaccaCTGTCCCAGCCACAATGATACTGATAAA
ATGTTTGCATTTTGTACTTGTTGGTATCTAAGTAAGAAATGTAATAATGC
TTTATATATCTGATAATTTCAGAGCCAAAAAGAATAAAGTTGATTCAAGT
GACTGAAGGCAATGCTAATGTGACAACTCTAACTCAATTGGTGAGAGAGA
AATTTGGGATGGATACACTGCAATGTATCAATGTAAAAATTCTGAAGTCA
AAACCTTACTTAATACCGTAGAACTGCCTTATAATCTAAAAGTTTGCTCA
AATCACAGACCAGAAATGTTTTCTGTTTTAAAGTGATAAAAGTTGCTCTT
TTTTATGATACGAGTTCATAGGTGATTCGCTTCACCT
Run BLAST on NCBI

transcript from alignment at sc0000719:118480..119116

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029007 ID=TCONS_00029007|Name=TCONS_00029007|organism=Clytia hemisphaerica|type=transcript|length=637bp|location=Sequence derived from alignment at sc0000719:118480..119116 (Clytia hemisphaerica)
AGGTGAAGCGAATCACCTATGAACTCGTATCATAAAAAAGAGCAACTTTT ATCACTTTAAAACAGAAAACATTTCTGGTCTGTGATTTGAGCAAACTTTT AGATTATAAGGCAGTTCTACGGTATTAAGTAAGGTTTTGACTTCAGAATT TTTACATTGATACATTGCAGTGTATCCATCCCAAATTTCTCTCTCACCAA TTGAGTTAGAGTTGTCACATTAGCATTGCCTTCAGTCACTTGAATCAACT TTATTCTTTTTGGCTCTGAAATTATCAGATATATAAAGCATTATTACATT TCTTACTTAGATACCAACAAGTACAAAATGCAAACATTTTATCAGTATCA TTGTGGCTGGGACAGtggtaatttttttattaacaatttaattcaacaaa aatatgaacatttagaaaatttgacattttttcaactttatatccagtac tctatatttttcctcttattttttgaaatggaaGTCATTTTTGTAGTATT TTATTAATATGCCACTTTTGTGATTCACTATTTAAAAGATTCGCTTTTCT GCACTGTTAAGTTCCAATTGCactatatttaaaaatttcagtTGTCTGAT AGATTTAAGTCTTGAGAGCCTTACTTTTaaagaggcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016490XLOC_016490Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029007-exon-sc0000719-1491911889:118480..119116TCONS_00029007-exon-sc0000719-1491911889:118480..119116Clytia hemisphaericaexon
TCONS_00029007-exon-sc0000719-1510915933:118480..119116TCONS_00029007-exon-sc0000719-1510915933:118480..119116Clytia hemisphaericaexon
TCONS_00029007-exon-sc0000719-1575043694:118480..119116TCONS_00029007-exon-sc0000719-1575043694:118480..119116Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000719supercontigsc0000719:118480..119116 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029007 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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